| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789596
Identifier: 91789596
GI number: 91789596
Start: 3953731
End: 3954225
Strand: Direct
Name: 91789596
Synonym: Bpro_3751
Alternate gene names: NA
Gene position: 3953731-3954225 (Clockwise)
Preceding gene: 91789595
Following gene: 91789597
Centisome position: 76.03
GC content: 67.07
Gene sequence:
>495_bases ATGACCGTTGGACAAAAAGTGGGCGGCAAGCGGCTCCCCGCGTTCCTGCAAATGGCCTCGGCCAACCTGGCGTACGCCCT GGCTTCCGGCCCCTGTTTGGGCAGCAAGCCACCCTTCGCCTTCAAGAGCGACCGACCCTCGGGATCAAAACCCATCGTAG AACGCCGTAGAACGGGGTCAGGTTGCGTCGTTGCGACCGGGCCGCACCACCCGGTGCTTGAAGGCATGTTCCCGGCCCGC ACGGCCCCGATTGAAACCGCTGCCGAATTGCGCCAGGCATTGGGCCACCTGATGGCCCGCGACGACCTGCAGATCACCGG CCTCGCCGCCACCCTGGGCGTCAACGCGCACAGCCTCGGCCTGCTCATGCGCGGCCAATACGTCGGCAAGCCACGCACCA TGCTGCAGGCTTTCAAGCGCTACCAGGAGCGCACCCAGGGCCGCTGCCGCGCCTGCGGCCAGCCCACCCCCCAGACACAG GCGGCTACTGTATGA
Upstream 100 bases:
>100_bases CCAAGATATTGGGGCGCATGCCCTTCGGCCCACCGGGTAAGCGGGGCCGCAAGAAAACCGTGTGGGAGGGTCGCGTAGCC AGCGCCGAGACGGAGGCTGC
Downstream 100 bases:
>100_bases GCGCCGTCGCCAAAGACTGGCTCACCGCCAACGAGCTGCTCGGCCTGCCCAACATGCCGGCCGACAAGCGGGGAGTGCAC CGCAAGGCGCTGGCCTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTVGQKVGGKRLPAFLQMASANLAYALASGPCLGSKPPFAFKSDRPSGSKPIVERRRTGSGCVVATGPHHPVLEGMFPAR TAPIETAAELRQALGHLMARDDLQITGLAATLGVNAHSLGLLMRGQYVGKPRTMLQAFKRYQERTQGRCRACGQPTPQTQ AATV
Sequences:
>Translated_164_residues MTVGQKVGGKRLPAFLQMASANLAYALASGPCLGSKPPFAFKSDRPSGSKPIVERRRTGSGCVVATGPHHPVLEGMFPAR TAPIETAAELRQALGHLMARDDLQITGLAATLGVNAHSLGLLMRGQYVGKPRTMLQAFKRYQERTQGRCRACGQPTPQTQ AATV >Mature_163_residues TVGQKVGGKRLPAFLQMASANLAYALASGPCLGSKPPFAFKSDRPSGSKPIVERRRTGSGCVVATGPHHPVLEGMFPART APIETAAELRQALGHLMARDDLQITGLAATLGVNAHSLGLLMRGQYVGKPRTMLQAFKRYQERTQGRCRACGQPTPQTQA ATV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17439; Mature: 17307
Theoretical pI: Translated: 11.12; Mature: 11.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGQKVGGKRLPAFLQMASANLAYALASGPCLGSKPPFAFKSDRPSGSKPIVERRRTGS CCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC GCVVATGPHHPVLEGMFPARTAPIETAAELRQALGHLMARDDLQITGLAATLGVNAHSLG CEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH LLMRGQYVGKPRTMLQAFKRYQERTQGRCRACGQPTPQTQAATV HEECCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC >Mature Secondary Structure TVGQKVGGKRLPAFLQMASANLAYALASGPCLGSKPPFAFKSDRPSGSKPIVERRRTGS CCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCC GCVVATGPHHPVLEGMFPARTAPIETAAELRQALGHLMARDDLQITGLAATLGVNAHSLG CEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHCCCHHHHH LLMRGQYVGKPRTMLQAFKRYQERTQGRCRACGQPTPQTQAATV HEECCCCCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA