| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is iorA [H]
Identifier: 91789411
GI number: 91789411
Start: 3757606
End: 3758064
Strand: Reverse
Name: iorA [H]
Synonym: Bpro_3557
Alternate gene names: 91789411
Gene position: 3758064-3757606 (Counterclockwise)
Preceding gene: 91789412
Following gene: 91789410
Centisome position: 72.27
GC content: 66.23
Gene sequence:
>459_bases ATGCCCACCCTCAACATCAATGGCAAGGACACGCCCGTCAATGCCGACGAATCCACCCCCATCCTCTGGGCCCTGCGTGA CACGCTGGGCATGACAGGCACCAAGTTCGGCTGCGGCGCGGCGCTGTGCGGCGCCTGCACCGTGCACCTCAACGGCGCGG CCATCCGCTCCTGCGTGACGCCGATATCGGCTGCCGTGGGCCAGAAAATTACCACCATCGAAGCCGTGGCTTCCGATCGG GTAGGCAAGGCCGTCCAGGACGCCTGGGTCAAGCACGACGTGGCGCAATGCGGTTATTGCCAGAGCGGCCAGGTGATGAG CGCCACCGCCCTGCTCAAGGCCAAGGCCAAGCCAACCAACGCAGACATCGACGCCGCCATGGCCGGCAACATCTGCCGCT GCGGCACCTATGTGCGCATTCGCGCCGCCATCAAAGACGCCGCCCTGGCCCTGGCCTGA
Upstream 100 bases:
>100_bases GTTTTTTTGATAAAACCCGAATTTAAGCGAATATAAATTCGTCAAGTAGTCCCCCCAGCAATTCCATTCCCCAGTTTTGC CCCCCGCAAGGAGCTCCACG
Downstream 100 bases:
>100_bases AGGAGAACACCATGTATTCCAACTCAACAGACACCCTGGACATCACCGGGCAATTGCCAAAAGGCCTGCAGGCCCTGATG CACAAAGCACAAGAGGGTAC
Product: (2Fe-2S)-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MPTLNINGKDTPVNADESTPILWALRDTLGMTGTKFGCGAALCGACTVHLNGAAIRSCVTPISAAVGQKITTIEAVASDR VGKAVQDAWVKHDVAQCGYCQSGQVMSATALLKAKAKPTNADIDAAMAGNICRCGTYVRIRAAIKDAALALA
Sequences:
>Translated_152_residues MPTLNINGKDTPVNADESTPILWALRDTLGMTGTKFGCGAALCGACTVHLNGAAIRSCVTPISAAVGQKITTIEAVASDR VGKAVQDAWVKHDVAQCGYCQSGQVMSATALLKAKAKPTNADIDAAMAGNICRCGTYVRIRAAIKDAALALA >Mature_151_residues PTLNINGKDTPVNADESTPILWALRDTLGMTGTKFGCGAALCGACTVHLNGAAIRSCVTPISAAVGQKITTIEAVASDRV GKAVQDAWVKHDVAQCGYCQSGQVMSATALLKAKAKPTNADIDAAMAGNICRCGTYVRIRAAIKDAALALA
Specific function: Specific towards N-containing N-heterocyclic substrates, including isoquinoline, isoquinolin-5-ol, phthalazine and quinazoline [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Homo sapiens, GI91823271, Length=144, Percent_Identity=37.5, Blast_Score=74, Evalue=4e-14, Organism=Homo sapiens, GI71773480, Length=90, Percent_Identity=36.6666666666667, Blast_Score=63, Evalue=9e-11, Organism=Escherichia coli, GI1786480, Length=164, Percent_Identity=44.5121951219512, Blast_Score=122, Evalue=8e-30, Organism=Escherichia coli, GI1789232, Length=144, Percent_Identity=38.8888888888889, Blast_Score=91, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17539860, Length=152, Percent_Identity=37.5, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17540638, Length=156, Percent_Identity=36.5384615384615, Blast_Score=98, Evalue=1e-21, Organism=Caenorhabditis elegans, GI32566215, Length=152, Percent_Identity=36.8421052631579, Blast_Score=97, Evalue=3e-21, Organism=Drosophila melanogaster, GI17737937, Length=144, Percent_Identity=36.8055555555556, Blast_Score=97, Evalue=3e-21, Organism=Drosophila melanogaster, GI24647193, Length=163, Percent_Identity=36.8098159509202, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI24647199, Length=155, Percent_Identity=31.6129032258064, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI24647201, Length=156, Percent_Identity=28.8461538461538, Blast_Score=68, Evalue=2e-12, Organism=Drosophila melanogaster, GI24647197, Length=161, Percent_Identity=29.1925465838509, Blast_Score=66, Evalue=1e-11, Organism=Drosophila melanogaster, GI24647195, Length=161, Percent_Identity=29.1925465838509, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.16 [H]
Molecular weight: Translated: 15606; Mature: 15475
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTLNINGKDTPVNADESTPILWALRDTLGMTGTKFGCGAALCGACTVHLNGAAIRSCVT CCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHEEEEEECHHHHHHHHH PISAAVGQKITTIEAVASDRVGKAVQDAWVKHDVAQCGYCQSGQVMSATALLKAKAKPTN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCC ADIDAAMAGNICRCGTYVRIRAAIKDAALALA CCCCHHHCCCEECCCCEEEEHHHHHHHHHHCC >Mature Secondary Structure PTLNINGKDTPVNADESTPILWALRDTLGMTGTKFGCGAALCGACTVHLNGAAIRSCVT CCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCCCCCHHHHHHEEEEEECHHHHHHHHH PISAAVGQKITTIEAVASDRVGKAVQDAWVKHDVAQCGYCQSGQVMSATALLKAKAKPTN HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCCCC ADIDAAMAGNICRCGTYVRIRAAIKDAALALA CCCCHHHCCCEECCCCEEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7782304; 8157655 [H]