| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789470
Identifier: 91789470
GI number: 91789470
Start: 3822275
End: 3822964
Strand: Direct
Name: 91789470
Synonym: Bpro_3619
Alternate gene names: NA
Gene position: 3822275-3822964 (Clockwise)
Preceding gene: 91789469
Following gene: 91789471
Centisome position: 73.5
GC content: 63.04
Gene sequence:
>690_bases GTGCCTAGCTGTAACTTGACGCATGACGCCATGTCCGAAGCCCTGACCCTGACCTCCCTGCCGCTATTTCCACTGGGCAC GGTCCTCTATCCCGGCGGCCTGCTGCCCCTGCGGATTTTTGAAGTCCGCTACCTCGACATGATCGGCAAGTGCCACAAGG CGGGCGCGCCTTTTGGCGTAGTCTCGCTGACCGAGGGCTCGGAGGTACGCCGGCCTGGCCATGCGGAACCCAGCGGGGAC GGCTTTGCCCATGAGGCGTTCAGCACCGTGGGCACCCTGGCCACGATCACCGAATTTGCAGCCCCGCAAGCCGGCTTGAT GGTCATCCGGTGCATCGGGACCCAGCGTTTTACAATTTCCAGCAGCGAAAAAATGAAACATGGCTTGTGGATCGCCAATG TCACGCGCCAGGACGACGATATTGCCGTGAAGATTCCGGAGGACCTGCAGGACACGGCCGACGCGCTTGGCAAGCTGATC CAGACCCTGCAGTCGCGCGGCGTGCCCGCCGGACAAATGCCCGTGCTGGCGCCCTACAGGCTCCAGGACTGCGGCTGGGT GGCCAATCGCTGGTGCGAATTGCTGCCAATCCCGCTGGAACTCAAGCAGCGCCTGATGGAGCTGGACAACCCGCTGCTCA GGCTGGAACTGGTGGGTGACATCCTGGGTCGAACCGGCATCGCCCTCTGA
Upstream 100 bases:
>100_bases CAAGCCTGCACACGCACGCACAAGCACCACGCAATAGCCCGCATCCGGTCAGGCACATCCAGCAGCAGCAAAGTGCGGGG CACGAAGGGCGTGGGATGAT
Downstream 100 bases:
>100_bases CGCCTCCTCCGGCGCTCCGCCTTCTGCGCCGTATTGGGGTATTGGCGTCCAAACCGGGAAATTCCGCCGGTTCCAGACTC CCAACCCGGAAAACAGCCGC
Product: peptidase S16, lon-like protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon; Peptidase S
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPSCNLTHDAMSEALTLTSLPLFPLGTVLYPGGLLPLRIFEVRYLDMIGKCHKAGAPFGVVSLTEGSEVRRPGHAEPSGD GFAHEAFSTVGTLATITEFAAPQAGLMVIRCIGTQRFTISSSEKMKHGLWIANVTRQDDDIAVKIPEDLQDTADALGKLI QTLQSRGVPAGQMPVLAPYRLQDCGWVANRWCELLPIPLELKQRLMELDNPLLRLELVGDILGRTGIAL
Sequences:
>Translated_229_residues MPSCNLTHDAMSEALTLTSLPLFPLGTVLYPGGLLPLRIFEVRYLDMIGKCHKAGAPFGVVSLTEGSEVRRPGHAEPSGD GFAHEAFSTVGTLATITEFAAPQAGLMVIRCIGTQRFTISSSEKMKHGLWIANVTRQDDDIAVKIPEDLQDTADALGKLI QTLQSRGVPAGQMPVLAPYRLQDCGWVANRWCELLPIPLELKQRLMELDNPLLRLELVGDILGRTGIAL >Mature_228_residues PSCNLTHDAMSEALTLTSLPLFPLGTVLYPGGLLPLRIFEVRYLDMIGKCHKAGAPFGVVSLTEGSEVRRPGHAEPSGDG FAHEAFSTVGTLATITEFAAPQAGLMVIRCIGTQRFTISSSEKMKHGLWIANVTRQDDDIAVKIPEDLQDTADALGKLIQ TLQSRGVPAGQMPVLAPYRLQDCGWVANRWCELLPIPLELKQRLMELDNPLLRLELVGDILGRTGIAL
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24884; Mature: 24753
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSCNLTHDAMSEALTLTSLPLFPLGTVLYPGGLLPLRIFEVRYLDMIGKCHKAGAPFGV CCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE VSLTEGSEVRRPGHAEPSGDGFAHEAFSTVGTLATITEFAAPQAGLMVIRCIGTQRFTIS EEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEC SSEKMKHGLWIANVTRQDDDIAVKIPEDLQDTADALGKLIQTLQSRGVPAGQMPVLAPYR CCHHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LQDCGWVANRWCELLPIPLELKQRLMELDNPLLRLELVGDILGRTGIAL CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PSCNLTHDAMSEALTLTSLPLFPLGTVLYPGGLLPLRIFEVRYLDMIGKCHKAGAPFGV CCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE VSLTEGSEVRRPGHAEPSGDGFAHEAFSTVGTLATITEFAAPQAGLMVIRCIGTQRFTIS EEECCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEC SSEKMKHGLWIANVTRQDDDIAVKIPEDLQDTADALGKLIQTLQSRGVPAGQMPVLAPYR CCHHHHCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC LQDCGWVANRWCELLPIPLELKQRLMELDNPLLRLELVGDILGRTGIAL CCHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA