Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789630

Identifier: 91789630

GI number: 91789630

Start: 3972890

End: 3973429

Strand: Direct

Name: 91789630

Synonym: Bpro_3785

Alternate gene names: NA

Gene position: 3972890-3973429 (Clockwise)

Preceding gene: 91789629

Following gene: 91789633

Centisome position: 76.4

GC content: 63.15

Gene sequence:

>540_bases
ATGGCAACTGACATCAAGATTCTTGCCAAAAATGAGCAGATAAAACGTGCGCTGAGCCGCGTTATGAGCACGCTTCCGGC
CGGTGGCGATGGCACCCCGGTCATGCGGTCGATTGGGCGCGTACTTTTAACCGGCTTGCAGCTGCGATTCAGGGCTCAAA
AAGCCCCAGACGGCACGCCCTGGAAGCCCTCGCAGCGCGTCAAAAGGGAGGGCGGCCAAACCCTGCGCGATACCGGCATG
CTGCGCGACTCTTTCAGCGCAAGTGCGACCAGCAGCAGGGCCCAGGTGGGCACCAACAGCATCAAGGCCGCCATCCACCA
GTTCGGCGGCACCATCAAGCACCCCGGAGGCACCCGTTACGTCATCGTGGACGGCATGGCCCGGTTCGTCAGCAACAGCC
TGGTGGGGCCGGTCAGCGGGGTCACCAAACCCCACCCGATTGACATGCCGGCCAGGCCCATGCTGGGCGATTCAGACGCC
GACCGGCTCGAAATCCTGTCCGTCCTGGAGACCCACTTCAAGGGCCGGTGGTCGCAATGA

Upstream 100 bases:

>100_bases
ATTCCCAAGGGCATAGACCCCGGTTTTGGCTACAACCCCGGCACCGAGCAGGGCAAGGCCTTGCAAGAGGCGCTCGCAGC
CAAGGTGAAGGCCTTCAAAG

Downstream 100 bases:

>100_bases
GCCAATGGCCTGTGGATAACCCGGCTTTGAAGCCACTACCAGGCGGGATTGAAGCCCCCTTCAGGGGCAGCTAAAGGTGG
GGCATGGTGCCCCACCTTTG

Product: phage virion morphogenesis protein

Products: NA

Alternate protein names: Virion Morphogenesis Protein; Mu-Like Prophage Protein

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MATDIKILAKNEQIKRALSRVMSTLPAGGDGTPVMRSIGRVLLTGLQLRFRAQKAPDGTPWKPSQRVKREGGQTLRDTGM
LRDSFSASATSSRAQVGTNSIKAAIHQFGGTIKHPGGTRYVIVDGMARFVSNSLVGPVSGVTKPHPIDMPARPMLGDSDA
DRLEILSVLETHFKGRWSQ

Sequences:

>Translated_179_residues
MATDIKILAKNEQIKRALSRVMSTLPAGGDGTPVMRSIGRVLLTGLQLRFRAQKAPDGTPWKPSQRVKREGGQTLRDTGM
LRDSFSASATSSRAQVGTNSIKAAIHQFGGTIKHPGGTRYVIVDGMARFVSNSLVGPVSGVTKPHPIDMPARPMLGDSDA
DRLEILSVLETHFKGRWSQ
>Mature_178_residues
ATDIKILAKNEQIKRALSRVMSTLPAGGDGTPVMRSIGRVLLTGLQLRFRAQKAPDGTPWKPSQRVKREGGQTLRDTGML
RDSFSASATSSRAQVGTNSIKAAIHQFGGTIKHPGGTRYVIVDGMARFVSNSLVGPVSGVTKPHPIDMPARPMLGDSDAD
RLEILSVLETHFKGRWSQ

Specific function: Unknown

COG id: COG5005

COG function: function code R; Mu-like prophage protein gpG

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19333; Mature: 19201

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDIKILAKNEQIKRALSRVMSTLPAGGDGTPVMRSIGRVLLTGLQLRFRAQKAPDGTP
CCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCC
WKPSQRVKREGGQTLRDTGMLRDSFSASATSSRAQVGTNSIKAAIHQFGGTIKHPGGTRY
CCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCEE
VIVDGMARFVSNSLVGPVSGVTKPHPIDMPARPMLGDSDADRLEILSVLETHFKGRWSQ
EEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ATDIKILAKNEQIKRALSRVMSTLPAGGDGTPVMRSIGRVLLTGLQLRFRAQKAPDGTP
CCCEEEEECCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCC
WKPSQRVKREGGQTLRDTGMLRDSFSASATSSRAQVGTNSIKAAIHQFGGTIKHPGGTRY
CCHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEECCCCCEE
VIVDGMARFVSNSLVGPVSGVTKPHPIDMPARPMLGDSDADRLEILSVLETHFKGRWSQ
EEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA