Click here to switch to the map view.

The map label for this gene is yurN [H]

Identifier: 91789660

GI number: 91789660

Start: 4005310

End: 4006293

Strand: Direct

Name: yurN [H]

Synonym: Bpro_3816

Alternate gene names: 91789660

Gene position: 4005310-4006293 (Clockwise)

Preceding gene: 91789659

Following gene: 91789661

Centisome position: 77.02

GC content: 60.98

Gene sequence:

>984_bases
ATGCCGTCCATGTCCAATTCCATTTCGAACGCCTTGCCCGCCCCAAAACCCGGTTGGCGCCCGAAACTCGGCGCGTTGCT
GGCGCCACCCGAGGCTGACTCGCGGCGCACCTCATGGCCGACCCTGATGCTGTTTCTCGCACCGGCGCTTCTGGTGTACG
CGGCGCTGACGGCCTATCCCGTGGTGCGGACGTTCTACAACAGCTTTTTCATCATCAACGACATCGCCTCGTCGGATTTC
GTGGGCCTGGCCCATTTCGCCGAGGTGTTCCGTGACGCCACCTTTCTTGCGGCGGTGCGCAACACGGCCATCTGGTCCAC
CGTGGCACCGTTTCTCGATGTCATCACCGGTTTATTGCTGGCACTCTGTCTGTACGCGGGTGTGCCGTTCGCCCGTTTTC
TGCGGGTGGCCTGGTTCACGCCGGTGCTGCTGTCCTATGTGGTGGTCGGAATCATGTGGGTCTGGATCTACAACTACGAC
TGGGGCGTGGTCAACGTCGCCCTGCGCAACGTCGGCTTGGGGCATTGGGCGCAGGCCTGGATCGGCGACCCCAGCTTCGC
GCTGGCCTCGCTCATGGTGACACATGCCTGGAAATGGGCGGGCTTCAACATGGTGGTCTGCCTCGCCGCCCTTCATTCAC
TGCCCTCCGAGGTGCTCGAAGCCGCTGAACTCGACAACTGCGGCTGGTGGGACAAGCTGGTGCACGTCATCGTGCCCATG
CTGTGGCCGACCCTGCTCAACCTCTACATCCTGGCCTTCATTGGCAAGATGAAGGTGTTTGACCTGGTCTGGATCATGAC
CGAGGGTGGCCCCGTGTGGTCTACCGAGACGGTATCTACCTATGTGTACAAGCGTGCCTTCAACTGGAACACCTTCGACC
TCGGCTATCCGTCGGCCATCGCCGTGGTGTGGTTCTTTGTGGTGGTGGGCTTCGTTGTGTTCTTCAACGTGCTGTTTCGC
CGCCGCGAACGTCTGGAATACTAA

Upstream 100 bases:

>100_bases
GGTACTCAATCGCGCCTTTCCCGCCGGTCTGATCAGCGTCAAGGACGCGGCTGGCCAGATGGACGCAGCTTGCAAAGCGG
CTTCCTGACGTTTTTCCGAG

Downstream 100 bases:

>100_bases
AAATGCGTGCTTCCAACTCCTTTGGCGACTCGGTTTCGCGCCTGCTGCGACAGGGCGGGCTGATGGCTGTCATCGTCCTG
TACACCCTGTACTCGGCGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MPSMSNSISNALPAPKPGWRPKLGALLAPPEADSRRTSWPTLMLFLAPALLVYAALTAYPVVRTFYNSFFIINDIASSDF
VGLAHFAEVFRDATFLAAVRNTAIWSTVAPFLDVITGLLLALCLYAGVPFARFLRVAWFTPVLLSYVVVGIMWVWIYNYD
WGVVNVALRNVGLGHWAQAWIGDPSFALASLMVTHAWKWAGFNMVVCLAALHSLPSEVLEAAELDNCGWWDKLVHVIVPM
LWPTLLNLYILAFIGKMKVFDLVWIMTEGGPVWSTETVSTYVYKRAFNWNTFDLGYPSAIAVVWFFVVVGFVVFFNVLFR
RRERLEY

Sequences:

>Translated_327_residues
MPSMSNSISNALPAPKPGWRPKLGALLAPPEADSRRTSWPTLMLFLAPALLVYAALTAYPVVRTFYNSFFIINDIASSDF
VGLAHFAEVFRDATFLAAVRNTAIWSTVAPFLDVITGLLLALCLYAGVPFARFLRVAWFTPVLLSYVVVGIMWVWIYNYD
WGVVNVALRNVGLGHWAQAWIGDPSFALASLMVTHAWKWAGFNMVVCLAALHSLPSEVLEAAELDNCGWWDKLVHVIVPM
LWPTLLNLYILAFIGKMKVFDLVWIMTEGGPVWSTETVSTYVYKRAFNWNTFDLGYPSAIAVVWFFVVVGFVVFFNVLFR
RRERLEY
>Mature_326_residues
PSMSNSISNALPAPKPGWRPKLGALLAPPEADSRRTSWPTLMLFLAPALLVYAALTAYPVVRTFYNSFFIINDIASSDFV
GLAHFAEVFRDATFLAAVRNTAIWSTVAPFLDVITGLLLALCLYAGVPFARFLRVAWFTPVLLSYVVVGIMWVWIYNYDW
GVVNVALRNVGLGHWAQAWIGDPSFALASLMVTHAWKWAGFNMVVCLAALHSLPSEVLEAAELDNCGWWDKLVHVIVPML
WPTLLNLYILAFIGKMKVFDLVWIMTEGGPVWSTETVSTYVYKRAFNWNTFDLGYPSAIAVVWFFVVVGFVVFFNVLFRR
RERLEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=294, Percent_Identity=26.1904761904762, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=26.0700389105058, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787570, Length=279, Percent_Identity=26.8817204301075, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36881; Mature: 36749

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSMSNSISNALPAPKPGWRPKLGALLAPPEADSRRTSWPTLMLFLAPALLVYAALTAYP
CCCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VVRTFYNSFFIINDIASSDFVGLAHFAEVFRDATFLAAVRNTAIWSTVAPFLDVITGLLL
HHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALCLYAGVPFARFLRVAWFTPVLLSYVVVGIMWVWIYNYDWGVVNVALRNVGLGHWAQAW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH
IGDPSFALASLMVTHAWKWAGFNMVVCLAALHSLPSEVLEAAELDNCGWWDKLVHVIVPM
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LWPTLLNLYILAFIGKMKVFDLVWIMTEGGPVWSTETVSTYVYKRAFNWNTFDLGYPSAI
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
AVVWFFVVVGFVVFFNVLFRRRERLEY
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PSMSNSISNALPAPKPGWRPKLGALLAPPEADSRRTSWPTLMLFLAPALLVYAALTAYP
CCCCCHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VVRTFYNSFFIINDIASSDFVGLAHFAEVFRDATFLAAVRNTAIWSTVAPFLDVITGLLL
HHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALCLYAGVPFARFLRVAWFTPVLLSYVVVGIMWVWIYNYDWGVVNVALRNVGLGHWAQAW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHH
IGDPSFALASLMVTHAWKWAGFNMVVCLAALHSLPSEVLEAAELDNCGWWDKLVHVIVPM
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
LWPTLLNLYILAFIGKMKVFDLVWIMTEGGPVWSTETVSTYVYKRAFNWNTFDLGYPSAI
HHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHH
AVVWFFVVVGFVVFFNVLFRRRERLEY
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]