Click here to switch to the map view.

The map label for this gene is kstR2 [H]

Identifier: 91789680

GI number: 91789680

Start: 4026557

End: 4027297

Strand: Reverse

Name: kstR2 [H]

Synonym: Bpro_3836

Alternate gene names: 91789680

Gene position: 4027297-4026557 (Counterclockwise)

Preceding gene: 91789681

Following gene: 91789679

Centisome position: 77.44

GC content: 63.43

Gene sequence:

>741_bases
TTGACTGCTCGAAAGCTCGTCTCCCCCTGGGCCCCCACTACCGAACGCGAGAAGGTTCGCACAGACAAGCGCGAGGCGGT
GCTGCGCATGGCAGCACAGGTGTTCAACGAAAAAGGCTACCAGGCTAGCACGCTGGACGAGGTCGCCGAGCGGCTGCATG
TCACCAAGCCGACGCTGTACTACTACGTCAAGAGCAAGGACGAAATTCTTTACGAATGCGTGCGTATTGGCCTCACGATG
CTGCAGGACGCGATCACGGAGGTGGGTGCCTCCGGTGGCAGCGCGATGGACAAGCTGGTGGCCGCCATGCACAAATACAC
CGAGATCGTGACCATGGACTTTGGCATGTGCCTGATCCGCGTGGGCGAAGACCCGCTGCCACCGGAAAGCCAGCGCAAGC
TAAGGCGCATGAAGGCCGCAATCGACAAAGAGTTCCGTGAACTGATCCGGCTTGGCATCGAGGAAGGCTCCATCGCGCCC
TGTGACCCCAAGATCGCCGCCTTCACGCTGGCAGGCGCGCTGAGCTGGATTGGACGCTGGTACCGGCCCGATGGGGCCTT
GAGCCCAGACGACATCGCGCAGCAATGCATCGCTTTGCTGGCCAATGGCCTGTGCAGCGGCAAAGCCAAACCCCTTGTGC
GCCAGCGCCCTGCCGAACCGGCGCCGGCGGTACCCGTGTCCCTTGAACCTGCACCGGCCACCGCAGCACGACGCCGCGCC
GGCCTGCGCAAAACCCCGTGA

Upstream 100 bases:

>100_bases
CTATGCGGCCGAAATTGAGGCGCTGTACCGCTGAACGCTACGCAAACTCCATCTCGCCACGGCATCCCGCTCCACCCTAC
CCCACAGGAATTGAAATATC

Downstream 100 bases:

>100_bases
TTCCGAACGCCCCCAGGAAACCGTCATGACCCATCCAGCCCGCAGGGCCGACACCTTGTTCCACGATGTGGGGCTGCCCG
ACGAGACGCGCCGGATTCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTARKLVSPWAPTTEREKVRTDKREAVLRMAAQVFNEKGYQASTLDEVAERLHVTKPTLYYYVKSKDEILYECVRIGLTM
LQDAITEVGASGGSAMDKLVAAMHKYTEIVTMDFGMCLIRVGEDPLPPESQRKLRRMKAAIDKEFRELIRLGIEEGSIAP
CDPKIAAFTLAGALSWIGRWYRPDGALSPDDIAQQCIALLANGLCSGKAKPLVRQRPAEPAPAVPVSLEPAPATAARRRA
GLRKTP

Sequences:

>Translated_246_residues
MTARKLVSPWAPTTEREKVRTDKREAVLRMAAQVFNEKGYQASTLDEVAERLHVTKPTLYYYVKSKDEILYECVRIGLTM
LQDAITEVGASGGSAMDKLVAAMHKYTEIVTMDFGMCLIRVGEDPLPPESQRKLRRMKAAIDKEFRELIRLGIEEGSIAP
CDPKIAAFTLAGALSWIGRWYRPDGALSPDDIAQQCIALLANGLCSGKAKPLVRQRPAEPAPAVPVSLEPAPATAARRRA
GLRKTP
>Mature_245_residues
TARKLVSPWAPTTEREKVRTDKREAVLRMAAQVFNEKGYQASTLDEVAERLHVTKPTLYYYVKSKDEILYECVRIGLTML
QDAITEVGASGGSAMDKLVAAMHKYTEIVTMDFGMCLIRVGEDPLPPESQRKLRRMKAAIDKEFRELIRLGIEEGSIAPC
DPKIAAFTLAGALSWIGRWYRPDGALSPDDIAQQCIALLANGLCSGKAKPLVRQRPAEPAPAVPVSLEPAPATAARRRAG
LRKTP

Specific function: Controls the expression of a small regulon that may play a role in the utilization of cholesterol [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 27121; Mature: 26990

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARKLVSPWAPTTEREKVRTDKREAVLRMAAQVFNEKGYQASTLDEVAERLHVTKPTLY
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
YYVKSKDEILYECVRIGLTMLQDAITEVGASGGSAMDKLVAAMHKYTEIVTMDFGMCLIR
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
VGEDPLPPESQRKLRRMKAAIDKEFRELIRLGIEEGSIAPCDPKIAAFTLAGALSWIGRW
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YRPDGALSPDDIAQQCIALLANGLCSGKAKPLVRQRPAEPAPAVPVSLEPAPATAARRRA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
GLRKTP
CCCCCC
>Mature Secondary Structure 
TARKLVSPWAPTTEREKVRTDKREAVLRMAAQVFNEKGYQASTLDEVAERLHVTKPTLY
CCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEE
YYVKSKDEILYECVRIGLTMLQDAITEVGASGGSAMDKLVAAMHKYTEIVTMDFGMCLIR
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEE
VGEDPLPPESQRKLRRMKAAIDKEFRELIRLGIEEGSIAPCDPKIAAFTLAGALSWIGRW
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
YRPDGALSPDDIAQQCIALLANGLCSGKAKPLVRQRPAEPAPAVPVSLEPAPATAARRRA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHC
GLRKTP
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA