Click here to switch to the map view.

The map label for this gene is recO

Identifier: 91789483

GI number: 91789483

Start: 3834662

End: 3835411

Strand: Reverse

Name: recO

Synonym: Bpro_3633

Alternate gene names: 91789483

Gene position: 3835411-3834662 (Counterclockwise)

Preceding gene: 91789484

Following gene: 91789482

Centisome position: 73.75

GC content: 63.6

Gene sequence:

>750_bases
ATGGCCACCAAACGCATCGGTGACGAGCCGGCCTACGTGTTGCACCGCTACGACTGGAGTGAATCCAGCCTGATTCTGGA
GATATTTACCCGCCAGTATGGACGGGTGGCGCTGGTGGCGCGTGGGGCAAAAAAGCCCAGTTCCAGCTTCCGGCCGATTT
TGCTGCCCTTGCAGCCCTTGCACATTGCCTTCGGCGGCGATGCCGAAATCCGGACCCTGAAAAGCGCGGAGTGGCAAGGC
GGCCACGTCATGCCCACCGGCGATGCCCTGCTGTCGGGTTACTACCTGAATGAGCTGCTGATGCGCCTGCTGGCCCGCGA
TGACCCGCACCCGGTGCTCTTTGACGCCTATTCGGCCACGGTGCAACTGCTGGCCAGCCAGAGCGTGGACACGCTGCAGC
TCGCCCTGCGGGCTTTTGAGCTGCGTTTGCTGCGCGATATTGGCCTGTTGCCCCTGCTGGATGCCGAGACGGCAACGCTG
GCGCCCCTGGAGCCTCAGGCCCGTTATGTGCTGGTGGCGGAGGCCGGCCTCAGGCAGGCCCATGACGACGACCGCAACAG
CCTGCCCGGCGTGCAATGGCAGGCGCTGCAGCAGGCGCTGGGCGACAACGCCCTGTTTTCCGACACGGTGCGGGCCTGCA
TCCCCGGCCTGAATGAACTTAAAACCCAGTTGCGGGCGCTGCTGCACTACCATTGCGGTGTGAAGGTCCTGAAAACCCGG
CAAATGATGATGGACCTGCAGGCCCTTTAA

Upstream 100 bases:

>100_bases
CCTGCGGCCCGGCGAAGCCGGTTCCGCGGCCCCTGCTGGGAGGGGAGAGCTTGCGCCGGTGTGGCGGTGAGCTGTTGGTC
TGCTGCCTGACGCCTTGATC

Downstream 100 bases:

>100_bases
CCGTCAATACCGCCATGCCCCTTTTTCGTCAGTCTGACCACCCACCCGCCCCCACGGGCGTTCACAAGACCGCCCTTTCG
GTCAATATCAACAAAGTCGC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MATKRIGDEPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPLHIAFGGDAEIRTLKSAEWQG
GHVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSATVQLLASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATL
APLEPQARYVLVAEAGLRQAHDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCGVKVLKTR
QMMMDLQAL

Sequences:

>Translated_249_residues
MATKRIGDEPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPLHIAFGGDAEIRTLKSAEWQG
GHVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSATVQLLASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATL
APLEPQARYVLVAEAGLRQAHDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCGVKVLKTR
QMMMDLQAL
>Mature_248_residues
ATKRIGDEPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPLHIAFGGDAEIRTLKSAEWQGG
HVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSATVQLLASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATLA
PLEPQARYVLVAEAGLRQAHDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCGVKVLKTRQ
MMMDLQAL

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

Organism=Escherichia coli, GI2367140, Length=237, Percent_Identity=35.4430379746835, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_POLSJ (Q126K5)

Other databases:

- EMBL:   CP000316
- RefSeq:   YP_550435.1
- ProteinModelPortal:   Q126K5
- STRING:   Q126K5
- GeneID:   4013701
- GenomeReviews:   CP000316_GR
- KEGG:   pol:Bpro_3633
- NMPDR:   fig|296591.1.peg.5138
- eggNOG:   COG1381
- HOGENOM:   HBG645116
- OMA:   DWSESSL
- PhylomeDB:   Q126K5
- ProtClustDB:   CLSK951305
- BioCyc:   PSP296591:BPRO_3633-MONOMER
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 27706; Mature: 27575

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKRIGDEPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPL
CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCEE
HIAFGGDAEIRTLKSAEWQGGHVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSAT
EEEECCCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
VQLLASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATLAPLEPQARYVLVAEAGLRQA
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCCCEEEEECCCCHHC
HDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCGVKVLKTR
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
QMMMDLQAL
HHHHHHHCC
>Mature Secondary Structure 
ATKRIGDEPAYVLHRYDWSESSLILEIFTRQYGRVALVARGAKKPSSSFRPILLPLQPL
CCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCEE
HIAFGGDAEIRTLKSAEWQGGHVMPTGDALLSGYYLNELLMRLLARDDPHPVLFDAYSAT
EEEECCCCCEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
VQLLASQSVDTLQLALRAFELRLLRDIGLLPLLDAETATLAPLEPQARYVLVAEAGLRQA
HHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCCCCEEEEECCCCHHC
HDDDRNSLPGVQWQALQQALGDNALFSDTVRACIPGLNELKTQLRALLHYHCGVKVLKTR
CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
QMMMDLQAL
HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA