| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pucI [H]
Identifier: 91789432
GI number: 91789432
Start: 3779501
End: 3780961
Strand: Direct
Name: pucI [H]
Synonym: Bpro_3578
Alternate gene names: 91789432
Gene position: 3779501-3780961 (Clockwise)
Preceding gene: 91789431
Following gene: 91789433
Centisome position: 72.68
GC content: 62.7
Gene sequence:
>1461_bases ATGGACATTCGCAACCCATCGCCCGACCTTTACAACGAAGACCTGGCCCCGGCAAAAACGCGGAACTGGGGCACCTTCAG CATCTTCAATGTGTGGACCTCGGACGTGCACAGCCTCTGGGGTTATTACCTGGCAGCCAGCCTGTTCCTGCTGTGCGGCA GTTTCACCAACTTTCTGCTGGCCATCGGCCTGAGCTCGATGGTGATCTTTTTCCTGATGAACCTGGTCGGCTATGCCGGC GTTAAAACCGGCGTTCCCTACCCGGTGCTGGCCCGCGCCTCCTTCGGCGTGTGGGGTGCCAACCTGCCCGCGCTGGTGCG TGCGGTGGTGGCCTGCTTCTGGTACGGCGCACAAACTGCCGCGGCCTCGGGCGCCATCGTGGCCCTGCTCACCCGCTCCG ATGCCATCATGGCGTTTCACAAATCAACGCATATGCTGGGCCATTCGGGCCTGGAGGTGATTTGCTTCGTCGTCGTCTGG GCCTTGCAGCTGCTGATCATCCAGAACGGCATGGAAACCGTGCGCAAGTTCCAGGACTGGGCCGGCCCGGCGGTGTGGGT GGCCATGCTGGTGCTTGCCGTGGGCCTATGCGTCAAGGCCGGCGGCTTCTCGTTTGACCACGGCATTCCGCAGGATGTGC TGCTGGCCAAGACCAAGGATGCCGGCGTCCCCGGCGAGCCCGGCTCGTTCTGGGCACTGATGGCCGTGGGCGCCACCTGG ATCACCTACTTCGCCGCGCTGTACCTGAACTTCTGCGATTTCTCGCGTTATGCCAAAGACAAGGCCACCGTCAAGAAAGG CAACCTCTGGGGCCTGCCGATCAACCTGATCCTGTTCTCGCTGGTGGCTGGCGTAACGACGATTGCCGCCTTCAAGGTGT ATGGCGAGGTGCTGCTGCACCCCGAGCAGATTTCCGCCAAGTTCGACAGCTGGTTCCTGGCGCTGCTGGCCGCGCTGACC TTTGCCGTGGCGACGCTGGGCATCAACGTGGTGGCCAACTTCGTCTCGCCCGCCTTTGACTTTGCCAATGTGTTCCCGCG CAAGATCAGCTTCAAGACCGGCGGCTACATCGCGGCAGGCATCGCGCTGGTGCTCTACCCGTTTGCGCCCTGGGAAGGCA ACGCGGCAACGTTTGTCGGCGCCATCGGCGCCACCATGGGGCCGCTGCTGGGCATCATCCTGGTGGACTACTACCTGATC GCCAAAGGTGAGGTCAACGTGGAAGCGCTCTACCACGAGGACGGCGAATACCGCTACCAGGGCGGCTGGAACCCCAATGC CCTCATCGCCACCTTCATTGGCGCAATGTTCTCCAGCATATTGCCCAACTTCACCAGCCTGCTGCCGTCCTGGTGGGGCA TTTATGGCTGGTTCTTTGGCGTGGCCATTGGCGGCATTGCCTATTACGCGCTGGCCATGGCCATGCCCCGGGCGGCGGCT GCGGCACACGCCAAGGCCTGA
Upstream 100 bases:
>100_bases CTGAGTACAGTCGTGTATACAAAATTGACCGGCCCGCCGATCAGCCGTTTGTAACCCGTCCCCCTGGCCCTGCATTCACC CTCTGCATTGGAGATCACCC
Downstream 100 bases:
>100_bases CACCTCAGCACGGCGGCCTCGGGCGACATCAGCCCACGCATGGCATCTGTATTGCAGGTGGAGACTGGCCGGAATCCCCA TCAGGAGATGCGTGCCGTAA
Product: cytosine/purines, uracil, thiamine, allantoin permease
Products: NA
Alternate protein names: Allantoin transport protein [H]
Number of amino acids: Translated: 486; Mature: 486
Protein sequence:
>486_residues MDIRNPSPDLYNEDLAPAKTRNWGTFSIFNVWTSDVHSLWGYYLAASLFLLCGSFTNFLLAIGLSSMVIFFLMNLVGYAG VKTGVPYPVLARASFGVWGANLPALVRAVVACFWYGAQTAAASGAIVALLTRSDAIMAFHKSTHMLGHSGLEVICFVVVW ALQLLIIQNGMETVRKFQDWAGPAVWVAMLVLAVGLCVKAGGFSFDHGIPQDVLLAKTKDAGVPGEPGSFWALMAVGATW ITYFAALYLNFCDFSRYAKDKATVKKGNLWGLPINLILFSLVAGVTTIAAFKVYGEVLLHPEQISAKFDSWFLALLAALT FAVATLGINVVANFVSPAFDFANVFPRKISFKTGGYIAAGIALVLYPFAPWEGNAATFVGAIGATMGPLLGIILVDYYLI AKGEVNVEALYHEDGEYRYQGGWNPNALIATFIGAMFSSILPNFTSLLPSWWGIYGWFFGVAIGGIAYYALAMAMPRAAA AAHAKA
Sequences:
>Translated_486_residues MDIRNPSPDLYNEDLAPAKTRNWGTFSIFNVWTSDVHSLWGYYLAASLFLLCGSFTNFLLAIGLSSMVIFFLMNLVGYAG VKTGVPYPVLARASFGVWGANLPALVRAVVACFWYGAQTAAASGAIVALLTRSDAIMAFHKSTHMLGHSGLEVICFVVVW ALQLLIIQNGMETVRKFQDWAGPAVWVAMLVLAVGLCVKAGGFSFDHGIPQDVLLAKTKDAGVPGEPGSFWALMAVGATW ITYFAALYLNFCDFSRYAKDKATVKKGNLWGLPINLILFSLVAGVTTIAAFKVYGEVLLHPEQISAKFDSWFLALLAALT FAVATLGINVVANFVSPAFDFANVFPRKISFKTGGYIAAGIALVLYPFAPWEGNAATFVGAIGATMGPLLGIILVDYYLI AKGEVNVEALYHEDGEYRYQGGWNPNALIATFIGAMFSSILPNFTSLLPSWWGIYGWFFGVAIGGIAYYALAMAMPRAAA AAHAKA >Mature_486_residues MDIRNPSPDLYNEDLAPAKTRNWGTFSIFNVWTSDVHSLWGYYLAASLFLLCGSFTNFLLAIGLSSMVIFFLMNLVGYAG VKTGVPYPVLARASFGVWGANLPALVRAVVACFWYGAQTAAASGAIVALLTRSDAIMAFHKSTHMLGHSGLEVICFVVVW ALQLLIIQNGMETVRKFQDWAGPAVWVAMLVLAVGLCVKAGGFSFDHGIPQDVLLAKTKDAGVPGEPGSFWALMAVGATW ITYFAALYLNFCDFSRYAKDKATVKKGNLWGLPINLILFSLVAGVTTIAAFKVYGEVLLHPEQISAKFDSWFLALLAALT FAVATLGINVVANFVSPAFDFANVFPRKISFKTGGYIAAGIALVLYPFAPWEGNAATFVGAIGATMGPLLGIILVDYYLI AKGEVNVEALYHEDGEYRYQGGWNPNALIATFIGAMFSSILPNFTSLLPSWWGIYGWFFGVAIGGIAYYALAMAMPRAAA AAHAKA
Specific function: Transport of allantoin [H]
COG id: COG1953
COG function: function code FH; Cytosine/uracil/thiamine/allantoin permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine-cytosine permease family [H]
Homologues:
Organism=Escherichia coli, GI87081749, Length=485, Percent_Identity=29.2783505154639, Blast_Score=162, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6319495, Length=459, Percent_Identity=23.5294117647059, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6322219, Length=424, Percent_Identity=24.2924528301887, Blast_Score=100, Evalue=9e-22, Organism=Saccharomyces cerevisiae, GI6319429, Length=464, Percent_Identity=23.9224137931034, Blast_Score=96, Evalue=2e-20, Organism=Saccharomyces cerevisiae, GI6323266, Length=445, Percent_Identity=22.0224719101124, Blast_Score=76, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6324645, Length=443, Percent_Identity=22.1218961625282, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324766, Length=439, Percent_Identity=21.4123006833713, Blast_Score=75, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001248 - InterPro: IPR012681 [H]
Pfam domain/function: PF02133 Transp_cyt_pur [H]
EC number: NA
Molecular weight: Translated: 52378; Mature: 52378
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIRNPSPDLYNEDLAPAKTRNWGTFSIFNVWTSDVHSLWGYYLAASLFLLCGSFTNFLL CCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGLSSMVIFFLMNLVGYAGVKTGVPYPVLARASFGVWGANLPALVRAVVACFWYGAQTA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHH AASGAIVALLTRSDAIMAFHKSTHMLGHSGLEVICFVVVWALQLLIIQNGMETVRKFQDW HCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AGPAVWVAMLVLAVGLCVKAGGFSFDHGIPQDVLLAKTKDAGVPGEPGSFWALMAVGATW CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHH ITYFAALYLNFCDFSRYAKDKATVKKGNLWGLPINLILFSLVAGVTTIAAFKVYGEVLLH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEQISAKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPRKISFKTGGYIAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHH IALVLYPFAPWEGNAATFVGAIGATMGPLLGIILVDYYLIAKGEVNVEALYHEDGEYRYQ HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEC GGWNPNALIATFIGAMFSSILPNFTSLLPSWWGIYGWFFGVAIGGIAYYALAMAMPRAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHAKA HHCCCC >Mature Secondary Structure MDIRNPSPDLYNEDLAPAKTRNWGTFSIFNVWTSDVHSLWGYYLAASLFLLCGSFTNFLL CCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIGLSSMVIFFLMNLVGYAGVKTGVPYPVLARASFGVWGANLPALVRAVVACFWYGAQTA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHHH AASGAIVALLTRSDAIMAFHKSTHMLGHSGLEVICFVVVWALQLLIIQNGMETVRKFQDW HCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AGPAVWVAMLVLAVGLCVKAGGFSFDHGIPQDVLLAKTKDAGVPGEPGSFWALMAVGATW CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEECCCCCCCCCCCCHHHHHHHHHHH ITYFAALYLNFCDFSRYAKDKATVKKGNLWGLPINLILFSLVAGVTTIAAFKVYGEVLLH HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEQISAKFDSWFLALLAALTFAVATLGINVVANFVSPAFDFANVFPRKISFKTGGYIAAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHH IALVLYPFAPWEGNAATFVGAIGATMGPLLGIILVDYYLIAKGEVNVEALYHEDGEYRYQ HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEC GGWNPNALIATFIGAMFSSILPNFTSLLPSWWGIYGWFFGVAIGGIAYYALAMAMPRAAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHAKA HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 11344136 [H]