| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789708
Identifier: 91789708
GI number: 91789708
Start: 4056210
End: 4056668
Strand: Reverse
Name: 91789708
Synonym: Bpro_3866
Alternate gene names: NA
Gene position: 4056668-4056210 (Counterclockwise)
Preceding gene: 91789710
Following gene: 91789707
Centisome position: 78.01
GC content: 53.81
Gene sequence:
>459_bases ATGCAGGTTTTCAACAAGGAGATCATCATGAAAAAAATACTACTCCTGACGGATGGTTCGGAATGTGCTCTGCGCGGCGT AGCCCTCGTTATCTCAAAACGCGCCCACTATGCCAATCCGGATGACCTCGACATCCATCTGGTCAACGTCCAAGCCCCTT TTTCGCATGACGTCAGTCGTTTTTCCGATCACGACCAGGTAGCCGCATTTCACCATGAGGAGAGCGTGAAGCTCATGCGG GGGGCATGCGAACTTCTGGATGCGGCCGGCGCAAAGTACACGTGCCACCACGAGGTCGGCAAAATCGCAGAAACGATCAC CCACCTGGCTGAAACGCTAAAGTGCGATCAAATCGTCATGGGCACCCATGGTCGCGGGGCGCTCAGTGAGTTTCTGATGG GTTCGATCACGCTGAAGGTGGTCCATCTTTCAAAAATTCCGGTGCTGCTCGTCAAGTAG
Upstream 100 bases:
>100_bases CCGAGACCCAACTGGTGCGCCTTGTTGCCTTGCAGGTTGAGCAAACCCGACGACAGCAAGGGCAGGACAATTTCCAGAAC CGAGCGGCCGGGTTGGGTCT
Downstream 100 bases:
>100_bases TTGCATCTTTTTTCTGGAGTCCGGCATGCATGACAAGCAAGCCCACTCCAAACCGATTGAAGAACTGCTCAGCGACTTTG AGACGCACCTCAAACGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Universal Stress Protein; UspA Domain Protein; Universal Stress Family; Universal Stress Family Protein; Universal Stress Protein UspA; Universal Stress Protein Family; Universal Stress Protein Family Protein
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MQVFNKEIIMKKILLLTDGSECALRGVALVISKRAHYANPDDLDIHLVNVQAPFSHDVSRFSDHDQVAAFHHEESVKLMR GACELLDAAGAKYTCHHEVGKIAETITHLAETLKCDQIVMGTHGRGALSEFLMGSITLKVVHLSKIPVLLVK
Sequences:
>Translated_152_residues MQVFNKEIIMKKILLLTDGSECALRGVALVISKRAHYANPDDLDIHLVNVQAPFSHDVSRFSDHDQVAAFHHEESVKLMR GACELLDAAGAKYTCHHEVGKIAETITHLAETLKCDQIVMGTHGRGALSEFLMGSITLKVVHLSKIPVLLVK >Mature_152_residues MQVFNKEIIMKKILLLTDGSECALRGVALVISKRAHYANPDDLDIHLVNVQAPFSHDVSRFSDHDQVAAFHHEESVKLMR GACELLDAAGAKYTCHHEVGKIAETITHLAETLKCDQIVMGTHGRGALSEFLMGSITLKVVHLSKIPVLLVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16749; Mature: 16749
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVFNKEIIMKKILLLTDGSECALRGVALVISKRAHYANPDDLDIHLVNVQAPFSHDVSR CCCHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHH FSDHDQVAAFHHEESVKLMRGACELLDAAGAKYTCHHEVGKIAETITHLAETLKCDQIVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEE GTHGRGALSEFLMGSITLKVVHLSKIPVLLVK CCCCCHHHHHHHHHHHEEEEEEECCCCEEEEC >Mature Secondary Structure MQVFNKEIIMKKILLLTDGSECALRGVALVISKRAHYANPDDLDIHLVNVQAPFSHDVSR CCCHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCHHH FSDHDQVAAFHHEESVKLMRGACELLDAAGAKYTCHHEVGKIAETITHLAETLKCDQIVM CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCEEEE GTHGRGALSEFLMGSITLKVVHLSKIPVLLVK CCCCCHHHHHHHHHHHEEEEEEECCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA