| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iorB [H]
Identifier: 91789410
GI number: 91789410
Start: 3755309
End: 3757594
Strand: Reverse
Name: iorB [H]
Synonym: Bpro_3556
Alternate gene names: 91789410
Gene position: 3757594-3755309 (Counterclockwise)
Preceding gene: 91789411
Following gene: 91789409
Centisome position: 72.26
GC content: 66.05
Gene sequence:
>2286_bases ATGTATTCCAACTCAACAGACACCCTGGACATCACCGGGCAATTGCCAAAAGGCCTGCAGGCCCTGATGCACAAAGCACA AGAGGGTACTGAAATTGGAGCCATGGCGGCACTGCCGCGTCGCAGCTTCCTCAAGGTCGCCACGGCCAGCGGTTTTGCGC TGGGGGTTTTTCCGCTGCTGACGCATGCACAGGCAACGGCGTCCACAACCGCAGCATCCAGCCTCAAGCCGACCCAGCAG CCTTCGGCCTTTGTACGCATCGACCGGGACGGCACGGTGACCGTCACCATCAACCGGCTGGAGTTCGGGCAGGGCGTGCA AACCGGTTTGCCCATGATCCTGGCCGAGGAACTCGATGCGGACTGGCGCCTGGTGAAGAGTCAGCACGGCAATGCCGACC CCGCCTATGTGGACCCGGCATTCGGCATGCACCTCACGGGCGGATCGGGCTCGATCAAGAACTCCTACACGCAGTACCGC GAACTCGGCGCCCGCACCCGGGCCATGCTGGTCTCGGCGGCCGCCGCGCAATGGGGCGTCGATGCAGGCAGCCTGCGTAC TCAGCAGGGCGTGGTGGTAGGCCCTGGCGGCAAGCGCCTGACATACGGTGAACTGGCCGAAGCGGCCATGAAGCTGCCGG TGCCGGAGGCGGTCACGCTCAAGGACCCCAAACAGTTCCGCATCATTGGCAAGCCCACGGGCCGCCTGGACGCGCGCGCC AAATCCAGTGGCGGTCAAAGCTACGGCATCGACGTGCGCCTGCCCGGCATGCTGACGGCGGTGGTCGCGCATCCGCCGGT ATTTGCCGGCAAGGTCAAATCGCTGGATGACGCGGCGGCTCGAGCCATCCCCGGCGTGAAGGCCGTGCTGCGTGTGCCGC TCGATCGCGGGGGGGAGGGCGTGGCGGTGGTGGCGGAAGGCTACTGGGCCGCCAAGCGAGGCCGAGATGCGCTCAAGGTC GACTGGGACACCAGCGGCATCGAAAAAGTGGACAGCGCGCAGCAACTCACCAGCTATCGCGCGCTGGCGCAGAAAACCGG CACGCTCAAATACGACGCCGACGTCAGCAAGCTGGCCGCGGCACCCAAGAAAATCAGCGCCGAATTCGTGTTCCCTTACC TGGCCCATGCACCCATGGAGCCGCTGAACTGCACGGTGCAGCTCAGCGGGCAGGGCGCAGACGCACGCGCTGAACTCTGG CTGGGCACGCAGATGCCGGGGTTGGACGCCATGGCGGCGTCCAAGGTGCTGGGTGTGGCGCCGCAAAACGTCAAGATGAA TGTGCAGATGGCCGGTGGCGGCTTCGGCCGCCGCGCCATTGCGAGCAGTGACTACGTGGTCGAAGCCTGCAACGTCGCGA AGGCCGCGCGCGGCGCCGGGCTGACGGCCGCGGTGCGCACCCTGTGGAGCCGCGAGGACGACATCAAGGGCGGTTACTAC CGCCCCATGCATGTGCACCGCGCCGAGATTGGTTTCGACGCGAAGGGCGAGATCCTGGCCTGGGACCACGTGATCGTCGG CCAGTCCATTGTGGGGGGCACGCCTTTTGAAGGCTTCATGGTCAAGGACGGTGTGGACGGCACCATGGTGGAGGGCATGA AGGAGCCCTACGAGATTCCGATGCGGCTGTCGGTGCACCACCCCAAGCTGAACGTGCCGGTGCTGTGGTGGCGCAGTGTA GGTTCCACCCATACCGCTTATGTGATGGAAACATTGATTGACGAGATCGCCCGCGGCACGGGCCAGGATCCGGTGGCCTA CCGCCTCAGGCAGTTCGGCACGAAACACCCGCGCCACACCGCCGCGCTGCAGCTGGCAGTGAGCAAGTCCGGCTACGGCA AACGTACGCTGACCGCCGGACGTGCCTGGGGCGTGGCGGTCCACGAGTCCTTCAACACCGTGGTGGCCTACGTGGTCGAA GCCTCCGTCAAGGACAACACGCCGGTGCTGCACAGCGTCACCGCCGGGGTGCACTGCAATCTTGCCATCAACCCGACCAG CATCGAAGCTCAGATTCAGGGCGGGGCGCTGATGGGTCTGTCGATGTGCCTGCCGGGCGCTGCCATCACCTTGAAGGACG GCGTGGTCGAGCAGAGCAACTTTGGCGACTTCCCGGTGCCGCGTATCACCGATATGCCCGCGGTGGCGGTGTTTATCGTG CCCAGCGCCGATGCGCCCACGGGCCTGGGTGAGCCGGGCCTGCCGCCGCTGGCCCCGGCATTTGCCAACGCGGTCGCGCG CCTCACGGGCAAGGCGCCGCGCGAGCTGCCCTTCAAGCTGGCGTGA
Upstream 100 bases:
>100_bases ACGCCGCCATGGCCGGCAACATCTGCCGCTGCGGCACCTATGTGCGCATTCGCGCCGCCATCAAAGACGCCGCCCTGGCC CTGGCCTGAAGGAGAACACC
Downstream 100 bases:
>100_bases TGGACGGCACCGGACCCACCGTGCTGGTGCTGGCTTCGGGCCGGGGCGAGCGCTTCATCGCGTCCGGCGGCAGCACGCAC AAGCTGCAGGCGCTGCTGGC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 761; Mature: 761
Protein sequence:
>761_residues MYSNSTDTLDITGQLPKGLQALMHKAQEGTEIGAMAALPRRSFLKVATASGFALGVFPLLTHAQATASTTAASSLKPTQQ PSAFVRIDRDGTVTVTINRLEFGQGVQTGLPMILAEELDADWRLVKSQHGNADPAYVDPAFGMHLTGGSGSIKNSYTQYR ELGARTRAMLVSAAAAQWGVDAGSLRTQQGVVVGPGGKRLTYGELAEAAMKLPVPEAVTLKDPKQFRIIGKPTGRLDARA KSSGGQSYGIDVRLPGMLTAVVAHPPVFAGKVKSLDDAAARAIPGVKAVLRVPLDRGGEGVAVVAEGYWAAKRGRDALKV DWDTSGIEKVDSAQQLTSYRALAQKTGTLKYDADVSKLAAAPKKISAEFVFPYLAHAPMEPLNCTVQLSGQGADARAELW LGTQMPGLDAMAASKVLGVAPQNVKMNVQMAGGGFGRRAIASSDYVVEACNVAKAARGAGLTAAVRTLWSREDDIKGGYY RPMHVHRAEIGFDAKGEILAWDHVIVGQSIVGGTPFEGFMVKDGVDGTMVEGMKEPYEIPMRLSVHHPKLNVPVLWWRSV GSTHTAYVMETLIDEIARGTGQDPVAYRLRQFGTKHPRHTAALQLAVSKSGYGKRTLTAGRAWGVAVHESFNTVVAYVVE ASVKDNTPVLHSVTAGVHCNLAINPTSIEAQIQGGALMGLSMCLPGAAITLKDGVVEQSNFGDFPVPRITDMPAVAVFIV PSADAPTGLGEPGLPPLAPAFANAVARLTGKAPRELPFKLA
Sequences:
>Translated_761_residues MYSNSTDTLDITGQLPKGLQALMHKAQEGTEIGAMAALPRRSFLKVATASGFALGVFPLLTHAQATASTTAASSLKPTQQ PSAFVRIDRDGTVTVTINRLEFGQGVQTGLPMILAEELDADWRLVKSQHGNADPAYVDPAFGMHLTGGSGSIKNSYTQYR ELGARTRAMLVSAAAAQWGVDAGSLRTQQGVVVGPGGKRLTYGELAEAAMKLPVPEAVTLKDPKQFRIIGKPTGRLDARA KSSGGQSYGIDVRLPGMLTAVVAHPPVFAGKVKSLDDAAARAIPGVKAVLRVPLDRGGEGVAVVAEGYWAAKRGRDALKV DWDTSGIEKVDSAQQLTSYRALAQKTGTLKYDADVSKLAAAPKKISAEFVFPYLAHAPMEPLNCTVQLSGQGADARAELW LGTQMPGLDAMAASKVLGVAPQNVKMNVQMAGGGFGRRAIASSDYVVEACNVAKAARGAGLTAAVRTLWSREDDIKGGYY RPMHVHRAEIGFDAKGEILAWDHVIVGQSIVGGTPFEGFMVKDGVDGTMVEGMKEPYEIPMRLSVHHPKLNVPVLWWRSV GSTHTAYVMETLIDEIARGTGQDPVAYRLRQFGTKHPRHTAALQLAVSKSGYGKRTLTAGRAWGVAVHESFNTVVAYVVE ASVKDNTPVLHSVTAGVHCNLAINPTSIEAQIQGGALMGLSMCLPGAAITLKDGVVEQSNFGDFPVPRITDMPAVAVFIV PSADAPTGLGEPGLPPLAPAFANAVARLTGKAPRELPFKLA >Mature_761_residues MYSNSTDTLDITGQLPKGLQALMHKAQEGTEIGAMAALPRRSFLKVATASGFALGVFPLLTHAQATASTTAASSLKPTQQ PSAFVRIDRDGTVTVTINRLEFGQGVQTGLPMILAEELDADWRLVKSQHGNADPAYVDPAFGMHLTGGSGSIKNSYTQYR ELGARTRAMLVSAAAAQWGVDAGSLRTQQGVVVGPGGKRLTYGELAEAAMKLPVPEAVTLKDPKQFRIIGKPTGRLDARA KSSGGQSYGIDVRLPGMLTAVVAHPPVFAGKVKSLDDAAARAIPGVKAVLRVPLDRGGEGVAVVAEGYWAAKRGRDALKV DWDTSGIEKVDSAQQLTSYRALAQKTGTLKYDADVSKLAAAPKKISAEFVFPYLAHAPMEPLNCTVQLSGQGADARAELW LGTQMPGLDAMAASKVLGVAPQNVKMNVQMAGGGFGRRAIASSDYVVEACNVAKAARGAGLTAAVRTLWSREDDIKGGYY RPMHVHRAEIGFDAKGEILAWDHVIVGQSIVGGTPFEGFMVKDGVDGTMVEGMKEPYEIPMRLSVHHPKLNVPVLWWRSV GSTHTAYVMETLIDEIARGTGQDPVAYRLRQFGTKHPRHTAALQLAVSKSGYGKRTLTAGRAWGVAVHESFNTVVAYVVE ASVKDNTPVLHSVTAGVHCNLAINPTSIEAQIQGGALMGLSMCLPGAAITLKDGVVEQSNFGDFPVPRITDMPAVAVFIV PSADAPTGLGEPGLPPLAPAFANAVARLTGKAPRELPFKLA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012368 - InterPro: IPR006311 [H]
Pfam domain/function: PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 80429; Mature: 80429
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNSTDTLDITGQLPKGLQALMHKAQEGTEIGAMAALPRRSFLKVATASGFALGVFPLL CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHEEECCCCCHHHHHHHH THAQATASTTAASSLKPTQQPSAFVRIDRDGTVTVTINRLEFGQGVQTGLPMILAEELDA HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHCCCEEEHHHCCC DWRLVKSQHGNADPAYVDPAFGMHLTGGSGSIKNSYTQYRELGARTRAMLVSAAAAQWGV CCEEHHHCCCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DAGSLRTQQGVVVGPGGKRLTYGELAEAAMKLPVPEAVTLKDPKQFRIIGKPTGRLDARA CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCC KSSGGQSYGIDVRLPGMLTAVVAHPPVFAGKVKSLDDAAARAIPGVKAVLRVPLDRGGEG CCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEHCCCCCCCCCE VAVVAEGYWAAKRGRDALKVDWDTSGIEKVDSAQQLTSYRALAQKTGTLKYDADVSKLAA EEEEECCEEHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHC APKKISAEFVFPYLAHAPMEPLNCTVQLSGQGADARAELWLGTQMPGLDAMAASKVLGVA CCHHCCHHEECHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC PQNVKMNVQMAGGGFGRRAIASSDYVVEACNVAKAARGAGLTAAVRTLWSREDDIKGGYY CCCEEEEEEECCCCCCCHHCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEE RPMHVHRAEIGFDAKGEILAWDHVIVGQSIVGGTPFEGFMVKDGVDGTMVEGMKEPYEIP CCEEEEEEECCCCCCCCEEEECEEEECCHHCCCCCCCCEEEECCCCCHHHHCCCCCCCCC MRLSVHHPKLNVPVLWWRSVGSTHTAYVMETLIDEIARGTGQDPVAYRLRQFGTKHPRHT EEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCE AALQLAVSKSGYGKRTLTAGRAWGVAVHESFNTVVAYVVEASVKDNTPVLHSVTAGVHCN EEEEEEECCCCCCCEEEECCCEEEEEEHHHHHHEEEEEEECCCCCCCCEEEEEECCEEEE LAINPTSIEAQIQGGALMGLSMCLPGAAITLKDGVVEQSNFGDFPVPRITDMPAVAVFIV EEECCCCEEEEECCCEEEEHHHHCCCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEE PSADAPTGLGEPGLPPLAPAFANAVARLTGKAPRELPFKLA ECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MYSNSTDTLDITGQLPKGLQALMHKAQEGTEIGAMAALPRRSFLKVATASGFALGVFPLL CCCCCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHEEECCCCCHHHHHHHH THAQATASTTAASSLKPTQQPSAFVRIDRDGTVTVTINRLEFGQGVQTGLPMILAEELDA HHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEEEECCCCHHHCCCEEEHHHCCC DWRLVKSQHGNADPAYVDPAFGMHLTGGSGSIKNSYTQYRELGARTRAMLVSAAAAQWGV CCEEHHHCCCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC DAGSLRTQQGVVVGPGGKRLTYGELAEAAMKLPVPEAVTLKDPKQFRIIGKPTGRLDARA CCCCCCCCCCEEECCCCCCCCHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCC KSSGGQSYGIDVRLPGMLTAVVAHPPVFAGKVKSLDDAAARAIPGVKAVLRVPLDRGGEG CCCCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCEEHCCCCCCCCCE VAVVAEGYWAAKRGRDALKVDWDTSGIEKVDSAQQLTSYRALAQKTGTLKYDADVSKLAA EEEEECCEEHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHC APKKISAEFVFPYLAHAPMEPLNCTVQLSGQGADARAELWLGTQMPGLDAMAASKVLGVA CCHHCCHHEECHHHHCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCC PQNVKMNVQMAGGGFGRRAIASSDYVVEACNVAKAARGAGLTAAVRTLWSREDDIKGGYY CCCEEEEEEECCCCCCCHHCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCEE RPMHVHRAEIGFDAKGEILAWDHVIVGQSIVGGTPFEGFMVKDGVDGTMVEGMKEPYEIP CCEEEEEEECCCCCCCCEEEECEEEECCHHCCCCCCCCEEEECCCCCHHHHCCCCCCCCC MRLSVHHPKLNVPVLWWRSVGSTHTAYVMETLIDEIARGTGQDPVAYRLRQFGTKHPRHT EEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCE AALQLAVSKSGYGKRTLTAGRAWGVAVHESFNTVVAYVVEASVKDNTPVLHSVTAGVHCN EEEEEEECCCCCCCEEEECCCEEEEEEHHHHHHEEEEEEECCCCCCCCEEEEEECCEEEE LAINPTSIEAQIQGGALMGLSMCLPGAAITLKDGVVEQSNFGDFPVPRITDMPAVAVFIV EEECCCCEEEEECCCEEEEHHHHCCCCEEEEECCCEECCCCCCCCCCCCCCCCEEEEEEE PSADAPTGLGEPGLPPLAPAFANAVARLTGKAPRELPFKLA ECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]