Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789634

Identifier: 91789634

GI number: 91789634

Start: 3975442

End: 3976365

Strand: Reverse

Name: 91789634

Synonym: Bpro_3789

Alternate gene names: NA

Gene position: 3976365-3975442 (Counterclockwise)

Preceding gene: 91789637

Following gene: 91789632

Centisome position: 76.46

GC content: 69.16

Gene sequence:

>924_bases
TTGCCCTCAAACCTGAATCCCCTTGGCGCCCTGCCTTTTCGCTTTCGCCGCGAGCGCGTTCTCATCGTCGGTTGTGGCGA
CGTCGGCCTGCGGGTGTCCCGCCAGCTCCGCGGCCGTGTTGGCCTGATGGCCCTGACCTCATCGACAGACCGCCTGCCCG
AACTGCGCGCGCACGGCGTCACCCCCTTGCTGGGCAATCTGGACGACAGCGCCAGCCTGCGCCGGCTGGCCGGCCTGGCG
ACCCGCGTCGTGCATCTGGCGCCGCCTCCCGGCGACAACCCTGACTGGCGCAGCGATCCACGCACCCTGGCCCTGCTCAG
GATCCTGCGTTTACGCGGCCGGCCACAGTCGCTGGTCTATGGCTCAACCAGCGGTGTCTACGGTGACTGCCAAGGCGACT
GGGTCAGCGAAACGCGGGGCGTCAATCCGAACACGCCCCGGGCCGTGCGCCGCGTGCATGCGGAAGCCCTGGTGCGCCTG
TTCGGGCGCGCGACCGCGGCGCACACGCACATCCTGCGGATCCCCGGCATTTACGCCCCTGACCGCGAAGGCGGCACCCC
GCGCGGGCGACTGCTCAAGGGAACACCTGTGCTGCGCGCGCAGGACGACGTCTACACCAACCACATCCACGCGGATGACC
TGGCCCGCGCCTGCGTCGCGGCCCTGTGGCGCGGCAAGCCGCAACGGGTCACCAACGCCAGCGACGACACGCAGATGAAG
ATGGGCGACTACTTCGACCTGGCGGCCGACCTGTACCAGCTGCCACGGCCTGCGCGCCTGCCGCGAAGCACCGCCAGGGA
ACAGTTACCGCTGATGCTGCTGAGTTTCATGGGCGAGTCGCGGCGGCTGGACAACCGGCGGATGAAGGAGGAGTTGAAGC
TGGTGCTGCGTTACCCGACAGTGGAGGAGGGGTTGCGGGCCTGA

Upstream 100 bases:

>100_bases
GACCCGCCCGCTGGGCTGAACGCTCACGTTGAAACTCATATTGGGTATCCTTGCGGTTTCTGTTGTCTGACCTGGCTGGT
TTTCCAGCCAACCCCCAATT

Downstream 100 bases:

>100_bases
GGCGAGCCGCAGGCGCAGCGTGCAGCAGGGCGACCCTTCCGCTGCGCGGGAAAAGGGAAAAGGGAAAAGGGAACGCCTTT
TTCTTCTCAATAGGCTCTCG

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; Nucleoside-Diphosphate-Sugar Epimerases; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; NAD Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; Phosphate ABC Transporter Permease; ActC Family Protein; NAD-Dependent Epimerase; Actc Protein; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MPSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGVTPLLGNLDDSASLRRLAGLA
TRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVYGSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRL
FGRATAAHTHILRIPGIYAPDREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK
MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPTVEEGLRA

Sequences:

>Translated_307_residues
MPSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGVTPLLGNLDDSASLRRLAGLA
TRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVYGSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRL
FGRATAAHTHILRIPGIYAPDREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK
MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPTVEEGLRA
>Mature_306_residues
PSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGVTPLLGNLDDSASLRRLAGLAT
RVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVYGSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRLF
GRATAAHTHILRIPGIYAPDREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMKM
GDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPTVEEGLRA

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34175; Mature: 34044

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGV
CCCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHCCC
TPLLGNLDDSASLRRLAGLATRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVY
CHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
GSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRLFGRATAAHTHILRIPGIYAP
ECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
DREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK
CCCCCCCCCCEEECCCCEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPT
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
VEEGLRA
HHHHCCC
>Mature Secondary Structure 
PSNLNPLGALPFRFRRERVLIVGCGDVGLRVSRQLRGRVGLMALTSSTDRLPELRAHGV
CCCCCCCCCCCHHCCCCEEEEEECCCCCHHHHHHHHCCEEEEEECCCCCCCHHHHHCCC
TPLLGNLDDSASLRRLAGLATRVVHLAPPPGDNPDWRSDPRTLALLRILRLRGRPQSLVY
CHHHCCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
GSTSGVYGDCQGDWVSETRGVNPNTPRAVRRVHAEALVRLFGRATAAHTHILRIPGIYAP
ECCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC
DREGGTPRGRLLKGTPVLRAQDDVYTNHIHADDLARACVAALWRGKPQRVTNASDDTQMK
CCCCCCCCCCEEECCCCEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
MGDYFDLAADLYQLPRPARLPRSTAREQLPLMLLSFMGESRRLDNRRMKEELKLVLRYPT
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
VEEGLRA
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA