Click here to switch to the map view.

The map label for this gene is bcd [H]

Identifier: 91789679

GI number: 91789679

Start: 4025311

End: 4026531

Strand: Reverse

Name: bcd [H]

Synonym: Bpro_3835

Alternate gene names: 91789679

Gene position: 4026531-4025311 (Counterclockwise)

Preceding gene: 91789680

Following gene: 91789678

Centisome position: 77.43

GC content: 64.05

Gene sequence:

>1221_bases
ATGACCCATCCAGCCCGCAGGGCCGACACCTTGTTCCACGATGTGGGGCTGCCCGACGAGACGCGCCGGATTCGCGCTGA
AGTGCGTGAATTCGCGCAAGACGTGCTGCGCCCTGTCGCGCACCGCTTGAACACCACCCCTGAATCCAAAGAGGCGTTTC
CGCGCGAACAGTTTGACGCGATGGCGCGCGCGGGGCTTTACACGATTCCCTTTCCGGCAGATGTAGGCGGCCGGGGGCTC
GAATTCCCCACACTGGCGACCCTCACCGTGTTGGAAGAGCTGGCCTATTACAGCCGGGGACTGGCCTCGGCACTCTATGA
CGGGCAGGCCATTCTGGTCGGTAAGACGCTGGAAAAAGCACCTGCCGCGCTGCGCAACAAATACCTGCCGGCGCTGATAC
GCGGCGAGTTTGTCGGCTCGTTCGCGACCAGCGAACCGGAGGCCAGCACCGACTTGTCAGCGACGTCCATGCAAACCACG
GCGACCCAGGTAGCCGGCGGCTGGCGCATCAATGGCCGCAAGCGCTGGATCACCAACTCCCCGGTGGCCGACTGGATTGT
GGTGCTGTGCCGCAGCGGTGAACGCCTCACCATGCTGATGGCCGACATGCGCGCCGAGGGGGTGTCGGTGGGCAAGCCCG
ATCTCAAGATGGGCAACCACCTGCAGCTGACGGCCGACGTCGTGTTCGACAAGGTGTTCGTGCCGGACGACCATGTCGTC
GGCACCGAAGGTGGCGGCCTGCGCGTCGCGCTCGGCGCACTGGCGCTCGGGCGCATGGGCATAGGCGCGATTGGCGTGGC
GATGGCCCAGGCCGCCTTCGACCATGCAGCCGACTATATGTGCAAGCGCAAGGTATTTGGCCAGGAACTCGCGCGCATGC
AGCACTGGCAGTACCTGTTTGCCGAGCATGCAGTGGGCCTGGAGCAGGCGCGCAGCCTCTACCAGAAGGCGGGCTACCGC
TACGACGTGGAAGGCAGCGCCGAGGTCGAGGCAGCCATGGCCAAGCTGGTGGGCAGTCGGCTGGCGGTCGACGTGGCACG
TGATGCGATTCAGGTCTGTGGTGCCTATGGCTTTGTACGCGAGTTGTCGGCCACGGGCGAGTTGATGCCCTTGGAGTCGA
TCTACCGCGACGCCAAGATTGGCGAGATTTACGAAGGTGCGAACGAGATCCAGAAATGGGTGATTGCACGCAACATCTTT
GGCCGCGCTTACACGGGTTAA

Upstream 100 bases:

>100_bases
GCGGTACCCGTGTCCCTTGAACCTGCACCGGCCACCGCAGCACGACGCCGCGCCGGCCTGCGCAAAACCCCGTGATTCCG
AACGCCCCCAGGAAACCGTC

Downstream 100 bases:

>100_bases
TTAAGCGCTTGATGACCCGACTCAGCACAACAGAAAGTACCTCATGAGCGCTTCAAATTCAAACCCGGTGATCTTGACAT
GCGAAGGCGGCATGGCGACG

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: Butyryl-CoA dehydrogenase; SCAD [H]

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MTHPARRADTLFHDVGLPDETRRIRAEVREFAQDVLRPVAHRLNTTPESKEAFPREQFDAMARAGLYTIPFPADVGGRGL
EFPTLATLTVLEELAYYSRGLASALYDGQAILVGKTLEKAPAALRNKYLPALIRGEFVGSFATSEPEASTDLSATSMQTT
ATQVAGGWRINGRKRWITNSPVADWIVVLCRSGERLTMLMADMRAEGVSVGKPDLKMGNHLQLTADVVFDKVFVPDDHVV
GTEGGGLRVALGALALGRMGIGAIGVAMAQAAFDHAADYMCKRKVFGQELARMQHWQYLFAEHAVGLEQARSLYQKAGYR
YDVEGSAEVEAAMAKLVGSRLAVDVARDAIQVCGAYGFVRELSATGELMPLESIYRDAKIGEIYEGANEIQKWVIARNIF
GRAYTG

Sequences:

>Translated_406_residues
MTHPARRADTLFHDVGLPDETRRIRAEVREFAQDVLRPVAHRLNTTPESKEAFPREQFDAMARAGLYTIPFPADVGGRGL
EFPTLATLTVLEELAYYSRGLASALYDGQAILVGKTLEKAPAALRNKYLPALIRGEFVGSFATSEPEASTDLSATSMQTT
ATQVAGGWRINGRKRWITNSPVADWIVVLCRSGERLTMLMADMRAEGVSVGKPDLKMGNHLQLTADVVFDKVFVPDDHVV
GTEGGGLRVALGALALGRMGIGAIGVAMAQAAFDHAADYMCKRKVFGQELARMQHWQYLFAEHAVGLEQARSLYQKAGYR
YDVEGSAEVEAAMAKLVGSRLAVDVARDAIQVCGAYGFVRELSATGELMPLESIYRDAKIGEIYEGANEIQKWVIARNIF
GRAYTG
>Mature_405_residues
THPARRADTLFHDVGLPDETRRIRAEVREFAQDVLRPVAHRLNTTPESKEAFPREQFDAMARAGLYTIPFPADVGGRGLE
FPTLATLTVLEELAYYSRGLASALYDGQAILVGKTLEKAPAALRNKYLPALIRGEFVGSFATSEPEASTDLSATSMQTTA
TQVAGGWRINGRKRWITNSPVADWIVVLCRSGERLTMLMADMRAEGVSVGKPDLKMGNHLQLTADVVFDKVFVPDDHVVG
TEGGGLRVALGALALGRMGIGAIGVAMAQAAFDHAADYMCKRKVFGQELARMQHWQYLFAEHAVGLEQARSLYQKAGYRY
DVEGSAEVEAAMAKLVGSRLAVDVARDAIQVCGAYGFVRELSATGELMPLESIYRDAKIGEIYEGANEIQKWVIARNIFG
RAYTG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=418, Percent_Identity=33.4928229665072, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4557231, Length=393, Percent_Identity=30.7888040712468, Blast_Score=179, Evalue=3e-45,
Organism=Homo sapiens, GI187960098, Length=393, Percent_Identity=30.7888040712468, Blast_Score=179, Evalue=4e-45,
Organism=Homo sapiens, GI4501859, Length=387, Percent_Identity=31.266149870801, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI226958412, Length=389, Percent_Identity=28.0205655526992, Blast_Score=159, Evalue=5e-39,
Organism=Homo sapiens, GI226958414, Length=369, Percent_Identity=27.3712737127371, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI21361497, Length=393, Percent_Identity=26.4631043256997, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI76496475, Length=404, Percent_Identity=27.7227722772277, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI4557235, Length=404, Percent_Identity=27.7227722772277, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI7656849, Length=394, Percent_Identity=26.6497461928934, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4501857, Length=402, Percent_Identity=25.3731343283582, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI4503943, Length=406, Percent_Identity=26.8472906403941, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI7669494, Length=374, Percent_Identity=26.7379679144385, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI38505218, Length=291, Percent_Identity=25.7731958762887, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI48976061, Length=297, Percent_Identity=26.5993265993266, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI211971008, Length=297, Percent_Identity=26.5993265993266, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87081958, Length=400, Percent_Identity=27.5, Blast_Score=119, Evalue=5e-28,
Organism=Escherichia coli, GI1786223, Length=364, Percent_Identity=25.5494505494505, Blast_Score=97, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17534899, Length=398, Percent_Identity=31.1557788944724, Blast_Score=184, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17570075, Length=397, Percent_Identity=31.4861460957179, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17569725, Length=399, Percent_Identity=31.077694235589, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17508101, Length=388, Percent_Identity=33.5051546391753, Blast_Score=177, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI17506239, Length=378, Percent_Identity=31.7460317460317, Blast_Score=160, Evalue=1e-39,
Organism=Caenorhabditis elegans, GI17538396, Length=394, Percent_Identity=27.9187817258883, Blast_Score=151, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17533517, Length=396, Percent_Identity=27.2727272727273, Blast_Score=140, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI71985184, Length=357, Percent_Identity=30.5322128851541, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI17551932, Length=348, Percent_Identity=28.448275862069, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17534353, Length=398, Percent_Identity=24.6231155778894, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71990804, Length=304, Percent_Identity=30.5921052631579, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI71982178, Length=279, Percent_Identity=30.4659498207885, Blast_Score=111, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI17505929, Length=281, Percent_Identity=29.5373665480427, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71985192, Length=296, Percent_Identity=27.7027027027027, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=228, Percent_Identity=30.7017543859649, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17562446, Length=292, Percent_Identity=29.4520547945205, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17531909, Length=248, Percent_Identity=29.4354838709677, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI21356377, Length=392, Percent_Identity=31.8877551020408, Blast_Score=187, Evalue=8e-48,
Organism=Drosophila melanogaster, GI24660351, Length=397, Percent_Identity=30.9823677581864, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24666513, Length=389, Percent_Identity=33.1619537275064, Blast_Score=178, Evalue=5e-45,
Organism=Drosophila melanogaster, GI24646207, Length=390, Percent_Identity=33.0769230769231, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI21355753, Length=398, Percent_Identity=28.643216080402, Blast_Score=148, Evalue=8e-36,
Organism=Drosophila melanogaster, GI281363737, Length=402, Percent_Identity=27.1144278606965, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI19920834, Length=406, Percent_Identity=24.1379310344828, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.2 [H]

Molecular weight: Translated: 44363; Mature: 44232

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPARRADTLFHDVGLPDETRRIRAEVREFAQDVLRPVAHRLNTTPESKEAFPREQFDA
CCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHH
MARAGLYTIPFPADVGGRGLEFPTLATLTVLEELAYYSRGLASALYDGQAILVGKTLEKA
HHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHH
PAALRNKYLPALIRGEFVGSFATSEPEASTDLSATSMQTTATQVAGGWRINGRKRWITNS
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEECCCC
PVADWIVVLCRSGERLTMLMADMRAEGVSVGKPDLKMGNHLQLTADVVFDKVFVPDDHVV
CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHEEECCCCCEE
GTEGGGLRVALGALALGRMGIGAIGVAMAQAAFDHAADYMCKRKVFGQELARMQHWQYLF
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEHAVGLEQARSLYQKAGYRYDVEGSAEVEAAMAKLVGSRLAVDVARDAIQVCGAYGFVR
HHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELSATGELMPLESIYRDAKIGEIYEGANEIQKWVIARNIFGRAYTG
HHHCCCCCCCHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
THPARRADTLFHDVGLPDETRRIRAEVREFAQDVLRPVAHRLNTTPESKEAFPREQFDA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHH
MARAGLYTIPFPADVGGRGLEFPTLATLTVLEELAYYSRGLASALYDGQAILVGKTLEKA
HHHCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHH
PAALRNKYLPALIRGEFVGSFATSEPEASTDLSATSMQTTATQVAGGWRINGRKRWITNS
HHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEECCCEEECCCC
PVADWIVVLCRSGERLTMLMADMRAEGVSVGKPDLKMGNHLQLTADVVFDKVFVPDDHVV
CHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHEEECCCCCEE
GTEGGGLRVALGALALGRMGIGAIGVAMAQAAFDHAADYMCKRKVFGQELARMQHWQYLF
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEHAVGLEQARSLYQKAGYRYDVEGSAEVEAAMAKLVGSRLAVDVARDAIQVCGAYGFVR
HHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELSATGELMPLESIYRDAKIGEIYEGANEIQKWVIARNIFGRAYTG
HHHCCCCCCCHHHHHCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]