Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789698

Identifier: 91789698

GI number: 91789698

Start: 4047252

End: 4048238

Strand: Direct

Name: 91789698

Synonym: Bpro_3854

Alternate gene names: NA

Gene position: 4047252-4048238 (Clockwise)

Preceding gene: 91789695

Following gene: 91789699

Centisome position: 77.83

GC content: 59.07

Gene sequence:

>987_bases
ATGATCAACCAACTTGTTAAAAAATACCTTTTGGGCGCATGCGTCCTTACGCTGGCGGGTGCGACGTCGCTAGCCAGCGC
CCAGCCCTTCCCAAGCAAGCCGGTCAAACTCATCGTGCCCTATCCGGCAGGAGCGCCGGTGGACAACTTTGCACGGGGTT
TGGGCGAGGCGCTCACCGGCTTATGGGGGCAACCGGTTATCGTTGACAACCGGCCCGGCGCCAATGAAATCATCGCCGCC
TCCTTCGTGGCGAAAGCCCCGGCCGATGGCTATACGCTCTTGCTGGGTTCAGACGCGGCCTTTACGCATAACGCGTTTCT
CTATTCCAAGATGCCCTACGACGCAGACAAGGATCTGACCCCGATCACACGGGCCGTTCACTTCAACATGGTGCTGATCA
CCAAGGGTGATCTGAAGACGCCAACACTCAAAGACTTTGTGGCCCTGATGAAAAAAGAGGGCCCCAAACACAGCTACGCC
TCGGCCGGCAGCGGTGGAACCACGCACCAGGCATTGGAGAGCCTCAAACAGGAAGCCGCGTTTGACATGATCCACGTGCC
CTACAAGGGCATTGCTCCGGCCATACAGGACATGCTGGGCGGCAACATCGACGCCATGGTGGCCGGAGCCTCTGCGGCCA
TCCCTCACCTGCAAAGTGGCAAGGTCAAGATACTGGCAATTGCCGGGTCCAAGCGTGCCAAGGCGCTGCCGGATGTCCCC
ACCTTTGCCGAATCCGGCTACCCCAACGTGATGGCCAACCTCTACCTGGCGCTGGCCGGCCCTGCCGGAACACCGCCCGC
CATCGCGAACAAAATCACGGCTGACGTACAGAAGGTGCTGAAAAGCAAGGAGTTCCTCGACCGGTTCGTCGATCCCTACG
GCTATGAGCCCATCGGGGACACGCCGCAACAGTTTGAAGCCTTCCTGAAAAAGGACAAAGACGTTTCCGGCAAGCGCATC
AAGGCACTGGGGATCAAACTTGACTGA

Upstream 100 bases:

>100_bases
CTTATCTACAAATCGTTCCTTTGAGTGGTACAGTATTCCTTTGAGAGGAACAATATTGATTTCCGTATTTGCATTTCATT
CAATTCCATGGAGACTTTTC

Downstream 100 bases:

>100_bases
GACCAGCTTCCGGCAACTGGTGCGTGCACGCAACCGGCTGGTGGGCACCTTTGTCAAGACGGCCAGCCATCAGACGGTTG
AGGTCCTCGGGACCACCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MINQLVKKYLLGACVLTLAGATSLASAQPFPSKPVKLIVPYPAGAPVDNFARGLGEALTGLWGQPVIVDNRPGANEIIAA
SFVAKAPADGYTLLLGSDAAFTHNAFLYSKMPYDADKDLTPITRAVHFNMVLITKGDLKTPTLKDFVALMKKEGPKHSYA
SAGSGGTTHQALESLKQEAAFDMIHVPYKGIAPAIQDMLGGNIDAMVAGASAAIPHLQSGKVKILAIAGSKRAKALPDVP
TFAESGYPNVMANLYLALAGPAGTPPAIANKITADVQKVLKSKEFLDRFVDPYGYEPIGDTPQQFEAFLKKDKDVSGKRI
KALGIKLD

