| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yjbB [H]
Identifier: 91789695
GI number: 91789695
Start: 4043493
End: 4045154
Strand: Direct
Name: yjbB [H]
Synonym: Bpro_3851
Alternate gene names: 91789695
Gene position: 4043493-4045154 (Clockwise)
Preceding gene: 91789694
Following gene: 91789698
Centisome position: 77.76
GC content: 61.25
Gene sequence:
>1662_bases ATGAAGCATCTGTTGAATTTATTGGCAGCCATTGCGCTGCTTGTCTGGGGCACCCAACTAGTACGAACCGGCATTCTGCG GGTGTTTGGTGCCAATCTGCGCCAGGTGTTGGCGCGCAGCATCAGCAACCGTTTCACCGCCGCCTTGTCGGGCATCGGTG TGACCGCCCTGGTACAGTCCGGCACCGCCACCGCGCTGATTGTCTCTTCTTTCGTCGGCCAGGGGCTGATCGCGCTTCCG CTGGCGCTGGCCGTGATGCTGGGCGCCGACATCGGCACCAGCCTGATGGCGGTGGTGTTTTCCTTTGATTTATCCTGGCT GTCGCCCCTCTTCATTTTTCTGGGCGTGGTGCTGTTCATCTCGCGCCAGGACAGCAATGCAGGCCGCCTGGGCCGCGTCC TGATTGGCCTGGGCCTGATGCTGCTGGCCCTGCGGCTGGTCACGGACTCCACCGAGGTGCTTACCCGGGCACCGGCCGTC AAGGCGCTGCTGGCATCGCTCAGCAGTGACTTGCTGCTGGAAATCACCACCGGTGCGGTGTTGTCCGTGGTGTCTTATTC CAGCCTGGCGATCGTGCTGCTCACCGCCACGCTGGCCGGCACCAGCGTCATTCCGCTGGACGTCGCCCTGGGCCTGGTGC TGGGCGCCAACCTGGGCAGCGGCCTGCTGGCCGTACTGACCACGACAAGGTCCTCCATCGAAACGCGGCAGGTACCGATG GGCAACCTGGTGTTCAAGGCGCTGGGCATTGTCATGGCCGCGCCGCTGATCGGCCTGTGGCTGCGGCATGTGCGCCCGCT GCTGGGTGAGCCGGCCACAGCGGTGGTGCTGTTCCACTTCGGCTTCAATGTCATCATCGGTGCGGTCTTCATTGGCCTGA CCCATACGGTAGCGCGCTGGATCGGAGTCTGGCTGCCCAAGGTCGGAAAAAAGACCGACGCCAGCACGCGCCACCACCAT CTGGACCCTTCCGCACTGGCCACGCCCTCGCTGGCGATTTCGTGTGCAGCGCGTGAGGCCATGTACCAGGCCGATGTGGT GGAAACCATGCTGCGCGGCGTGCTTGAAGTCATCAAAAAAGATGACATCAAGCTGGCTGAAGACCTGCGCAAACTCGACG ATACGGTGGATGAGCTGTACTCGGCCATCAAGTACTACCTGACCAAAATCTCCCGCGAAGCCCTGAGTGATGAAGAAAGC CGCCGCTGGACCGACATCATCAGCTTCACCATCAACATGGAGCAGATCGGCGACATCATCGAACGGGTGCTGATTGATAT TGAAGACAAAAAAATCAAGCCGGGCCGTAATTTTTCGGAAGCTGGCATGGCCGAGATCGCCGAGCTGCATGAACGGCTGA TCGACAACCTGCGCCTGGGCATGAGCGTATTTTTGAACGGCACCGTGCGCGATGCCCAGAAGCTGCTGGAAGAAAAAGCG CGCTTTCGCGATCTGGAGCGTACCTATGCCACCACCCACCTGGGCCGCCTGTCGGCCAATACGGTGCAGAGTTTTGAGAC CAGCTCCCTGCACATCGACCTGATCAGCGAGTTGAAGCGCATCAACTCGCATATCTGCTCCATCGCCTACCCGATTCTTG ACTCCGCCGGCGCCTTGGCACCCAACCGCCTGCGGCCCATGGTGCTGACCGACCAGCCCTGA
Upstream 100 bases:
>100_bases CTTGCCCGGCGTGTGGCTTCAGAGTGTGGCTTTAACTTCACAGTGCCGGGGTCAGGCCGCTTGTGCCGCAACCCACTGGC GTATAGTGGCTTCTGACCTT
Downstream 100 bases:
>100_bases AGCCCGGACCTGCCCTCCCGACAGGCCTGCGGACTGGAAATCAGGGCAGTTTCAGCACATCGCAGAGAATCAGCGCGGCT TCGGTGGTGAACTCACCCCG
Product: Na/Pi cotransporter II-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKHLLNLLAAIALLVWGTQLVRTGILRVFGANLRQVLARSISNRFTAALSGIGVTALVQSGTATALIVSSFVGQGLIALP LALAVMLGADIGTSLMAVVFSFDLSWLSPLFIFLGVVLFISRQDSNAGRLGRVLIGLGLMLLALRLVTDSTEVLTRAPAV KALLASLSSDLLLEITTGAVLSVVSYSSLAIVLLTATLAGTSVIPLDVALGLVLGANLGSGLLAVLTTTRSSIETRQVPM GNLVFKALGIVMAAPLIGLWLRHVRPLLGEPATAVVLFHFGFNVIIGAVFIGLTHTVARWIGVWLPKVGKKTDASTRHHH LDPSALATPSLAISCAAREAMYQADVVETMLRGVLEVIKKDDIKLAEDLRKLDDTVDELYSAIKYYLTKISREALSDEES RRWTDIISFTINMEQIGDIIERVLIDIEDKKIKPGRNFSEAGMAEIAELHERLIDNLRLGMSVFLNGTVRDAQKLLEEKA RFRDLERTYATTHLGRLSANTVQSFETSSLHIDLISELKRINSHICSIAYPILDSAGALAPNRLRPMVLTDQP
Sequences:
>Translated_553_residues MKHLLNLLAAIALLVWGTQLVRTGILRVFGANLRQVLARSISNRFTAALSGIGVTALVQSGTATALIVSSFVGQGLIALP LALAVMLGADIGTSLMAVVFSFDLSWLSPLFIFLGVVLFISRQDSNAGRLGRVLIGLGLMLLALRLVTDSTEVLTRAPAV KALLASLSSDLLLEITTGAVLSVVSYSSLAIVLLTATLAGTSVIPLDVALGLVLGANLGSGLLAVLTTTRSSIETRQVPM GNLVFKALGIVMAAPLIGLWLRHVRPLLGEPATAVVLFHFGFNVIIGAVFIGLTHTVARWIGVWLPKVGKKTDASTRHHH LDPSALATPSLAISCAAREAMYQADVVETMLRGVLEVIKKDDIKLAEDLRKLDDTVDELYSAIKYYLTKISREALSDEES RRWTDIISFTINMEQIGDIIERVLIDIEDKKIKPGRNFSEAGMAEIAELHERLIDNLRLGMSVFLNGTVRDAQKLLEEKA RFRDLERTYATTHLGRLSANTVQSFETSSLHIDLISELKRINSHICSIAYPILDSAGALAPNRLRPMVLTDQP >Mature_553_residues MKHLLNLLAAIALLVWGTQLVRTGILRVFGANLRQVLARSISNRFTAALSGIGVTALVQSGTATALIVSSFVGQGLIALP LALAVMLGADIGTSLMAVVFSFDLSWLSPLFIFLGVVLFISRQDSNAGRLGRVLIGLGLMLLALRLVTDSTEVLTRAPAV KALLASLSSDLLLEITTGAVLSVVSYSSLAIVLLTATLAGTSVIPLDVALGLVLGANLGSGLLAVLTTTRSSIETRQVPM GNLVFKALGIVMAAPLIGLWLRHVRPLLGEPATAVVLFHFGFNVIIGAVFIGLTHTVARWIGVWLPKVGKKTDASTRHHH LDPSALATPSLAISCAAREAMYQADVVETMLRGVLEVIKKDDIKLAEDLRKLDDTVDELYSAIKYYLTKISREALSDEES RRWTDIISFTINMEQIGDIIERVLIDIEDKKIKPGRNFSEAGMAEIAELHERLIDNLRLGMSVFLNGTVRDAQKLLEEKA RFRDLERTYATTHLGRLSANTVQSFETSSLHIDLISELKRINSHICSIAYPILDSAGALAPNRLRPMVLTDQP
Specific function: Unknown
COG id: COG1283
COG function: function code P; Na+/phosphate symporter
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis yqeW [H]
Homologues:
Organism=Escherichia coli, GI1790451, Length=535, Percent_Identity=46.9158878504673, Blast_Score=451, Evalue=1e-128,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003841 - InterPro: IPR004633 [H]
Pfam domain/function: PF02690 Na_Pi_cotrans [H]
EC number: NA
Molecular weight: Translated: 59801; Mature: 59801
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHLLNLLAAIALLVWGTQLVRTGILRVFGANLRQVLARSISNRFTAALSGIGVTALVQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC GTATALIVSSFVGQGLIALPLALAVMLGADIGTSLMAVVFSFDLSWLSPLFIFLGVVLFI CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQDSNAGRLGRVLIGLGLMLLALRLVTDSTEVLTRAPAVKALLASLSSDLLLEITTGAV HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH LSVVSYSSLAIVLLTATLAGTSVIPLDVALGLVLGANLGSGLLAVLTTTRSSIETRQVPM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC GNLVFKALGIVMAAPLIGLWLRHVRPLLGEPATAVVLFHFGFNVIIGAVFIGLTHTVARW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVWLPKVGKKTDASTRHHHLDPSALATPSLAISCAAREAMYQADVVETMLRGVLEVIKK HHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDIKLAEDLRKLDDTVDELYSAIKYYLTKISREALSDEESRRWTDIISFTINMEQIGDII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECHHHHHHHH ERVLIDIEDKKIKPGRNFSEAGMAEIAELHERLIDNLRLGMSVFLNGTVRDAQKLLEEKA HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RFRDLERTYATTHLGRLSANTVQSFETSSLHIDLISELKRINSHICSIAYPILDSAGALA HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PNRLRPMVLTDQP CCCCCCCEECCCC >Mature Secondary Structure MKHLLNLLAAIALLVWGTQLVRTGILRVFGANLRQVLARSISNRFTAALSGIGVTALVQS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHC GTATALIVSSFVGQGLIALPLALAVMLGADIGTSLMAVVFSFDLSWLSPLFIFLGVVLFI CCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRQDSNAGRLGRVLIGLGLMLLALRLVTDSTEVLTRAPAVKALLASLSSDLLLEITTGAV HCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEEEHHHHH LSVVSYSSLAIVLLTATLAGTSVIPLDVALGLVLGANLGSGLLAVLTTTRSSIETRQVPM HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCC GNLVFKALGIVMAAPLIGLWLRHVRPLLGEPATAVVLFHFGFNVIIGAVFIGLTHTVARW HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGVWLPKVGKKTDASTRHHHLDPSALATPSLAISCAAREAMYQADVVETMLRGVLEVIKK HHHHHHCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DDIKLAEDLRKLDDTVDELYSAIKYYLTKISREALSDEESRRWTDIISFTINMEQIGDII CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEECHHHHHHHH ERVLIDIEDKKIKPGRNFSEAGMAEIAELHERLIDNLRLGMSVFLNGTVRDAQKLLEEKA HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH RFRDLERTYATTHLGRLSANTVQSFETSSLHIDLISELKRINSHICSIAYPILDSAGALA HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PNRLRPMVLTDQP CCCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]