| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789666
Identifier: 91789666
GI number: 91789666
Start: 4010990
End: 4011922
Strand: Reverse
Name: 91789666
Synonym: Bpro_3822
Alternate gene names: NA
Gene position: 4011922-4010990 (Counterclockwise)
Preceding gene: 91789667
Following gene: 91789656
Centisome position: 77.15
GC content: 60.99
Gene sequence:
>933_bases ATGACCGTCATGACGCAGAACACTATTCCCATGTTCCTGCCCCTGACCGGTCTCTATGAGCCATCTGCCATCCAGCAGTT GCCGGATGGGCGTTTCCTCGTGGTTGAAGATGAGAAGAAGCATCCCTTCAGTCTGGTGACTATTGACGCCAGCGGGCGTG TCAAGCGCACGTCGCTGAGCCCGGGATGGTTCCAATCCGGTGATCCCTTCTGGAAGCTGGACGACCTTGAAGGGCTCGCC CTTGATGCATCGGGGTACCTCTATGCGGTCACGTCGCATTCGCGGGACGACGTCGGCGACGAGAAGAAGTCGCGTGACAA ATTGGTACGGTTCCGAATCGAAGCCAACCGCGTGGTTGAGCCCATCGTGGTCAACGGACTGAAGCGCGCTTTGGTGGCGG CGCATCCGCTGCTCGCAGCCGCTGCCCAGATTGAAGATGTCAAAACCAGCGGTGGATTCAACATTGAGGCGCTGGAGATC TCCCCGGACCAGCAGCGATTGCTGGTTGGATTTCGCAGTCCGCTGCAGGGCAGTCATGCCATCATCGCCAGCGTTGAAAA TCTTGCTGCGATTTTTGAAGCAGACGAGGCACCGCGGGTGTCAAGCACGCTGCAGGCGCTGGACCTTGGCGGGGACGGGA TTCGCGGCATGTCCTGGATGACGTCGCTCGAGGGATACCTGGTCATCAGTGGCCCAGCCTCGCGCGAGCCAGATGAGTTC AAGCTCTGGTTCTGGAGCGGGCAGTCCGGTGTGCCGGCGCGCCGCGTCTCTGTTCCAGGCTTGCAGGGTTTCGAGCGCGC GGAAGGGGTGAGCCCGGCGGTCATCGATGGCGCACCCCGAGTTGTCATCGTCAGTGACGACGGTAGCCGCAAAGAAGGGC GCTTCGCCCGTTTTGTGCTGCTCGACCCTGGGCAACTGCAGATCGCGCCTTGA
Upstream 100 bases:
>100_bases CTTCCACTCCTGTACCAATCAACCAGCCATCGAGGGCCGTGCGGTACATGCGGCTCCTTCACGGGATTTCCGCTACCCGA AACATTTACCGCGAGAGACA
Downstream 100 bases:
>100_bases TCTGGTACTGGGGTTACCGTATCCAGACAAGCATATGCTATAAAAATAGCAGCTGATCGCAACCGCGTTTATTGGGCTAT AACACTGAATTTTTGACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MTVMTQNTIPMFLPLTGLYEPSAIQQLPDGRFLVVEDEKKHPFSLVTIDASGRVKRTSLSPGWFQSGDPFWKLDDLEGLA LDASGYLYAVTSHSRDDVGDEKKSRDKLVRFRIEANRVVEPIVVNGLKRALVAAHPLLAAAAQIEDVKTSGGFNIEALEI SPDQQRLLVGFRSPLQGSHAIIASVENLAAIFEADEAPRVSSTLQALDLGGDGIRGMSWMTSLEGYLVISGPASREPDEF KLWFWSGQSGVPARRVSVPGLQGFERAEGVSPAVIDGAPRVVIVSDDGSRKEGRFARFVLLDPGQLQIAP
Sequences:
>Translated_310_residues MTVMTQNTIPMFLPLTGLYEPSAIQQLPDGRFLVVEDEKKHPFSLVTIDASGRVKRTSLSPGWFQSGDPFWKLDDLEGLA LDASGYLYAVTSHSRDDVGDEKKSRDKLVRFRIEANRVVEPIVVNGLKRALVAAHPLLAAAAQIEDVKTSGGFNIEALEI SPDQQRLLVGFRSPLQGSHAIIASVENLAAIFEADEAPRVSSTLQALDLGGDGIRGMSWMTSLEGYLVISGPASREPDEF KLWFWSGQSGVPARRVSVPGLQGFERAEGVSPAVIDGAPRVVIVSDDGSRKEGRFARFVLLDPGQLQIAP >Mature_309_residues TVMTQNTIPMFLPLTGLYEPSAIQQLPDGRFLVVEDEKKHPFSLVTIDASGRVKRTSLSPGWFQSGDPFWKLDDLEGLAL DASGYLYAVTSHSRDDVGDEKKSRDKLVRFRIEANRVVEPIVVNGLKRALVAAHPLLAAAAQIEDVKTSGGFNIEALEIS PDQQRLLVGFRSPLQGSHAIIASVENLAAIFEADEAPRVSSTLQALDLGGDGIRGMSWMTSLEGYLVISGPASREPDEFK LWFWSGQSGVPARRVSVPGLQGFERAEGVSPAVIDGAPRVVIVSDDGSRKEGRFARFVLLDPGQLQIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33664; Mature: 33532
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVMTQNTIPMFLPLTGLYEPSAIQQLPDGRFLVVEDEKKHPFSLVTIDASGRVKRTSLS CEEEECCCCEEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEECCC PGWFQSGDPFWKLDDLEGLALDASGYLYAVTSHSRDDVGDEKKSRDKLVRFRIEANRVVE CCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCHHHHHCEEEEEEEECCCCCC PIVVNGLKRALVAAHPLLAAAAQIEDVKTSGGFNIEALEISPDQQRLLVGFRSPLQGSHA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHEEEEEECCCCCCCCE IIASVENLAAIFEADEAPRVSSTLQALDLGGDGIRGMSWMTSLEGYLVISGPASREPDEF EEEEHHHHHHHHCCCCCCCHHHHHHHEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCE KLWFWSGQSGVPARRVSVPGLQGFERAEGVSPAVIDGAPRVVIVSDDGSRKEGRFARFVL EEEEEECCCCCCEEEEECCCCCCHHHHCCCCCEEECCCCEEEEECCCCCCCCCCEEEEEE LDPGQLQIAP ECCCCEEECC >Mature Secondary Structure TVMTQNTIPMFLPLTGLYEPSAIQQLPDGRFLVVEDEKKHPFSLVTIDASGRVKRTSLS EEEECCCCEEEEEECCCCCCHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCEEEECCC PGWFQSGDPFWKLDDLEGLALDASGYLYAVTSHSRDDVGDEKKSRDKLVRFRIEANRVVE CCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCHHHHHCEEEEEEEECCCCCC PIVVNGLKRALVAAHPLLAAAAQIEDVKTSGGFNIEALEISPDQQRLLVGFRSPLQGSHA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHEEEEEECCCCCCCCE IIASVENLAAIFEADEAPRVSSTLQALDLGGDGIRGMSWMTSLEGYLVISGPASREPDEF EEEEHHHHHHHHCCCCCCCHHHHHHHEECCCCCCCCHHHHHCCCCEEEEECCCCCCCCCE KLWFWSGQSGVPARRVSVPGLQGFERAEGVSPAVIDGAPRVVIVSDDGSRKEGRFARFVL EEEEEECCCCCCEEEEECCCCCCHHHHCCCCCEEECCCCEEEEECCCCCCCCCCEEEEEE LDPGQLQIAP ECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA