| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789722
Identifier: 91789722
GI number: 91789722
Start: 4072458
End: 4073972
Strand: Reverse
Name: 91789722
Synonym: Bpro_3880
Alternate gene names: NA
Gene position: 4073972-4072458 (Counterclockwise)
Preceding gene: 91789723
Following gene: 91789721
Centisome position: 78.34
GC content: 61.32
Gene sequence:
>1515_bases ATGGATCTCATTGCAAATTTGTCGCTGGGCTTTGGCGTGGCTTTCACGCCGATCAACCTGCTATACGCGCTGGCTGGCTG TATCCTGGGTACGCTGATCGGTGTTCTGCCCGGCATCGGCCCGGTGGCCACCATTGCCATGCTGCTGCCGGCCACCTACG CCTTGCCGCCGGTGTCCGCGCTGATCATGCTGGCCGGTATTTATTACGGTGCCCAGTACGGTGGCTCGACCACCGCCATT CTGGTGAACCTGCCGGGCGAGTCTTCCTCGGTGGTGACCTGTATTGACGGCTACCAGATGGCCCGAAAAGGCCGAGCGGG GCCAGCGCTGGCCGCTGCCGGACTGGGTTCGTTCTTCGCCGGTTGCGTGGGCACGCTGGTCCTGGCGGCCTTTGCACCGC CGCTGACCGAACTGGCTTTCAAGTTTGGCCCTGCCGAGTATTTCTCGCTGATGGTGCTGGGCCTGATTGGTGCGGTGGTG TTGGCATCGGGCTCGTTGCTCAAGGCGGTCGCCATGATTGTGCTGGGCCTGTTGCTTGGTCTCATCGGCACCGACGTGAA TTCGGGCGTGGCTCGCTTCAGTTTCGATGTGCCTGAGTTGACCGACGGTATCGGCTTTGTCGTGATTGCCATGGGCGTCT TCGGCTACGGCGAGATCATCAGCAACCTGGCGCAGCCCGAGCATGAGCGCGAAGTGTTCACCGCCAAGGTGTCGGGCCTG TTTCCGACGAAACAGGATTTCAAGGATATGGTGCCGGCCATGCTGCGCGGTACCTTGCTCGGTTCGTCCCTCGGGATTTT GCCCGGTGGTGGCGCACTGCTGTCTGCTTTTGCCGCCTATGCGCTGGAAAAGAAATTGAAGATGAAGCCGGGCGAAGTTC CCTTCGGCCAGGGCAACATCCGCGGTGTGGCCGGTCCTGAGTCGGCCAACAATGCCGGCGCGCAGACCTCGTTTATTCCG CTGCTGACCCTGGGTATTCCGCCGAACGCCGTGATGGCGCTGATGGTGGGCGCCATGACGATCCACAACATCCAGCCAGG CCCGCAGGTGATGACCAGCAACCCCGAGCTGTTCTGGGGCCTGATCGCCTCGATGTGGATCGGCAACGCGATGCTGATCA TCCTGAACCTGCCGCTGATCGGCATGTGGATCAAGCTGCTGACGGTGCCTTACCGCTACCTGTTCCCGGCGATTGTGCTG TTCTGTGCGATTGGTGTGTACTCCACCAACAACAACACCTGGGACATCTGGATGGTGGGTATTTTTGGCGTGATCGGCTA CATCTTCGTCAAGTTGGGCGCAGAACCCGCGCCGCTGCTGCTGGGCTTTATTTTGGGCCCCATGATGGAAGAAAACCTGC GCCGCGCGCTGCTGCTGTCCCGGGGTGACTGGAGCGTGTTTGTCACGCGTCCGCTGTCAGCCGGCTTGCTGGCCGCCGGG GGGCTGCTGCTGCTGATCGTGCTGCTGCCGGCGGTGAAAAACAAACGCGAAGAAGCGTTCCACGAAGAAGACTGA
Upstream 100 bases:
>100_bases TCGCAACGGTTCTCGCCGTCGGCAGCTACCTGGCTTTCGTCGTTGCGCTCAAGCTGCAGTTCCCGGTGTGGCCTGCCTTC ATCACCGGCTAAGGAAAAAA
Downstream 100 bases:
>100_bases TTTTCCCAGTTTTCCATCCCTAAAAGACGGCGCCTTCGGGCGCCGTTTTTTATGGGGCTTGTACCCGTGCTGTAACCACT CTGGGCCACAATGCGGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MDLIANLSLGFGVAFTPINLLYALAGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSALIMLAGIYYGAQYGGSTTAI LVNLPGESSSVVTCIDGYQMARKGRAGPALAAAGLGSFFAGCVGTLVLAAFAPPLTELAFKFGPAEYFSLMVLGLIGAVV LASGSLLKAVAMIVLGLLLGLIGTDVNSGVARFSFDVPELTDGIGFVVIAMGVFGYGEIISNLAQPEHEREVFTAKVSGL FPTKQDFKDMVPAMLRGTLLGSSLGILPGGGALLSAFAAYALEKKLKMKPGEVPFGQGNIRGVAGPESANNAGAQTSFIP LLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWGLIASMWIGNAMLIILNLPLIGMWIKLLTVPYRYLFPAIVL FCAIGVYSTNNNTWDIWMVGIFGVIGYIFVKLGAEPAPLLLGFILGPMMEENLRRALLLSRGDWSVFVTRPLSAGLLAAG GLLLLIVLLPAVKNKREEAFHEED
Sequences:
>Translated_504_residues MDLIANLSLGFGVAFTPINLLYALAGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSALIMLAGIYYGAQYGGSTTAI LVNLPGESSSVVTCIDGYQMARKGRAGPALAAAGLGSFFAGCVGTLVLAAFAPPLTELAFKFGPAEYFSLMVLGLIGAVV LASGSLLKAVAMIVLGLLLGLIGTDVNSGVARFSFDVPELTDGIGFVVIAMGVFGYGEIISNLAQPEHEREVFTAKVSGL FPTKQDFKDMVPAMLRGTLLGSSLGILPGGGALLSAFAAYALEKKLKMKPGEVPFGQGNIRGVAGPESANNAGAQTSFIP LLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWGLIASMWIGNAMLIILNLPLIGMWIKLLTVPYRYLFPAIVL FCAIGVYSTNNNTWDIWMVGIFGVIGYIFVKLGAEPAPLLLGFILGPMMEENLRRALLLSRGDWSVFVTRPLSAGLLAAG GLLLLIVLLPAVKNKREEAFHEED >Mature_504_residues MDLIANLSLGFGVAFTPINLLYALAGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSALIMLAGIYYGAQYGGSTTAI LVNLPGESSSVVTCIDGYQMARKGRAGPALAAAGLGSFFAGCVGTLVLAAFAPPLTELAFKFGPAEYFSLMVLGLIGAVV LASGSLLKAVAMIVLGLLLGLIGTDVNSGVARFSFDVPELTDGIGFVVIAMGVFGYGEIISNLAQPEHEREVFTAKVSGL FPTKQDFKDMVPAMLRGTLLGSSLGILPGGGALLSAFAAYALEKKLKMKPGEVPFGQGNIRGVAGPESANNAGAQTSFIP LLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWGLIASMWIGNAMLIILNLPLIGMWIKLLTVPYRYLFPAIVL FCAIGVYSTNNNTWDIWMVGIFGVIGYIFVKLGAEPAPLLLGFILGPMMEENLRRALLLSRGDWSVFVTRPLSAGLLAAG GLLLLIVLLPAVKNKREEAFHEED
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52746; Mature: 52746
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIANLSLGFGVAFTPINLLYALAGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSA CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH LIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTCIDGYQMARKGRAGPALAAAGLGSFFA HHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHH GCVGTLVLAAFAPPLTELAFKFGPAEYFSLMVLGLIGAVVLASGSLLKAVAMIVLGLLLG HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LIGTDVNSGVARFSFDVPELTDGIGFVVIAMGVFGYGEIISNLAQPEHEREVFTAKVSGL HHHCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC FPTKQDFKDMVPAMLRGTLLGSSLGILPGGGALLSAFAAYALEKKLKMKPGEVPFGQGNI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RGVAGPESANNAGAQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWG CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHH LIASMWIGNAMLIILNLPLIGMWIKLLTVPYRYLFPAIVLFCAIGVYSTNNNTWDIWMVG HHHHHHHCCHHEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHH IFGVIGYIFVKLGAEPAPLLLGFILGPMMEENLRRALLLSRGDWSVFVTRPLSAGLLAAG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH GLLLLIVLLPAVKNKREEAFHEED HHHHHHHHHHHHCCHHHHHCCCCC >Mature Secondary Structure MDLIANLSLGFGVAFTPINLLYALAGCILGTLIGVLPGIGPVATIAMLLPATYALPPVSA CCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH LIMLAGIYYGAQYGGSTTAILVNLPGESSSVVTCIDGYQMARKGRAGPALAAAGLGSFFA HHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHH GCVGTLVLAAFAPPLTELAFKFGPAEYFSLMVLGLIGAVVLASGSLLKAVAMIVLGLLLG HHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH LIGTDVNSGVARFSFDVPELTDGIGFVVIAMGVFGYGEIISNLAQPEHEREVFTAKVSGL HHHCCCCCCCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC FPTKQDFKDMVPAMLRGTLLGSSLGILPGGGALLSAFAAYALEKKLKMKPGEVPFGQGNI CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC RGVAGPESANNAGAQTSFIPLLTLGIPPNAVMALMVGAMTIHNIQPGPQVMTSNPELFWG CCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCEECCCCHHHHH LIASMWIGNAMLIILNLPLIGMWIKLLTVPYRYLFPAIVLFCAIGVYSTNNNTWDIWMVG HHHHHHHCCHHEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEHHHH IFGVIGYIFVKLGAEPAPLLLGFILGPMMEENLRRALLLSRGDWSVFVTRPLSAGLLAAG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHH GLLLLIVLLPAVKNKREEAFHEED HHHHHHHHHHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]