Sequences:

>Translated_328_residues
MINQLVKKYLLGACVLTLAGATSLASAQPFPSKPVKLIVPYPAGAPVDNFARGLGEALTGLWGQPVIVDNRPGANEIIAA
SFVAKAPADGYTLLLGSDAAFTHNAFLYSKMPYDADKDLTPITRAVHFNMVLITKGDLKTPTLKDFVALMKKEGPKHSYA
SAGSGGTTHQALESLKQEAAFDMIHVPYKGIAPAIQDMLGGNIDAMVAGASAAIPHLQSGKVKILAIAGSKRAKALPDVP
TFAESGYPNVMANLYLALAGPAGTPPAIANKITADVQKVLKSKEFLDRFVDPYGYEPIGDTPQQFEAFLKKDKDVSGKRI
KALGIKLD
>Mature_328_residues
MINQLVKKYLLGACVLTLAGATSLASAQPFPSKPVKLIVPYPAGAPVDNFARGLGEALTGLWGQPVIVDNRPGANEIIAA
SFVAKAPADGYTLLLGSDAAFTHNAFLYSKMPYDADKDLTPITRAVHFNMVLITKGDLKTPTLKDFVALMKKEGPKHSYA
SAGSGGTTHQALESLKQEAAFDMIHVPYKGIAPAIQDMLGGNIDAMVAGASAAIPHLQSGKVKILAIAGSKRAKALPDVP
TFAESGYPNVMANLYLALAGPAGTPPAIANKITADVQKVLKSKEFLDRFVDPYGYEPIGDTPQQFEAFLKKDKDVSGKRI
KALGIKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34673; Mature: 34673

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINQLVKKYLLGACVLTLAGATSLASAQPFPSKPVKLIVPYPAGAPVDNFARGLGEALTG
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LWGQPVIVDNRPGANEIIAASFVAKAPADGYTLLLGSDAAFTHNAFLYSKMPYDADKDLT
CCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCEEEEECCCCCCCCCCC
PITRAVHFNMVLITKGDLKTPTLKDFVALMKKEGPKHSYASAGSGGTTHQALESLKQEAA
HHHHHEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FDMIHVPYKGIAPAIQDMLGGNIDAMVAGASAAIPHLQSGKVKILAIAGSKRAKALPDVP
HCEEECCCHHHHHHHHHHHCCCHHEEEECCHHCCCCCCCCCEEEEEEECCCCCCCCCCCC
TFAESGYPNVMANLYLALAGPAGTPPAIANKITADVQKVLKSKEFLDRFVDPYGYEPIGD
CHHCCCCCHHHHHEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TPQQFEAFLKKDKDVSGKRIKALGIKLD
CHHHHHHHHHCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MINQLVKKYLLGACVLTLAGATSLASAQPFPSKPVKLIVPYPAGAPVDNFARGLGEALTG
CHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH
LWGQPVIVDNRPGANEIIAASFVAKAPADGYTLLLGSDAAFTHNAFLYSKMPYDADKDLT
CCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEEECCCCEECCEEEEECCCCCCCCCCC
PITRAVHFNMVLITKGDLKTPTLKDFVALMKKEGPKHSYASAGSGGTTHQALESLKQEAA
HHHHHEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
FDMIHVPYKGIAPAIQDMLGGNIDAMVAGASAAIPHLQSGKVKILAIAGSKRAKALPDVP
HCEEECCCHHHHHHHHHHHCCCHHEEEECCHHCCCCCCCCCEEEEEEECCCCCCCCCCCC
TFAESGYPNVMANLYLALAGPAGTPPAIANKITADVQKVLKSKEFLDRFVDPYGYEPIGD
CHHCCCCCHHHHHEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
TPQQFEAFLKKDKDVSGKRIKALGIKLD
CHHHHHHHHHCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]