| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789507
Identifier: 91789507
GI number: 91789507
Start: 3855415
End: 3855780
Strand: Reverse
Name: 91789507
Synonym: Bpro_3657
Alternate gene names: NA
Gene position: 3855780-3855415 (Counterclockwise)
Preceding gene: 91789508
Following gene: 91789506
Centisome position: 74.15
GC content: 59.56
Gene sequence:
>366_bases ATGGATGAGCTGTTACCCCTGTGCAATGCCAGCGACCTGGTCGAAGGCGGGGAGGCAGTGCCCTTCGATATCGACTATGC CGGTCTGACCTGCCGGGCTTTTGCCATTCGCTTCGAGGGCCTGCCGCATGCTTACCTGAACCGCTGCACGCATGTGGCCA TGGAACTCGACTGGCAGCCCAACCAGGTGTTTGACGACAGCGGACAATGGCTGCTGTGCGCCAGCCATGGTGCGGCTTAC CGGCCTGATACCGGCCAGTGCGCAGGCGGCCCCTGCCAGGGCGGGTTGATCAAAATCACGCTTTCGGAAAATGACGGGGT TGTTTATTGGCATTCCGCTTACAACCTCAGACCGGTACAGTTCTAA
Upstream 100 bases:
>100_bases CCTGGCGCCGCGCCACGTGGCCCATTCGGTGCAGGACCTCCATGACTGGCTGCTGGCCAATGGCTAGTAATGGCTAGTAC TAGCGACTGAAGGGCTTCCT
Downstream 100 bases:
>100_bases TACTTCTCTAAACTAGCGACCATGAACGAATCCAACCGCCCCGACAATCCGAACGACACCTCTCCTGATCTCCTGCGGGA GTCGGATTTCAGGCCGAACC
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: Rieske Domain-Containing Protein; Rieske Region; Ferredoxin; Rieske Protein; Rieske; Rieske 2Fe-2S Family Protein; Rieske Iron-Sulfur Domain Protein; Ferredoxin Protein; Nitrite Reductase Ferredoxin Subunit; Rieske Iron-Sulfur Domain-Containing Protein
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQPNQVFDDSGQWLLCASHGAAY RPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQF
Sequences:
>Translated_121_residues MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQPNQVFDDSGQWLLCASHGAAY RPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQF >Mature_121_residues MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQPNQVFDDSGQWLLCASHGAAY RPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQF
Specific function: Unknown
COG id: COG2146
COG function: function code PR; Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13292; Mature: 13292
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQP CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHEEEEEEECCCC NQVFDDSGQWLLCASHGAAYRPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQ CEEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEC F C >Mature Secondary Structure MDELLPLCNASDLVEGGEAVPFDIDYAGLTCRAFAIRFEGLPHAYLNRCTHVAMELDWQP CCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCCCHHHHHHHEEEEEEECCCC NQVFDDSGQWLLCASHGAAYRPDTGQCAGGPCQGGLIKITLSENDGVVYWHSAYNLRPVQ CEEECCCCCEEEEECCCCEECCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCCEEEEC F C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA