| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yloB [H]
Identifier: 91789707
GI number: 91789707
Start: 4055777
End: 4056184
Strand: Reverse
Name: yloB [H]
Synonym: Bpro_3865
Alternate gene names: 91789707
Gene position: 4056184-4055777 (Counterclockwise)
Preceding gene: 91789708
Following gene: 91789706
Centisome position: 78.0
GC content: 52.45
Gene sequence:
>408_bases ATGCATGACAAGCAAGCCCACTCCAAACCGATTGAAGAACTGCTCAGCGACTTTGAGACGCACCTCAAACGCGGTCTGAC CCAGGTACAAGCACAGGAGCGACTCGCAAAGTTTGGTGCCAACGAACTGACCGAGCGGCCACGGCCGGGCTTTTTGGCGC TGCTGTGGGATCAGTTCAAAAATTTCCTTGTGATCATTCTGATCATTGCTGCGGCGATTTCACTCGCACTCGGCGAGTAC GTCGACTCCGTTGCCATCTTGTTCATTGTGGTGCTCAACGCTGTGGTCGGAGTCTTTCAGGAGTCAAAGACGCAGACAAA ACACCTCAGCCGCGCCCTGGGCTTGCAAATAATCTATTTTTACTGTCCAATGAAGGAACGAAGGGGAGTAACTCCCTCGT TTTGCTGA
Upstream 100 bases:
>100_bases AGTGAGTTTCTGATGGGTTCGATCACGCTGAAGGTGGTCCATCTTTCAAAAATTCCGGTGCTGCTCGTCAAGTAGTTGCA TCTTTTTTCTGGAGTCCGGC
Downstream 100 bases:
>100_bases CACATTCGATAACAGATACCACAGCAAAATCGCCACAGCAAGTCGTCATTCCGAAGTTCACACTTCCGGCTTGCTGGATA TGCGGAGACACTGCATATCG
Product: cation transporting ATPase-like protein
Products: NA
Alternate protein names: Calcium pump [H]
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFKNFLVIILIIAAAISLALGEY VDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYFYCPMKERRGVTPSFC
Sequences:
>Translated_135_residues MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFKNFLVIILIIAAAISLALGEY VDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYFYCPMKERRGVTPSFC >Mature_135_residues MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFKNFLVIILIIAAAISLALGEY VDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYFYCPMKERRGVTPSFC
Specific function: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium [H]
COG id: COG0474
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIA subfamily [H]
Homologues:
Organism=Homo sapiens, GI209413709, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=7e-12, Organism=Homo sapiens, GI24638454, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=7e-12, Organism=Homo sapiens, GI4502285, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=7e-12, Organism=Homo sapiens, GI10835220, Length=113, Percent_Identity=37.1681415929204, Blast_Score=65, Evalue=2e-11, Organism=Homo sapiens, GI27886529, Length=111, Percent_Identity=37.8378378378378, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24762455, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24762453, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24762447, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24762457, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24762449, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24762445, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI24762451, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12, Organism=Drosophila melanogaster, GI17136664, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006068 - InterPro: IPR004014 - InterPro: IPR000695 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 [H]
Pfam domain/function: PF00689 Cation_ATPase_C; PF00690 Cation_ATPase_N; PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]
EC number: =3.6.3.8 [H]
Molecular weight: Translated: 15258; Mature: 15258
Theoretical pI: Translated: 8.73; Mature: 8.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHH NFLVIILIIAAAISLALGEYVDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YCPMKERRGVTPSFC HCCCHHHCCCCCCCC >Mature Secondary Structure MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHH NFLVIILIIAAAISLALGEYVDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YCPMKERRGVTPSFC HCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]