| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789417
Identifier: 91789417
GI number: 91789417
Start: 3762543
End: 3763604
Strand: Reverse
Name: 91789417
Synonym: Bpro_3563
Alternate gene names: NA
Gene position: 3763604-3762543 (Counterclockwise)
Preceding gene: 91789418
Following gene: 91789416
Centisome position: 72.37
GC content: 62.62
Gene sequence:
>1062_bases ATGCTCCTGCATGCTGAACTTCCCCTTTCTGCCCAGACGGCTTATGCCCAACTGGCGGACGTGGCGACTTCGCTGGAGCT AAACCGCAGCATCGAAAACCTGCATGGCAGTTTTTCGCGCAAGACGGTGCAGGGTGCGGTGTACTGGTATTTTTCCTATC GCGACCTGAACGGACAATTGCGCCAGCTCTATGTCGGGCCCGACACCGATGCCGTCCGCACGGCGGTCGAGCGCGCCCGG AACCCCACCATCAAACCGGACGCGGCCCTGTCGCCGCTAGCCAAGGCCGCAGTGGCTCTCGGGTGCGCCCCGGCCCTGCC CAAGCATGTACGCGCGGTCCGTCGCCTGTCCGACTATGGTTTTTTTCGCGCCGGCGGGGTGTTGGTCGGCACGCACGCTT TCATCGCTCTTGGCAACATGCTGGGCGTCAAATGGTTTGCTGGCGGGGCGACTACCGACGTGGATTTCGCGCACGCCGGC AAGAATATCTCGGTCGCGCTGCCGGCGAATGTGCAGATTGACGTGCATGCCGCGCTCACGAGCTTTGAACAGGGCTTCAT ACCGCTGGTCCAGCTCAGTGGAGGTGCGGGTGCTTCCTACAAGCTCAGCGGGGATCCGGAATTCCAGATCGATTTCCTGA CTTCGGCTCACCGGGGTGGCGACGGGCCTATCGTCATACCGAACCTCAATGTCGGCCTGCAGCCGTTGCGTTTCATGGAG TTTTCCCTCGAAAGAGTGACGCAGGCGGTGCTGGTTGACCGCAACGGCGGCGCCGTGACGGTGAGTATTCCCGCGCCGGA ACGTTACGCGGTGCACAAGCTGCTGATCGTGGGTGAGCGGTCGGGGGCCATGCGGACCAAGGCCAACAAAGACTTGCAGC AGGCAGCGGCCTTGTTTGATTACCTGCTGGCGACGCAGCCGGAAAGTCTGCATGATGCCTGGCGCGACGCGCTGGATCGC GGCCCTGACTGGCGCAAACGGGCGCTGGAGGGTCTGATTGCCCTGCAGCGGGTGCATCCCGAGCTCAAGTTGGGAGAGAT GTTGACAGGAGTCGTGACGTGA
Upstream 100 bases:
>100_bases ATCACGATCCCGCTGATCAAATCCATGCTGGAAAACGGATAAGTACTCGGATAAGTATTGCTCTATACAACAAATATTAA TTTGTTGTATAGTTCGGGCC
Downstream 100 bases:
>100_bases AAATTTCCACAGTGCCACCAGAAAAAAAATTACCCCATCCGGACAGCAGCGAATCGTACGTGGCGAAAAGCGCCGGGGCG CGCATTACTTTGTTCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MLLHAELPLSAQTAYAQLADVATSLELNRSIENLHGSFSRKTVQGAVYWYFSYRDLNGQLRQLYVGPDTDAVRTAVERAR NPTIKPDAALSPLAKAAVALGCAPALPKHVRAVRRLSDYGFFRAGGVLVGTHAFIALGNMLGVKWFAGGATTDVDFAHAG KNISVALPANVQIDVHAALTSFEQGFIPLVQLSGGAGASYKLSGDPEFQIDFLTSAHRGGDGPIVIPNLNVGLQPLRFME FSLERVTQAVLVDRNGGAVTVSIPAPERYAVHKLLIVGERSGAMRTKANKDLQQAAALFDYLLATQPESLHDAWRDALDR GPDWRKRALEGLIALQRVHPELKLGEMLTGVVT
Sequences:
>Translated_353_residues MLLHAELPLSAQTAYAQLADVATSLELNRSIENLHGSFSRKTVQGAVYWYFSYRDLNGQLRQLYVGPDTDAVRTAVERAR NPTIKPDAALSPLAKAAVALGCAPALPKHVRAVRRLSDYGFFRAGGVLVGTHAFIALGNMLGVKWFAGGATTDVDFAHAG KNISVALPANVQIDVHAALTSFEQGFIPLVQLSGGAGASYKLSGDPEFQIDFLTSAHRGGDGPIVIPNLNVGLQPLRFME FSLERVTQAVLVDRNGGAVTVSIPAPERYAVHKLLIVGERSGAMRTKANKDLQQAAALFDYLLATQPESLHDAWRDALDR GPDWRKRALEGLIALQRVHPELKLGEMLTGVVT >Mature_353_residues MLLHAELPLSAQTAYAQLADVATSLELNRSIENLHGSFSRKTVQGAVYWYFSYRDLNGQLRQLYVGPDTDAVRTAVERAR NPTIKPDAALSPLAKAAVALGCAPALPKHVRAVRRLSDYGFFRAGGVLVGTHAFIALGNMLGVKWFAGGATTDVDFAHAG KNISVALPANVQIDVHAALTSFEQGFIPLVQLSGGAGASYKLSGDPEFQIDFLTSAHRGGDGPIVIPNLNVGLQPLRFME FSLERVTQAVLVDRNGGAVTVSIPAPERYAVHKLLIVGERSGAMRTKANKDLQQAAALFDYLLATQPESLHDAWRDALDR GPDWRKRALEGLIALQRVHPELKLGEMLTGVVT
Specific function: Unknown
COG id: COG5397
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38080; Mature: 38080
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLHAELPLSAQTAYAQLADVATSLELNRSIENLHGSFSRKTVQGAVYWYFSYRDLNGQL CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEEEEEEECCCCEE RQLYVGPDTDAVRTAVERARNPTIKPDAALSPLAKAAVALGCAPALPKHVRAVRRLSDYG EEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC FFRAGGVLVGTHAFIALGNMLGVKWFAGGATTDVDFAHAGKNISVALPANVQIDVHAALT CEEECCEEEEHHHHHHHHHHHCEEEECCCCCCCCHHHHCCCEEEEEECCCEEEEEHHHHH SFEQGFIPLVQLSGGAGASYKLSGDPEFQIDFLTSAHRGGDGPIVIPNLNVGLQPLRFME HHCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHH FSLERVTQAVLVDRNGGAVTVSIPAPERYAVHKLLIVGERSGAMRTKANKDLQQAAALFD HHHHHHHHHHEEECCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHH YLLATQPESLHDAWRDALDRGPDWRKRALEGLIALQRVHPELKLGEMLTGVVT HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MLLHAELPLSAQTAYAQLADVATSLELNRSIENLHGSFSRKTVQGAVYWYFSYRDLNGQL CEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEEEEEEECCCCEE RQLYVGPDTDAVRTAVERARNPTIKPDAALSPLAKAAVALGCAPALPKHVRAVRRLSDYG EEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC FFRAGGVLVGTHAFIALGNMLGVKWFAGGATTDVDFAHAGKNISVALPANVQIDVHAALT CEEECCEEEEHHHHHHHHHHHCEEEECCCCCCCCHHHHCCCEEEEEECCCEEEEEHHHHH SFEQGFIPLVQLSGGAGASYKLSGDPEFQIDFLTSAHRGGDGPIVIPNLNVGLQPLRFME HHCCCCEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHHHHH FSLERVTQAVLVDRNGGAVTVSIPAPERYAVHKLLIVGERSGAMRTKANKDLQQAAALFD HHHHHHHHHHEEECCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHH YLLATQPESLHDAWRDALDRGPDWRKRALEGLIALQRVHPELKLGEMLTGVVT HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA