Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yloB [H]

Identifier: 91789707

GI number: 91789707

Start: 4055777

End: 4056184

Strand: Reverse

Name: yloB [H]

Synonym: Bpro_3865

Alternate gene names: 91789707

Gene position: 4056184-4055777 (Counterclockwise)

Preceding gene: 91789708

Following gene: 91789706

Centisome position: 78.0

GC content: 52.45

Gene sequence:

>408_bases
ATGCATGACAAGCAAGCCCACTCCAAACCGATTGAAGAACTGCTCAGCGACTTTGAGACGCACCTCAAACGCGGTCTGAC
CCAGGTACAAGCACAGGAGCGACTCGCAAAGTTTGGTGCCAACGAACTGACCGAGCGGCCACGGCCGGGCTTTTTGGCGC
TGCTGTGGGATCAGTTCAAAAATTTCCTTGTGATCATTCTGATCATTGCTGCGGCGATTTCACTCGCACTCGGCGAGTAC
GTCGACTCCGTTGCCATCTTGTTCATTGTGGTGCTCAACGCTGTGGTCGGAGTCTTTCAGGAGTCAAAGACGCAGACAAA
ACACCTCAGCCGCGCCCTGGGCTTGCAAATAATCTATTTTTACTGTCCAATGAAGGAACGAAGGGGAGTAACTCCCTCGT
TTTGCTGA

Upstream 100 bases:

>100_bases
AGTGAGTTTCTGATGGGTTCGATCACGCTGAAGGTGGTCCATCTTTCAAAAATTCCGGTGCTGCTCGTCAAGTAGTTGCA
TCTTTTTTCTGGAGTCCGGC

Downstream 100 bases:

>100_bases
CACATTCGATAACAGATACCACAGCAAAATCGCCACAGCAAGTCGTCATTCCGAAGTTCACACTTCCGGCTTGCTGGATA
TGCGGAGACACTGCATATCG

Product: cation transporting ATPase-like protein

Products: NA

Alternate protein names: Calcium pump [H]

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFKNFLVIILIIAAAISLALGEY
VDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYFYCPMKERRGVTPSFC

Sequences:

>Translated_135_residues
MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFKNFLVIILIIAAAISLALGEY
VDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYFYCPMKERRGVTPSFC
>Mature_135_residues
MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFKNFLVIILIIAAAISLALGEY
VDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYFYCPMKERRGVTPSFC

Specific function: This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium [H]

COG id: COG0474

COG function: function code P; Cation transport ATPase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIA subfamily [H]

Homologues:

Organism=Homo sapiens, GI209413709, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI24638454, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=7e-12,
Organism=Homo sapiens, GI4502285, Length=113, Percent_Identity=36.283185840708, Blast_Score=66, Evalue=7e-12,
Organism=Homo sapiens, GI10835220, Length=113, Percent_Identity=37.1681415929204, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI27886529, Length=111, Percent_Identity=37.8378378378378, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24762455, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24762453, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24762447, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24762457, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24762449, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24762445, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24762451, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI17136664, Length=113, Percent_Identity=36.283185840708, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008250
- InterPro:   IPR006068
- InterPro:   IPR004014
- InterPro:   IPR000695
- InterPro:   IPR001757
- InterPro:   IPR018303
- InterPro:   IPR005834
- InterPro:   IPR023214 [H]

Pfam domain/function: PF00689 Cation_ATPase_C; PF00690 Cation_ATPase_N; PF00122 E1-E2_ATPase; PF00702 Hydrolase [H]

EC number: =3.6.3.8 [H]

Molecular weight: Translated: 15258; Mature: 15258

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHH
NFLVIILIIAAAISLALGEYVDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YCPMKERRGVTPSFC
HCCCHHHCCCCCCCC
>Mature Secondary Structure
MHDKQAHSKPIEELLSDFETHLKRGLTQVQAQERLAKFGANELTERPRPGFLALLWDQFK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHH
NFLVIILIIAAAISLALGEYVDSVAILFIVVLNAVVGVFQESKTQTKHLSRALGLQIIYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YCPMKERRGVTPSFC
HCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]