The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789761

Identifier: 91789761

GI number: 91789761

Start: 4114543

End: 4115226

Strand: Reverse

Name: 91789761

Synonym: Bpro_3920

Alternate gene names: NA

Gene position: 4115226-4114543 (Counterclockwise)

Preceding gene: 91789762

Following gene: 91789760

Centisome position: 79.13

GC content: 66.81

Gene sequence:

>684_bases
ATGGACGCAGTCACCCCCTTTCAAGCCGGCGGCAACACGGCCCGGCGCCCGCGCGGCCGGCCGCGCAAGACGCTGGGCGA
ACGCGACGACGGCAACCGCCGCATGGAGCTGGTCAGCGCCGCGGCGAAGCTGTTTCGCCGCAAGGGATTTGACGGCGCCA
GCACCCGCGACATCGCGGCCGCGGTGGGCATGCACAGCGGCTCGCCCTTTTATCACTTCAAGAGCAAGGGGGCACTGCTT
CACGCGGTGATGGAGCAGGGCATGCGTTCGGCCCTGGACCGGCAGACCGCGGCCCTGCAGTCTGCCAGCCAATCAAAGTT
CGATGCGTCTTCCTTGCTGCGCGTGCTGATCCGCAACCACTTCGATGTGCTGCTGGGGCCCGGCAGTGACTTCATTCCGG
TGATGCTGTACGAGTCACGCTCCCTCACGGCGCGGCAGCGTGCGTCCATCGCCCGGCTGCGAAGCGACTATGAGTCGAAC
TGGGAGCCGGTGCTCGAGGCCCTGGCCGAACAGGGCCGGCTCCACGGGCCGGTGACGCTGGCGCGCCTGTTGATCTTCGG
TGCGCTGAACTGGTCGGTCCAGTGGTTTGACGCAAAAAAAGACGCGTCGCTGGATGACCTGACCGACGCGGCCCTGGCAC
TGTTTCTGCACGCCCCGATGCGGGCCCGAAAAGTCACTGCATGA

Upstream 100 bases:

>100_bases
CGGGGCTGTCCGAGGGAAGCGCGACCTCGGCCGTTGCCCTCCTTATTTTTACCAAGCATTTGCTTGTTAAAAATAAGGCG
TTTTGGTATGGTGCTGAACC

Downstream 100 bases:

>100_bases
CCATCAATACCATGACCCGATCTTCACCCCACCCCAAGCCTTCAGTTTTCGAATTTGAGGAAGAGTTCATCACCGGCCTG
ACAAGCATGTTTGAAGAGAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulator TetR/AcrR Families

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAAAVGMHSGSPFYHFKSKGALL
HAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNHFDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESN
WEPVLEALAEQGRLHGPVTLARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA

Sequences:

>Translated_227_residues
MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAAAVGMHSGSPFYHFKSKGALL
HAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNHFDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESN
WEPVLEALAEQGRLHGPVTLARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA
>Mature_227_residues
MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAAAVGMHSGSPFYHFKSKGALL
HAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNHFDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESN
WEPVLEALAEQGRLHGPVTLARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25021; Mature: 25021

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: PS50977 HTH_TETR_2 ; PS00354 HMGI_Y

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAA
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AVGMHSGSPFYHFKSKGALLHAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNH
HHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
FDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESNWEPVLEALAEQGRLHGPVTL
CCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
ARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA
HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC
>Mature Secondary Structure
MDAVTPFQAGGNTARRPRGRPRKTLGERDDGNRRMELVSAAAKLFRRKGFDGASTRDIAA
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
AVGMHSGSPFYHFKSKGALLHAVMEQGMRSALDRQTAALQSASQSKFDASSLLRVLIRNH
HHHCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC
FDVLLGPGSDFIPVMLYESRSLTARQRASIARLRSDYESNWEPVLEALAEQGRLHGPVTL
CCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHH
ARLLIFGALNWSVQWFDAKKDASLDDLTDAALALFLHAPMRARKVTA
HHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA