| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789634
Identifier: 91789634
GI number: 91789634
Start: 3975442
End: 3976365
Strand: Reverse
Name: 91789634
Synonym: Bpro_3789
Alternate gene names: NA
Gene position: 3976365-3975442 (Counterclockwise)
Preceding gene: 91789637
Following gene: 91789632
Centisome position: 76.46
GC content: 69.16
Gene sequence:
>924_bases TTGCCCTCAAACCTGAATCCCCTTGGCGCCCTGCCTTTTCGCTTTCGCCGCGAGCGCGTTCTCATCGTCGGTTGTGGCGA CGTCGGCCTGCGGGTGTCCCGCCAGCTCCGCGGCCGTGTTGGCCTGATGGCCCTGACCTCATCGACAGACCGCCTGCCCG AACTGCGCGCGCACGGCGTCACCCCCTTGCTGGGCAATCTGGACGACAGCGCCAGCCTGCGCCGGCTGGCCGGCCTGGCG ACCCGCGTCGTGCATCTGGCGCCGCCTCCCGGCGACAACCCTGACTGGCGCAGCGATCCACGCACCCTGGCCCTGCTCAG GATCCTGCGTTTACGCGGCCGGCCACAGTCGCTGGTCTATGGCTCAACCAGCGGTGTCTACGGTGACTGCCAAGGCGACT GGGTCAGCGAAACGCGGGGCGTCAATCCGAACACGCCCCGGGCCGTGCGCCGCGTGCATGCGGAAGCCCTGGTGCGCCTG TTCGGGCGCGCGACCGCGGCGCACACGCACATCCTGCGGATCCCCGGCATTTACGCCCCTGACCGCGAAGGCGGCACCCC GCGCGGGCGACTGCTCAAGGGAACACCTGTGCTGCGCGCGCAGGACGACGTCTACACCAACCACATCCACGCGGATGACC TGGCCCGCGCCTGCGTCGCGGCCCTGTGGCGCGGCAAGCCGCAACGGGTCACCAACGCCAGCGACGACACGCAGATGAAG ATGGGCGACTACTTCGACCTGGCGGCCGACCTGTACCAGCTGCCACGGCCTGCGCGCCTGCCGCGAAGCACCGCCAGGGA ACAGTTACCGCTGATGCTGCTGAGTTTCATGGGCGAGTCGCGGCGGCTGGACAACCGGCGGATGAAGGAGGAGTTGAAGC TGGTGCTGCGTTACCCGACAGTGGAGGAGGGGTTGCGGGCCTGA
Upstream 100 bases:
>100_bases GACCCGCCCGCTGGGCTGAACGCTCACGTTGAAACTCATATTGGGTATCCTTGCGGTTTCTGTTGTCTGACCTGGCTGGT TTTCCAGCCAACCCCCAATT
Downstream 100 bases:
>100_bases GGCGAGCCGCAGGCGCAGCGTGCAGCAGGGCGACCCTTCCGCTGCGCGGGAAAAGGGAAAAGGGAAAAGGGAACGCCTTT TTCTTCTCAATAGGCTCTCG
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; Phosphate ABC Transporter Permease; ActC Family Protein; NAD-Dependent Epimerase; Actc Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MPSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGVTPLLGNLDDSASLRRLAGLA TRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVYGSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRL FGRATAAHTHILRIPGIYAPDREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPTVEEGLRA
Sequences:
>Translated_307_residues MPSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGVTPLLGNLDDSASLRRLAGLA TRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVYGSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRL FGRATAAHTHILRIPGIYAPDREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPTVEEGLRA >Mature_306_residues PSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGVTPLLGNLDDSASLRRLAGLAT RVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVYGSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRLF GRATAAHTHILRIPGIYAPDREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMKM GDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPTVEEGLRA
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34175; Mature: 34044
Theoretical pI: Translated: 11.31; Mature: 11.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGV CCCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHCCC TPLLGNLDDSASLRRLAGLATRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVY CHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE GSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRLFGRATAAHTHILRIPGIYAP ECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC DREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK CCCCCCCCCCEEECCCCEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPT CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC VEEGLRA HHHHCCC >Mature Secondary Structure PSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGV CCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHCCC TPLLGNLDDSASLRRLAGLATRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVY CHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE GSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRLFGRATAAHTHILRIPGIYAP ECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC DREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK CCCCCCCCCCEEECCCCEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPT CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC VEEGLRA HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA