The gene/protein map for NC_007948 is currently unavailable.
Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yeeO [C]

Identifier: 91789396

GI number: 91789396

Start: 3742794

End: 3744197

Strand: Reverse

Name: yeeO [C]

Synonym: Bpro_3542

Alternate gene names: 91789396

Gene position: 3744197-3742794 (Counterclockwise)

Preceding gene: 91789397

Following gene: 91789395

Centisome position: 72.0

GC content: 66.52

Gene sequence:

>1404_bases
ATGACAGGTATTGACCAGCGTACGCGCATGTTGCTGGAAGCGCCGATCGGCCCCACGCTGCTGCGCCTTGCCGCACCCAA
TGTGCTGGTGATGGTCGCGCAGGCCGCCGTGGGCCTGATCGAAACCTGGTTCGTCGGCAAGCTGGGCACCGATGCATTGG
CCGGCATGGCGCTGGTGTTTCCCCTCGTGATGCTGATGCAGATGACCTCGGCCGGTGCGATGGGCGGGGGCATCGCCTCG
GCGGTGGCGCGGGCGCTGGGCGCAAACCGGCGCGATGATGCCAATGCGCTGGTCCTGCATGCCATGGTGATCGCGCTGGG
TTTTGGCCTGGCCTTCAGTCTGTGCCTGCTGCTGGGCGGCCGCTGGCTGTATGCGCAAATGGGCGGCAGCGGCGCCTCGC
TGCAGGCGGCACTGGTCTATTCAAACTGGGTGTTCGCCGGCGCAGTGCTGGTGTGGCTGTTCAACTCGCTGGCGGCGGTC
ATACGCGGTACCGGCAACATGGCGGTACCGGCCAACGTCACGGTAGCGGGCGTCCTGGCGCTGGTGCCGCTGTCGCCTTT
GCTGATTTTTGGCTGGGGCCCGGTTCCGGCGCTGGGCATTGCGGGCGGCGCGATTGCGCTGCTGCTGTATTACCTGGCCG
GCAGCATTGCACTGCTTGTCTATCTCGGGTCGAGCCGCAGCCTGCTCAAACCTTCGCTGAAAAACGTCCAGTTGCGCTGG
CTGTTTTTTCGGGACATTCTGCGCATTGGCCTTCTTGGCTCCATTTCCACCGTTGCGACCAATCTCTCGATTGCGGTGGC
GACATCGCTGGCGGGCGGATTTGGGCCTGCGGCTATTGCCGGTTACGGCACGGCGTCGCGCCTGGAGTATTTGCTGGTGC
CCCTGGTTTTTGGTTTGGGTGCGCCGCTCGTGGCGATGGTGGGCACCTGCATGGGGGCGGGCCAGCATGAACGCGCATTG
CGTGCGGCCTGGACAGGCGCGGCCATCGCCTTTGCGCTGACCGAATCGATTGGCCTGGTGGCGGCCGCATTTCCGCGGGC
CTGGCTCTCGCTGTTCGGCAATGACCCCGCAATGCTTGAAGCCGGAACGCTTTACCTGCGCGCGGTCGGCCCGCTCTATG
GATTTTTCGGCCTCGGCCTCGTGCTGTATTTCGCCTCGCAGGGTGCGGCCCGCCTGCTCTGGCCCGTGATGGGCAACCTG
GCGCGCCTTGTGGTCGCCGCACTGGGCGGCTGGCTGGCCATTCGCTGGGGCGGGGGCCTGGTTCAGGTGTATGCCGCACA
GGGCGCGGCGCTGGTGGTGTATGGCGTGGTGATTGCCGCTGCCATTGCCGGCGGGGCCTGGTTCGGCCGGGTCGGCTGGC
CGTGCAGCACGGCAACGCTGCTGCGCCGTCTCCAGTCCGGGTGA

Upstream 100 bases:

>100_bases
ACCAGCGCGGCGAGGTGCTGCAAATCTCTGTCAACAAGGTGGTCGTGCCCCGCCGGCCGACCTGATTCGTGGTCTGCTCG
TGGTTTGAAGCGGGAACGGC

Downstream 100 bases:

>100_bases
GCCTGCGGGCGTGAGAGGGTAGGGATGGTCAGGGCATAGGGCTGTCCCTGTCACGCCAGCCCGCTTCGGTGTGCCAGAAT
CGTCTCAACCTAACCTGCAT

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MTGIDQRTRMLLEAPIGPTLLRLAAPNVLVMVAQAAVGLIETWFVGKLGTDALAGMALVFPLVMLMQMTSAGAMGGGIAS
AVARALGANRRDDANALVLHAMVIALGFGLAFSLCLLLGGRWLYAQMGGSGASLQAALVYSNWVFAGAVLVWLFNSLAAV
IRGTGNMAVPANVTVAGVLALVPLSPLLIFGWGPVPALGIAGGAIALLLYYLAGSIALLVYLGSSRSLLKPSLKNVQLRW
LFFRDILRIGLLGSISTVATNLSIAVATSLAGGFGPAAIAGYGTASRLEYLLVPLVFGLGAPLVAMVGTCMGAGQHERAL
RAAWTGAAIAFALTESIGLVAAAFPRAWLSLFGNDPAMLEAGTLYLRAVGPLYGFFGLGLVLYFASQGAARLLWPVMGNL
ARLVVAALGGWLAIRWGGGLVQVYAAQGAALVVYGVVIAAAIAGGAWFGRVGWPCSTATLLRRLQSG

Sequences:

>Translated_467_residues
MTGIDQRTRMLLEAPIGPTLLRLAAPNVLVMVAQAAVGLIETWFVGKLGTDALAGMALVFPLVMLMQMTSAGAMGGGIAS
AVARALGANRRDDANALVLHAMVIALGFGLAFSLCLLLGGRWLYAQMGGSGASLQAALVYSNWVFAGAVLVWLFNSLAAV
IRGTGNMAVPANVTVAGVLALVPLSPLLIFGWGPVPALGIAGGAIALLLYYLAGSIALLVYLGSSRSLLKPSLKNVQLRW
LFFRDILRIGLLGSISTVATNLSIAVATSLAGGFGPAAIAGYGTASRLEYLLVPLVFGLGAPLVAMVGTCMGAGQHERAL
RAAWTGAAIAFALTESIGLVAAAFPRAWLSLFGNDPAMLEAGTLYLRAVGPLYGFFGLGLVLYFASQGAARLLWPVMGNL
ARLVVAALGGWLAIRWGGGLVQVYAAQGAALVVYGVVIAAAIAGGAWFGRVGWPCSTATLLRRLQSG
>Mature_466_residues
TGIDQRTRMLLEAPIGPTLLRLAAPNVLVMVAQAAVGLIETWFVGKLGTDALAGMALVFPLVMLMQMTSAGAMGGGIASA
VARALGANRRDDANALVLHAMVIALGFGLAFSLCLLLGGRWLYAQMGGSGASLQAALVYSNWVFAGAVLVWLFNSLAAVI
RGTGNMAVPANVTVAGVLALVPLSPLLIFGWGPVPALGIAGGAIALLLYYLAGSIALLVYLGSSRSLLKPSLKNVQLRWL
FFRDILRIGLLGSISTVATNLSIAVATSLAGGFGPAAIAGYGTASRLEYLLVPLVFGLGAPLVAMVGTCMGAGQHERALR
AAWTGAAIAFALTESIGLVAAAFPRAWLSLFGNDPAMLEAGTLYLRAVGPLYGFFGLGLVLYFASQGAARLLWPVMGNLA
RLVVAALGGWLAIRWGGGLVQVYAAQGAALVVYGVVIAAAIAGGAWFGRVGWPCSTATLLRRLQSG

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 47994; Mature: 47863

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGIDQRTRMLLEAPIGPTLLRLAAPNVLVMVAQAAVGLIETWFVGKLGTDALAGMALVF
CCCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
PLVMLMQMTSAGAMGGGIASAVARALGANRRDDANALVLHAMVIALGFGLAFSLCLLLGG
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
RWLYAQMGGSGASLQAALVYSNWVFAGAVLVWLFNSLAAVIRGTGNMAVPANVTVAGVLA
CEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHH
LVPLSPLLIFGWGPVPALGIAGGAIALLLYYLAGSIALLVYLGSSRSLLKPSLKNVQLRW
HHHHCCEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHEEHEECCCCCHHCCHHHCHHHHH
LFFRDILRIGLLGSISTVATNLSIAVATSLAGGFGPAAIAGYGTASRLEYLLVPLVFGLG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC
APLVAMVGTCMGAGQHERALRAAWTGAAIAFALTESIGLVAAAFPRAWLSLFGNDPAMLE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
AGTLYLRAVGPLYGFFGLGLVLYFASQGAARLLWPVMGNLARLVVAALGGWLAIRWGGGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCE
VQVYAAQGAALVVYGVVIAAAIAGGAWFGRVGWPCSTATLLRRLQSG
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TGIDQRTRMLLEAPIGPTLLRLAAPNVLVMVAQAAVGLIETWFVGKLGTDALAGMALVF
CCCCHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
PLVMLMQMTSAGAMGGGIASAVARALGANRRDDANALVLHAMVIALGFGLAFSLCLLLGG
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
RWLYAQMGGSGASLQAALVYSNWVFAGAVLVWLFNSLAAVIRGTGNMAVPANVTVAGVLA
CEEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHH
LVPLSPLLIFGWGPVPALGIAGGAIALLLYYLAGSIALLVYLGSSRSLLKPSLKNVQLRW
HHHHCCEEEECCCCCCHHHHCHHHHHHHHHHHHHHHHEEHEECCCCCHHCCHHHCHHHHH
LFFRDILRIGLLGSISTVATNLSIAVATSLAGGFGPAAIAGYGTASRLEYLLVPLVFGLG
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC
APLVAMVGTCMGAGQHERALRAAWTGAAIAFALTESIGLVAAAFPRAWLSLFGNDPAMLE
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
AGTLYLRAVGPLYGFFGLGLVLYFASQGAARLLWPVMGNLARLVVAALGGWLAIRWGGGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCE
VQVYAAQGAALVVYGVVIAAAIAGGAWFGRVGWPCSTATLLRRLQSG
EEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]