| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789632
Identifier: 91789632
GI number: 91789632
Start: 3973928
End: 3974350
Strand: Reverse
Name: 91789632
Synonym: Bpro_3787
Alternate gene names: NA
Gene position: 3974350-3973928 (Counterclockwise)
Preceding gene: 91789634
Following gene: 91789631
Centisome position: 76.43
GC content: 62.17
Gene sequence:
>423_bases ATGTCCAACGCCAATCATTTCTACGAACCCCGTCACGGCCACGGCCTGCCCCACGACCCGTTCAACGCCATCGTCGGGCC GCGCCCGATCGGCTGGATTTCGTCGCGCAATGCAGAGGGCGCACTCAACCTGGCGCCTTACAGCTTTTTCAACGCCTTTA ACTACACCCCGCCCATCGTGGGGTTTGCCAGCATCGGCTACAAGGACACGGTGCGCAACGTCGAGCAGACGGGCGAGTTC GCCTGGAACCTGGCCACGCGGCCGCTGGCTGAAGCCATGAACCAGACTTGCGCCCCGGTACCGCCCGAGGTCAGTGAATT CGGCCTGGCCGGATTGACGCCCGTGGATTCGCGCGTGATAGAGGTACAGCGAGTTGCCGAAAGCCCGGTTTCGTGTGAAC CGACACATGGTCTTAGGAAGTGA
Upstream 100 bases:
>100_bases GGCGACCGCGACCCCCCTGCACGAGAGGCATGGCGGCAGTGTGGCAGGGCGTTTGAGGTTATCGTCGGCTCCAGACTCAC AGCGGAATTGCGAACAGCCC
Downstream 100 bases:
>100_bases TGGGATGGGGCGGGTTGTGGCGGGATGATGCGGAACGTGTTGAAAACATTGGGGTTTCTGGGAATCTGGGGCTGACGGGG TGCCCCACCTTTGCGGCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSNANHFYEPRHGHGLPHDPFNAIVGPRPIGWISSRNAEGALNLAPYSFFNAFNYTPPIVGFASIGYKDTVRNVEQTGEF AWNLATRPLAEAMNQTCAPVPPEVSEFGLAGLTPVDSRVIEVQRVAESPVSCEPTHGLRK
Sequences:
>Translated_140_residues MSNANHFYEPRHGHGLPHDPFNAIVGPRPIGWISSRNAEGALNLAPYSFFNAFNYTPPIVGFASIGYKDTVRNVEQTGEF AWNLATRPLAEAMNQTCAPVPPEVSEFGLAGLTPVDSRVIEVQRVAESPVSCEPTHGLRK >Mature_139_residues SNANHFYEPRHGHGLPHDPFNAIVGPRPIGWISSRNAEGALNLAPYSFFNAFNYTPPIVGFASIGYKDTVRNVEQTGEFA WNLATRPLAEAMNQTCAPVPPEVSEFGLAGLTPVDSRVIEVQRVAESPVSCEPTHGLRK
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavoredoxin family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002563 - InterPro: IPR012349 - InterPro: IPR009002 [H]
Pfam domain/function: PF01613 Flavin_Reduct [H]
EC number: NA
Molecular weight: Translated: 15288; Mature: 15157
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNANHFYEPRHGHGLPHDPFNAIVGPRPIGWISSRNAEGALNLAPYSFFNAFNYTPPIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCC GFASIGYKDTVRNVEQTGEFAWNLATRPLAEAMNQTCAPVPPEVSEFGLAGLTPVDSRVI CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHH EVQRVAESPVSCEPTHGLRK HHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SNANHFYEPRHGHGLPHDPFNAIVGPRPIGWISSRNAEGALNLAPYSFFNAFNYTPPIV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCHHHHHCCCCCCCCC GFASIGYKDTVRNVEQTGEFAWNLATRPLAEAMNQTCAPVPPEVSEFGLAGLTPVDSRVI CHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHH EVQRVAESPVSCEPTHGLRK HHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]