| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789721
Identifier: 91789721
GI number: 91789721
Start: 4071039
End: 4072367
Strand: Reverse
Name: 91789721
Synonym: Bpro_3879
Alternate gene names: NA
Gene position: 4072367-4071039 (Counterclockwise)
Preceding gene: 91789722
Following gene: 91789720
Centisome position: 78.31
GC content: 66.37
Gene sequence:
>1329_bases ATGCGGATGAAAAAGGTCATCATGCAACAGAACAACCACCTGCAGCAGCATCCGCAAAGAACGGCGCTGCACAACGAAAT CCATGCCCGCCCGCCCGAGGCGATGACTGCTCCCCTGGCCATTTCACACGTGGTGATGGTGTGCGACGCTGCCCAGCGCG AGGCCAGCCGCGCCCATGTGGCTGCCTTGCTGCGCGACCACCATCTTCCCCAGCCTGACCTGGCGTCTACCCACATCCGC ATGGAAGTGGGGCCGTTTCGCATCCGCTGGGAGCTGCACACCGAGTTTGTTTCCTGGACCTTCACGCACCCGGTCGAGCT TGACGACCTCGACCAGCGCGAGCCCGTCGCCGCCATCGCCGTCGTGCCGCAGGACTGGCTCGCCGGCTTGCCCGGCCAAT GCCTCGCGGCGCTGCACCTGTGGGCCTTGCCCATGCACAGCCTGGGTGCTTCGACGCTGTCCCGGCGCGTGTTGCAGGAA GACACCCTGATCGGCTCCTCGGTGGCCGACGGCAACGGCGAGGTCTACACCGATCTGAGCATTCATGCCGATGGCTTTTC CCGCATGGTGGTGCTGGCCGGCAGCCTGACGCCGCGCCGCCTGGGCCGGCTGGTGCAGCGCCTCATCGAGATTGAAACCT ACCGCATGGCCGCGCTGCTGGGTCTGCCGGCGGCGCGCGAGGCCTACAGCGTGCTGGCCTATGCCGAGCGCGAGCTGGCC GAACTGGCGCAGTCGATTCGCAGCGCCACGCCCAACGACGAACCCGTGCTGCTGGATCGCCTGACCAAACTGGCCGGCCA GGTGGAAAGCCAGCATGCGGCCACCCACTCGCGGTTTTCGGCCAGTGCGGCGTATTTCGAGCTGGTGGACAAGCGCATTG ACGACATTGCGGAGGCCCGGCTGCCAGGCCTGCAGACCATCCGTGAATTCATGGACCGCCGCCTCACACCGGCGCGCAGT ACCTGCGAGTGGGCCGCGCGCCGGCAGGACGCCTTGTCGCAGCGGGTTTCACGCATCAGCAACCTGCTGCGCACCCGGGT CGAAATTGACCAGCAGCAGAGCAGCCAGGCGCTGCTGGCCACCATGAACCAGCGCCAAGGCGTGCAGCTCAAGCTGCAGA CCGCGGTCGAGGGCCTGTCCGTGGCCGCCATCACCTATTACACCGTCGGCCTCATTGCCTACATGGCCAAGGGAGCGCAG GCACTGGGCTGGCCGTGGAGCGGCGAAAGCACGGCCGCACTGGCCATACCGCTGGTGGCTGCGGCTGTGTGGTGGTCCAT GCGAAAACTGCACCGGAAAATTGTGGAACAGCACCCCGGGGAAGCTTGA
Upstream 100 bases:
>100_bases AGAAGACTGATTTTCCCAGTTTTCCATCCCTAAAAGACGGCGCCTTCGGGCGCCGTTTTTTATGGGGCTTGTACCCGTGC TGTAACCACTCTGGGCCACA
Downstream 100 bases:
>100_bases AAGCCTTCTGCCCCTGCCGGTTGCCGCCTCCGGGCGCTTTTTTTTTTCAGACTGATGATTCACTGTCTCGGCAACTTCGC ACGCCTATCCCTGAAGGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MRMKKVIMQQNNHLQQHPQRTALHNEIHARPPEAMTAPLAISHVVMVCDAAQREASRAHVAALLRDHHLPQPDLASTHIR MEVGPFRIRWELHTEFVSWTFTHPVELDDLDQREPVAAIAVVPQDWLAGLPGQCLAALHLWALPMHSLGASTLSRRVLQE DTLIGSSVADGNGEVYTDLSIHADGFSRMVVLAGSLTPRRLGRLVQRLIEIETYRMAALLGLPAAREAYSVLAYAERELA ELAQSIRSATPNDEPVLLDRLTKLAGQVESQHAATHSRFSASAAYFELVDKRIDDIAEARLPGLQTIREFMDRRLTPARS TCEWAARRQDALSQRVSRISNLLRTRVEIDQQQSSQALLATMNQRQGVQLKLQTAVEGLSVAAITYYTVGLIAYMAKGAQ ALGWPWSGESTAALAIPLVAAAVWWSMRKLHRKIVEQHPGEA
Sequences:
>Translated_442_residues MRMKKVIMQQNNHLQQHPQRTALHNEIHARPPEAMTAPLAISHVVMVCDAAQREASRAHVAALLRDHHLPQPDLASTHIR MEVGPFRIRWELHTEFVSWTFTHPVELDDLDQREPVAAIAVVPQDWLAGLPGQCLAALHLWALPMHSLGASTLSRRVLQE DTLIGSSVADGNGEVYTDLSIHADGFSRMVVLAGSLTPRRLGRLVQRLIEIETYRMAALLGLPAAREAYSVLAYAERELA ELAQSIRSATPNDEPVLLDRLTKLAGQVESQHAATHSRFSASAAYFELVDKRIDDIAEARLPGLQTIREFMDRRLTPARS TCEWAARRQDALSQRVSRISNLLRTRVEIDQQQSSQALLATMNQRQGVQLKLQTAVEGLSVAAITYYTVGLIAYMAKGAQ ALGWPWSGESTAALAIPLVAAAVWWSMRKLHRKIVEQHPGEA >Mature_442_residues MRMKKVIMQQNNHLQQHPQRTALHNEIHARPPEAMTAPLAISHVVMVCDAAQREASRAHVAALLRDHHLPQPDLASTHIR MEVGPFRIRWELHTEFVSWTFTHPVELDDLDQREPVAAIAVVPQDWLAGLPGQCLAALHLWALPMHSLGASTLSRRVLQE DTLIGSSVADGNGEVYTDLSIHADGFSRMVVLAGSLTPRRLGRLVQRLIEIETYRMAALLGLPAAREAYSVLAYAERELA ELAQSIRSATPNDEPVLLDRLTKLAGQVESQHAATHSRFSASAAYFELVDKRIDDIAEARLPGLQTIREFMDRRLTPARS TCEWAARRQDALSQRVSRISNLLRTRVEIDQQQSSQALLATMNQRQGVQLKLQTAVEGLSVAAITYYTVGLIAYMAKGAQ ALGWPWSGESTAALAIPLVAAAVWWSMRKLHRKIVEQHPGEA
Specific function: Unknown
COG id: COG4949
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49135; Mature: 49135
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRMKKVIMQQNNHLQQHPQRTALHNEIHARPPEAMTAPLAISHVVMVCDAAQREASRAHV CCHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLRDHHLPQPDLASTHIRMEVGPFRIRWELHTEFVSWTFTHPVELDDLDQREPVAAIA HHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEE VVPQDWLAGLPGQCLAALHLWALPMHSLGASTLSRRVLQEDTLIGSSVADGNGEVYTDLS ECCHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE IHADGFSRMVVLAGSLTPRRLGRLVQRLIEIETYRMAALLGLPAAREAYSVLAYAERELA EECCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ELAQSIRSATPNDEPVLLDRLTKLAGQVESQHAATHSRFSASAAYFELVDKRIDDIAEAR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPGLQTIREFMDRRLTPARSTCEWAARRQDALSQRVSRISNLLRTRVEIDQQQSSQALLA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMNQRQGVQLKLQTAVEGLSVAAITYYTVGLIAYMAKGAQALGWPWSGESTAALAIPLVA HHHCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHH AAVWWSMRKLHRKIVEQHPGEA HHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRMKKVIMQQNNHLQQHPQRTALHNEIHARPPEAMTAPLAISHVVMVCDAAQREASRAHV CCHHHHHHHCCCHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AALLRDHHLPQPDLASTHIRMEVGPFRIRWELHTEFVSWTFTHPVELDDLDQREPVAAIA HHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEEEEEEEEEECCCCCCCCCCCCCCEEEEE VVPQDWLAGLPGQCLAALHLWALPMHSLGASTLSRRVLQEDTLIGSSVADGNGEVYTDLS ECCHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE IHADGFSRMVVLAGSLTPRRLGRLVQRLIEIETYRMAALLGLPAAREAYSVLAYAERELA EECCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH ELAQSIRSATPNDEPVLLDRLTKLAGQVESQHAATHSRFSASAAYFELVDKRIDDIAEAR HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LPGLQTIREFMDRRLTPARSTCEWAARRQDALSQRVSRISNLLRTRVEIDQQQSSQALLA CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TMNQRQGVQLKLQTAVEGLSVAAITYYTVGLIAYMAKGAQALGWPWSGESTAALAIPLVA HHHCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHH AAVWWSMRKLHRKIVEQHPGEA HHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA