| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789416
Identifier: 91789416
GI number: 91789416
Start: 3761803
End: 3762546
Strand: Reverse
Name: 91789416
Synonym: Bpro_3562
Alternate gene names: NA
Gene position: 3762546-3761803 (Counterclockwise)
Preceding gene: 91789417
Following gene: 91789415
Centisome position: 72.35
GC content: 59.81
Gene sequence:
>744_bases GTGAAAATTTCCACAGTGCCACCAGAAAAAAAATTACCCCATCCGGACAGCAGCGAATCGTACGTGGCGAAAAGCGCCGG GGCGCGCATTACTTTGTTCGACCTGGATCACACACTGATCCCGATCGATTCGGATTACGAATGGGGCGAGTTCACCATTG CGCAAGGCTGGTGCGAAGCCACCGAGTTCAAGCGCCGCAACGCTGAATTCTTTGCACAATACCGCGCCGGCACGCTCGAC ATCCACGCCTATGTGCGCTTTGCCACACGGGCCATCCGCGAACAGGGTGTTACTAAATCAGTAGCTGCCCACGCCAGTTT CATGCGGGATGTCGTTCAGAAGATCATTACGCCGCAAGCCCAGGCGCTGGTTCAGCAGCACCGCGAGGCCGGTGACGAGC TGGTGATCGTGACGGCCACCAATGAGTTCGTGACCCGCCCGATTGCCGAGGCTTTTGGGGTGAAGGAACTGATCGCGGTT GAACTGGCGCGTGACGCCCAGGGCCAGCTGACCGGTGAAATCAAGGGCACCCCCTCCTTCCGGGAAGGCAAGGTTGCCCG CGTGGAGCAATGGCTGGCTGCCCGCGAACTGGGCTGGCACGATGTGCACACCTGCTTTTACACCGATTCCCTCAACGATC TGGCGCTGCTGGAGAAGGTGAGCTGCCCGGTGGCCACCAATCCGGATGAACGCCTGCGGGCCATCGCCACCGAGCGCGGA TGGCGCATACTTGACCTGTTCTAA
Upstream 100 bases:
>100_bases GCGGCCCTGACTGGCGCAAACGGGCGCTGGAGGGTCTGATTGCCCTGCAGCGGGTGCATCCCGAGCTCAAGTTGGGAGAG ATGTTGACAGGAGTCGTGAC
Downstream 100 bases:
>100_bases TTGGCAAGGGCGGCGCCAGCCGCCCCGCAACGACGGGTTCCCCCGAAAAATTCTGTTTTCATGATCAAAAAATTCATCGA CAAGCTGTTTGGCAAATCCG
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKISTVPPEKKLPHPDSSESYVAKSAGARITLFDLDHTLIPIDSDYEWGEFTIAQGWCEATEFKRRNAEFFAQYRAGTLD IHAYVRFATRAIREQGVTKSVAAHASFMRDVVQKIITPQAQALVQQHREAGDELVIVTATNEFVTRPIAEAFGVKELIAV ELARDAQGQLTGEIKGTPSFREGKVARVEQWLAARELGWHDVHTCFYTDSLNDLALLEKVSCPVATNPDERLRAIATERG WRILDLF
Sequences:
>Translated_247_residues MKISTVPPEKKLPHPDSSESYVAKSAGARITLFDLDHTLIPIDSDYEWGEFTIAQGWCEATEFKRRNAEFFAQYRAGTLD IHAYVRFATRAIREQGVTKSVAAHASFMRDVVQKIITPQAQALVQQHREAGDELVIVTATNEFVTRPIAEAFGVKELIAV ELARDAQGQLTGEIKGTPSFREGKVARVEQWLAARELGWHDVHTCFYTDSLNDLALLEKVSCPVATNPDERLRAIATERG WRILDLF >Mature_247_residues MKISTVPPEKKLPHPDSSESYVAKSAGARITLFDLDHTLIPIDSDYEWGEFTIAQGWCEATEFKRRNAEFFAQYRAGTLD IHAYVRFATRAIREQGVTKSVAAHASFMRDVVQKIITPQAQALVQQHREAGDELVIVTATNEFVTRPIAEAFGVKELIAV ELARDAQGQLTGEIKGTPSFREGKVARVEQWLAARELGWHDVHTCFYTDSLNDLALLEKVSCPVATNPDERLRAIATERG WRILDLF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27728; Mature: 27728
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISTVPPEKKLPHPDSSESYVAKSAGARITLFDLDHTLIPIDSDYEWGEFTIAQGWCEA CCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCEEEECCCCCCCCEEEEEHHHHHH TEFKRRNAEFFAQYRAGTLDIHAYVRFATRAIREQGVTKSVAAHASFMRDVVQKIITPQA HHHHHHCHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHH QALVQQHREAGDELVIVTATNEFVTRPIAEAFGVKELIAVELARDAQGQLTGEIKGTPSF HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCCC REGKVARVEQWLAARELGWHDVHTCFYTDSLNDLALLEKVSCPVATNPDERLRAIATERG CCCCHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC WRILDLF CEEEEEC >Mature Secondary Structure MKISTVPPEKKLPHPDSSESYVAKSAGARITLFDLDHTLIPIDSDYEWGEFTIAQGWCEA CCCCCCCCCCCCCCCCCCCCHHHHCCCCEEEEEECCCEEEECCCCCCCCEEEEEHHHHHH TEFKRRNAEFFAQYRAGTLDIHAYVRFATRAIREQGVTKSVAAHASFMRDVVQKIITPQA HHHHHHCHHHHHHHCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHH QALVQQHREAGDELVIVTATNEFVTRPIAEAFGVKELIAVELARDAQGQLTGEIKGTPSF HHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEECCCCCC REGKVARVEQWLAARELGWHDVHTCFYTDSLNDLALLEKVSCPVATNPDERLRAIATERG CCCCHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCC WRILDLF CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA