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The map label for this gene is potC [H]

Identifier: 91789731

GI number: 91789731

Start: 4082221

End: 4083081

Strand: Direct

Name: potC [H]

Synonym: Bpro_3889

Alternate gene names: 91789731

Gene position: 4082221-4083081 (Clockwise)

Preceding gene: 91789730

Following gene: 91789732

Centisome position: 78.5

GC content: 64.69

Gene sequence:

>861_bases
ATGATCGCCTCCCTGCCCCGCCCGGCCTGGCTGCGCGCCGGCACGGTGGTGTATGCCCTGGCCTTTTTCGCCTTCCTGTT
CCTGCCGCTGGCGGTGGTGGCGGTGTTCGCCTTCAACGACGCGCCCTATCCCGCCCCGCCCTGGCGCGGCTTCACGCTGG
ACTGGTTTTTTGGCAGCAAGGCCGGCCGCACCGGGCTGTTTTCGGACGGGCCGCTGCTGGCCAGCCTCTGGACCAGCGTG
GTGGTGGCGGGCTGGGTCACGCTGCTGGCGGTTCTGGTGGGTACCACCAACGCCTTTTTGATTGAGCGCAGCCGGTTTCC
GGGCAAGCAGGCCCTGTCTTTGCTGATGCTGGCCCCGCTGGTGATTCCGGGCGTGATTCTGGGCATCTCGATACTGGCCT
TTGCCAGCCGGATGGCGCAATTTGCAGACGACATATGGGGCCTTGAGCTTGATTTTCTGCGCCCCGGCCTGCCGCTGGTG
GTGCTGGGCCAGTTTTCGTACATCGTGTCCATTGCCACCCTCATCATCACGGCGCGCCTCAAACGCTTCGACATCACCCT
GGAAGAAGCTGCTTACAACCTCGGCGCCTCGCGCGCAGCGGTCTTTGCCACCATCACGCTGCCGGCGCTCAAACCGGCCC
TGGTAGGCGCTGCGGCCATTTCATTTTTGATGTCTTTTGAGAACTTCAACACCACGCTGATGCTGGTGGGTTCGGACGCG
CCGCTCACCGTCATGATGTATGGGCGCATGCGCGAAGGCGCCACCCCGGTCCTGAACGCCGTCAGCCTGTTTCTGATGCT
CGCCTCTGCCGCGCTGGCACTCACGCTGCTGCGCAAGCCAGCCATCGGCGGGGCAGCCTGA

Upstream 100 bases:

>100_bases
GGCGACATCTGCGGCCCGGCAAAGCCGGTTCCGCGATGTCACTGGCATTTCACCGCCTGCGCCAACACTGCGGGTGCGCA
TCAGGCTGGGGAATCATCGA

Downstream 100 bases:

>100_bases
GACGCCTGGCGGCCAGCTGTGCCAACCCCGCCTGAGGCGGGAGTCGACACGCCCATAAAACCGCCTGTTACAGCGGCCTC
GTGCGAATACCCAAATACGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MIASLPRPAWLRAGTVVYALAFFAFLFLPLAVVAVFAFNDAPYPAPPWRGFTLDWFFGSKAGRTGLFSDGPLLASLWTSV
VVAGWVTLLAVLVGTTNAFLIERSRFPGKQALSLLMLAPLVIPGVILGISILAFASRMAQFADDIWGLELDFLRPGLPLV
VLGQFSYIVSIATLIITARLKRFDITLEEAAYNLGASRAAVFATITLPALKPALVGAAAISFLMSFENFNTTLMLVGSDA
PLTVMMYGRMREGATPVLNAVSLFLMLASAALALTLLRKPAIGGAA

Sequences:

>Translated_286_residues
MIASLPRPAWLRAGTVVYALAFFAFLFLPLAVVAVFAFNDAPYPAPPWRGFTLDWFFGSKAGRTGLFSDGPLLASLWTSV
VVAGWVTLLAVLVGTTNAFLIERSRFPGKQALSLLMLAPLVIPGVILGISILAFASRMAQFADDIWGLELDFLRPGLPLV
VLGQFSYIVSIATLIITARLKRFDITLEEAAYNLGASRAAVFATITLPALKPALVGAAAISFLMSFENFNTTLMLVGSDA
PLTVMMYGRMREGATPVLNAVSLFLMLASAALALTLLRKPAIGGAA
>Mature_286_residues
MIASLPRPAWLRAGTVVYALAFFAFLFLPLAVVAVFAFNDAPYPAPPWRGFTLDWFFGSKAGRTGLFSDGPLLASLWTSV
VVAGWVTLLAVLVGTTNAFLIERSRFPGKQALSLLMLAPLVIPGVILGISILAFASRMAQFADDIWGLELDFLRPGLPLV
VLGQFSYIVSIATLIITARLKRFDITLEEAAYNLGASRAAVFATITLPALKPALVGAAAISFLMSFENFNTTLMLVGSDA
PLTVMMYGRMREGATPVLNAVSLFLMLASAALALTLLRKPAIGGAA

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine and spermidine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787714, Length=248, Percent_Identity=31.4516129032258, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787081, Length=253, Percent_Identity=26.4822134387352, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787368, Length=265, Percent_Identity=26.7924528301887, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1788764, Length=198, Percent_Identity=29.2929292929293, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30503; Mature: 30503

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIASLPRPAWLRAGTVVYALAFFAFLFLPLAVVAVFAFNDAPYPAPPWRGFTLDWFFGSK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
AGRTGLFSDGPLLASLWTSVVVAGWVTLLAVLVGTTNAFLIERSRFPGKQALSLLMLAPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH
VIPGVILGISILAFASRMAQFADDIWGLELDFLRPGLPLVVLGQFSYIVSIATLIITARL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
KRFDITLEEAAYNLGASRAAVFATITLPALKPALVGAAAISFLMSFENFNTTLMLVGSDA
HHHCCCHHHHHHHCCCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
PLTVMMYGRMREGATPVLNAVSLFLMLASAALALTLLRKPAIGGAA
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MIASLPRPAWLRAGTVVYALAFFAFLFLPLAVVAVFAFNDAPYPAPPWRGFTLDWFFGSK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
AGRTGLFSDGPLLASLWTSVVVAGWVTLLAVLVGTTNAFLIERSRFPGKQALSLLMLAPL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHH
VIPGVILGISILAFASRMAQFADDIWGLELDFLRPGLPLVVLGQFSYIVSIATLIITARL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHH
KRFDITLEEAAYNLGASRAAVFATITLPALKPALVGAAAISFLMSFENFNTTLMLVGSDA
HHHCCCHHHHHHHCCCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
PLTVMMYGRMREGATPVLNAVSLFLMLASAALALTLLRKPAIGGAA
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]