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The map label for this gene is rhmA [H]

Identifier: 91789431

GI number: 91789431

Start: 3778380

End: 3779183

Strand: Direct

Name: rhmA [H]

Synonym: Bpro_3577

Alternate gene names: 91789431

Gene position: 3778380-3779183 (Clockwise)

Preceding gene: 91789430

Following gene: 91789432

Centisome position: 72.66

GC content: 67.29

Gene sequence:

>804_bases
ATGAGCACCGGCAACCCCTTCAAGGCCGCACTGGCCAGTGGCCAACAGCAAATCGGCCTGTGGCTGTCCATGGCCGACCC
CTATCTTGCAGAAGTCAGCGCCACCGCCGGATTCGACTGGCTGCTGATCGACGGCGAGCATGCACCCAATGACCTGCGCA
GCACACTGGCCGCCCTGCAGGCCGTGGCGCCCTACCGTTCCCAGCCGGTCGTGCGGGCGGTAGCCGGCGACGTGCCGCTG
ATCAAGCAGCTGCTGGACATTGGCGCGCAAAACCTGCTGGTACCCATGGTCGACACAGCCGCTCAGGCCCAGGCCATCGT
GGACGCGACGCGCTACCCGCCTCGGGGCATCCGGGGCGTAGGCAGTGCGGTGGGACGCGCTTCACGCTGGAGCGCGCGCA
CCGACTACCTCGACCACGCCGACAGCGAGGTCTGCCTGCTGGTGCAGGCGGAAACCGTCACGGCGCTGAAAAACCTGGAA
GCAATTTGCGCGACAGATGGTGTGGATGGGGTGTTCATTGGCCCCGCCGATCTGGCGGCGTCCATGGGGCACCGCGGCAA
ACCGGGCCACCCCGAAGTGCAGGCGGCCATCGAGCAGGCCATGAAAACCATCATCGCCTCCGGCAAGGCAGCGGGCTCGC
TGACCTCGGACCCGGCGCTGGCACGGCACTACCTGGCCCTGGGCTGCACCTTTGTGGCCACCGGCGTCGATGTGCTGGTC
TATGCCAATGCGGTTCGGCGCATGGCGGCTGATTTCATCTCGCCCGGCGCCGGACAAGCGGTCATCCCGAGCGCAGCCTA
CTGA

Upstream 100 bases:

>100_bases
GATCGCGTCGCGGCCTCAGGATGTCCGATAGACGATGATCCCAGCCGCGCGGCCCGCACTCCGTCAATGACCGTCAACGA
CCATTTCAAAGGATGAACTC

Downstream 100 bases:

>100_bases
CCGGCAAGGCTGCTCCTCGGCATTAACGGCCGGGAAGGCCAACAAGACCGATAACGCCGGTAAGACTGGGCACGCCGGCA
TTGCCCTGAAGGCTCACCAA

Product: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

Products: NA

Alternate protein names: KDR aldolase; 2-dehydro-3-deoxyrhamnonate aldolase [H]

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MSTGNPFKAALASGQQQIGLWLSMADPYLAEVSATAGFDWLLIDGEHAPNDLRSTLAALQAVAPYRSQPVVRAVAGDVPL
IKQLLDIGAQNLLVPMVDTAAQAQAIVDATRYPPRGIRGVGSAVGRASRWSARTDYLDHADSEVCLLVQAETVTALKNLE
AICATDGVDGVFIGPADLAASMGHRGKPGHPEVQAAIEQAMKTIIASGKAAGSLTSDPALARHYLALGCTFVATGVDVLV
YANAVRRMAADFISPGAGQAVIPSAAY

Sequences:

>Translated_267_residues
MSTGNPFKAALASGQQQIGLWLSMADPYLAEVSATAGFDWLLIDGEHAPNDLRSTLAALQAVAPYRSQPVVRAVAGDVPL
IKQLLDIGAQNLLVPMVDTAAQAQAIVDATRYPPRGIRGVGSAVGRASRWSARTDYLDHADSEVCLLVQAETVTALKNLE
AICATDGVDGVFIGPADLAASMGHRGKPGHPEVQAAIEQAMKTIIASGKAAGSLTSDPALARHYLALGCTFVATGVDVLV
YANAVRRMAADFISPGAGQAVIPSAAY
>Mature_266_residues
STGNPFKAALASGQQQIGLWLSMADPYLAEVSATAGFDWLLIDGEHAPNDLRSTLAALQAVAPYRSQPVVRAVAGDVPLI
KQLLDIGAQNLLVPMVDTAAQAQAIVDATRYPPRGIRGVGSAVGRASRWSARTDYLDHADSEVCLLVQAETVTALKNLEA
ICATDGVDGVFIGPADLAASMGHRGKPGHPEVQAAIEQAMKTIIASGKAAGSLTSDPALARHYLALGCTFVATGVDVLVY
ANAVRRMAADFISPGAGQAVIPSAAY

Specific function: Catalyzes the reversible retro-aldol cleavage of 2-keto- 3-deoxy-L-rhamnonate (KDR) to pyruvate and lactaldehyde [H]

COG id: COG3836

COG function: function code G; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. KDR aldolase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788578, Length=254, Percent_Identity=56.2992125984252, Blast_Score=291, Evalue=3e-80,
Organism=Escherichia coli, GI1789514, Length=248, Percent_Identity=46.3709677419355, Blast_Score=226, Evalue=1e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: 4.1.2.-

Molecular weight: Translated: 27673; Mature: 27542

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGNPFKAALASGQQQIGLWLSMADPYLAEVSATAGFDWLLIDGEHAPNDLRSTLAALQ
CCCCCHHHHHHHCCCHHHEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
AVAPYRSQPVVRAVAGDVPLIKQLLDIGAQNLLVPMVDTAAQAQAIVDATRYPPRGIRGV
HHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
GSAVGRASRWSARTDYLDHADSEVCLLVQAETVTALKNLEAICATDGVDGVFIGPADLAA
HHHHCCCHHCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
SMGHRGKPGHPEVQAAIEQAMKTIIASGKAAGSLTSDPALARHYLALGCTFVATGVDVLV
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YANAVRRMAADFISPGAGQAVIPSAAY
HHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
STGNPFKAALASGQQQIGLWLSMADPYLAEVSATAGFDWLLIDGEHAPNDLRSTLAALQ
CCCCHHHHHHHCCCHHHEEEEECCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH
AVAPYRSQPVVRAVAGDVPLIKQLLDIGAQNLLVPMVDTAAQAQAIVDATRYPPRGIRGV
HHCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHH
GSAVGRASRWSARTDYLDHADSEVCLLVQAETVTALKNLEAICATDGVDGVFIGPADLAA
HHHHCCCHHCCHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
SMGHRGKPGHPEVQAAIEQAMKTIIASGKAAGSLTSDPALARHYLALGCTFVATGVDVLV
HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YANAVRRMAADFISPGAGQAVIPSAAY
HHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA