| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789538
Identifier: 91789538
GI number: 91789538
Start: 3903435
End: 3903971
Strand: Reverse
Name: 91789538
Synonym: Bpro_3691
Alternate gene names: NA
Gene position: 3903971-3903435 (Counterclockwise)
Preceding gene: 91789539
Following gene: 91789537
Centisome position: 75.07
GC content: 61.27
Gene sequence:
>537_bases ATGAGTGATCTGTCTGAGCAACGGCAACTCCCCAAAAGCTGGGACCAACCTGAGGGGGCGAGTTTCGCGTCCTGGATGGA AAGCCGTGTTGCGCGCTTTTCCACCCGCAAGTATGACTTTGACGCCCTGAAGTTCCAGGCGGACTTCGATCCCAAATACC GCCGTGGCCAGATGCGCTATATCGGCACCGGAGGCACCGGTGTCGCCTCGGACAGCACCACCATCCCGGCGGAAAACTTC ACCTTCTCGACCATGGTGATCCCGGCCGGCCACGAAGGCCCCTCGCACCTGCACGTCGACGTGGAGGAGGTGTTCTTCCT CATCCGCGGCAAGCTCAAGCTGGTGCTGGAAAAAGACGGCGAGCGTTTTGAAACCATCCTGACCGACCGCGACGTCGTCT CGGTGCCGCCGGGCGTGTATCGCGAGGAAATCAACATCGGCGACGAAGACGCGCTGATGTGCGTGATGCTGGGCAACAAG AAGCCCATCACGCCCACCTATCCGCCCGAGCACCCGCTCGCCAAGATCAAGCGCTGA
Upstream 100 bases:
>100_bases TCGTCACCGGCCAGGTTCTCGCCGTCAATGGCGGCTTCGTCATGCGCTGAACGCGCAAAACCCGAAAAACCCGCTAAACG CAATTTCAAAGGAGTGAACA
Downstream 100 bases:
>100_bases GCGCATCTGCCATGAACGCCGTGCCCCGCACCGCTGACGATCTGCTGCAGGCGCCGCTCGCGCTGCTGGATAGTCGCTTT CCCCAGCGCATCGTGCCGCT
Product: cupin 2 barrel-domain containing protein
Products: NA
Alternate protein names: Cupin Region; Cupin Domain-Containing Protein; Cupin 2 Barrel; Cupin 2 Conserved Barrel Domain Protein; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin 2 Conserved Barrel; Cupin 2 Protein
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSDLSEQRQLPKSWDQPEGASFASWMESRVARFSTRKYDFDALKFQADFDPKYRRGQMRYIGTGGTGVASDSTTIPAENF TFSTMVIPAGHEGPSHLHVDVEEVFFLIRGKLKLVLEKDGERFETILTDRDVVSVPPGVYREEINIGDEDALMCVMLGNK KPITPTYPPEHPLAKIKR
Sequences:
>Translated_178_residues MSDLSEQRQLPKSWDQPEGASFASWMESRVARFSTRKYDFDALKFQADFDPKYRRGQMRYIGTGGTGVASDSTTIPAENF TFSTMVIPAGHEGPSHLHVDVEEVFFLIRGKLKLVLEKDGERFETILTDRDVVSVPPGVYREEINIGDEDALMCVMLGNK KPITPTYPPEHPLAKIKR >Mature_177_residues SDLSEQRQLPKSWDQPEGASFASWMESRVARFSTRKYDFDALKFQADFDPKYRRGQMRYIGTGGTGVASDSTTIPAENFT FSTMVIPAGHEGPSHLHVDVEEVFFLIRGKLKLVLEKDGERFETILTDRDVVSVPPGVYREEINIGDEDALMCVMLGNKK PITPTYPPEHPLAKIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20126; Mature: 19995
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSEQRQLPKSWDQPEGASFASWMESRVARFSTRKYDFDALKFQADFDPKYRRGQMRY CCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEE IGTGGTGVASDSTTIPAENFTFSTMVIPAGHEGPSHLHVDVEEVFFLIRGKLKLVLEKDG EECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHHHHCCEEEEEECCC ERFETILTDRDVVSVPPGVYREEINIGDEDALMCVMLGNKKPITPTYPPEHPLAKIKR CCEEHHHCCCCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure SDLSEQRQLPKSWDQPEGASFASWMESRVARFSTRKYDFDALKFQADFDPKYRRGQMRY CCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEE IGTGGTGVASDSTTIPAENFTFSTMVIPAGHEGPSHLHVDVEEVFFLIRGKLKLVLEKDG EECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHHHHCCEEEEEECCC ERFETILTDRDVVSVPPGVYREEINIGDEDALMCVMLGNKKPITPTYPPEHPLAKIKR CCEEHHHCCCCEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA