| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yigI [H]
Identifier: 91789760
GI number: 91789760
Start: 4114037
End: 4114546
Strand: Reverse
Name: yigI [H]
Synonym: Bpro_3919
Alternate gene names: 91789760
Gene position: 4114546-4114037 (Counterclockwise)
Preceding gene: 91789761
Following gene: 91789751
Centisome position: 79.12
GC content: 60.59
Gene sequence:
>510_bases ATGACCATCAATACCATGACCCGATCTTCACCCCACCCCAAGCCTTCAGTTTTCGAATTTGAGGAAGAGTTCATCACCGG CCTGACAAGCATGTTTGAAGAGAAAATTGTTTTCAACCGGGTGCTGGGCCTGAAGATCACGTCGCTCAAGGCCGAGCGCG TCACGGCACGCATTGACATGCGGCACGAACTGGTGGGCCACTACGCCTACAACCGCATTCACGGCGGCGTGATCAGCGCC AGCCTGGATGCCATGGGCGGGCTCGCCGTGATGGCGGCGATCGGGGCGCGCCACATGGACGAAGCTCCGCTGCAGCGGCT GCACCGATTTTCCAGGCTGGGCACGATTGACCTGCGGGTGGACTATTTGCGCCCGGGCATCAGCGACTACTTTGAACTGC GGGCCGAAGTGTTGCGCCTGGGGTCGCGGGTGGCCAATACGCGCATGGAGTTTCTGGGGGCGGACGGAACGCTTTTTTCC AGCGCTGCGGCCGCCTATATCGTGTCCTGA
Upstream 100 bases:
>100_bases AGTGGTTTGACGCAAAAAAAGACGCGTCGCTGGATGACCTGACCGACGCGGCCCTGGCACTGTTTCTGCACGCCCCGATG CGGGCCCGAAAAGTCACTGC
Downstream 100 bases:
>100_bases ATTTTCTGCTTCGGTTTCTGCTGCAAGCGGCGGTGTGTCCCTGAAAATGGCCCGTCAAGAGGCCAGTCAAAAGGTTCGTC AAAAGGCTAGTCACTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTINTMTRSSPHPKPSVFEFEEEFITGLTSMFEEKIVFNRVLGLKITSLKAERVTARIDMRHELVGHYAYNRIHGGVISA SLDAMGGLAVMAAIGARHMDEAPLQRLHRFSRLGTIDLRVDYLRPGISDYFELRAEVLRLGSRVANTRMEFLGADGTLFS SAAAAYIVS
Sequences:
>Translated_169_residues MTINTMTRSSPHPKPSVFEFEEEFITGLTSMFEEKIVFNRVLGLKITSLKAERVTARIDMRHELVGHYAYNRIHGGVISA SLDAMGGLAVMAAIGARHMDEAPLQRLHRFSRLGTIDLRVDYLRPGISDYFELRAEVLRLGSRVANTRMEFLGADGTLFS SAAAAYIVS >Mature_168_residues TINTMTRSSPHPKPSVFEFEEEFITGLTSMFEEKIVFNRVLGLKITSLKAERVTARIDMRHELVGHYAYNRIHGGVISAS LDAMGGLAVMAAIGARHMDEAPLQRLHRFSRLGTIDLRVDYLRPGISDYFELRAEVLRLGSRVANTRMEFLGADGTLFSS AAAAYIVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082336, Length=147, Percent_Identity=35.3741496598639, Blast_Score=94, Evalue=7e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003736 - InterPro: IPR006683 [H]
Pfam domain/function: PF03061 4HBT [H]
EC number: NA
Molecular weight: Translated: 18820; Mature: 18689
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINTMTRSSPHPKPSVFEFEEEFITGLTSMFEEKIVFNRVLGLKITSLKAERVTARIDM CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHH RHELVGHYAYNRIHGGVISASLDAMGGLAVMAAIGARHMDEAPLQRLHRFSRLGTIDLRV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEE DYLRPGISDYFELRAEVLRLGSRVANTRMEFLGADGTLFSSAAAAYIVS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure TINTMTRSSPHPKPSVFEFEEEFITGLTSMFEEKIVFNRVLGLKITSLKAERVTARIDM CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHH RHELVGHYAYNRIHGGVISASLDAMGGLAVMAAIGARHMDEAPLQRLHRFSRLGTIDLRV HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEE DYLRPGISDYFELRAEVLRLGSRVANTRMEFLGADGTLFSSAAAAYIVS HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]