| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is corA [H]
Identifier: 91789395
GI number: 91789395
Start: 3741701
End: 3742675
Strand: Reverse
Name: corA [H]
Synonym: Bpro_3541
Alternate gene names: 91789395
Gene position: 3742675-3741701 (Counterclockwise)
Preceding gene: 91789396
Following gene: 91789393
Centisome position: 71.97
GC content: 60.62
Gene sequence:
>975_bases ATGCTCATCAATTGCGTGGTCTACCAGAACGGCACCAAACTGGCCGACATTCCCGTCAGCGAGATCAGCGAATATCTTTC GCACCCCGATGCCTTCGTATGGGTGGCGCTGCGGGACGCCACGCCGGAAGAACTCGAGGAAATGCAGCGTGAGTTTGACC TGCATGAGCTGGCGGTCGAAGATTCGCGGCATGGCCATCAGCGGCCCAAAATCGAGGAGTACGGCGCTTCGCTGTTTTCC GTGCTGCAACTGGTCGAGCCGGTGCCGGACCATCCCGGCGAACTCAACATCGGCGAGGTCGATGTGTTCACCGGGAGCAA CTATGTGCTCTCGGTGCGTAACCGCAGCCAGAAAGGCTTCCTGGGTGTACGCGCTCGCTGCGAGGGGGAGCCCGAGCTGT TGCGGCACGGCTCCGGCTTTGTGCTGTATGCATTGATGGATGCGGTGGTGGACCGCTACTTTCCCATCATCGACCAGCTC GAGACCGAGCTGGAAACCATCGAACGGGACATCTTTTCGAAAGGCTCGGCCCGCTCCAACATCGAGCGGCTGTATGAGCT CAAGGGCCGGGTGATGGTGCTCAAGCATGCGGTGGCGCCGCTGCTTGAAGCCGCGAGCAAACTGTATGGCGGCCGGGTGC CGCACATGTGCGCCGGCGTGCAGGAGTATTTTCGCGATGTGGTGGATCACCTCACGCGCATCAATGCGCAGATTGACAAC ATGCGCGACACCATTGGCACGGCCATCCAGGTCAACCTGGCGATGGTCACGATTGGAGAGAGCGAAGTCACCAAACGCCT GGCGGCCTGGGCCAGTATTTTTGCCGTGTGCACCGCGTTTGCGGGCATCTGGGGCATGAACTTTGAAAGCATGCCGGAAC TCAAGTGGCGCTACGGCTATCTAATGGCGCTGGGCCTGATCGTCGTGGCCTGCTCGCTGCTCTACTGGCGCTTCAAGCGC GCACGGTGGCTGTAG
Upstream 100 bases:
>100_bases GTAGGGATGGTCAGGGCATAGGGCTGTCCCTGTCACGCCAGCCCGCTTCGGTGTGCCAGAATCGTCTCAACCTAACCTGC ATATTCCGGCGACGCCTCCT
Downstream 100 bases:
>100_bases GGACAGGATAGGGGAAAGGCGGGCGGATGCCGCGCAGGGTATCTCTCTGGCTCTAACGCGGTGGCTTGAACGCTGCACGG GCGGCCAGGGCCTTTTGCCG
Product: Mg2+ transporter protein, CorA-like protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MLINCVVYQNGTKLADIPVSEISEYLSHPDAFVWVALRDATPEELEEMQREFDLHELAVEDSRHGHQRPKIEEYGASLFS VLQLVEPVPDHPGELNIGEVDVFTGSNYVLSVRNRSQKGFLGVRARCEGEPELLRHGSGFVLYALMDAVVDRYFPIIDQL ETELETIERDIFSKGSARSNIERLYELKGRVMVLKHAVAPLLEAASKLYGGRVPHMCAGVQEYFRDVVDHLTRINAQIDN MRDTIGTAIQVNLAMVTIGESEVTKRLAAWASIFAVCTAFAGIWGMNFESMPELKWRYGYLMALGLIVVACSLLYWRFKR ARWL
Sequences:
>Translated_324_residues MLINCVVYQNGTKLADIPVSEISEYLSHPDAFVWVALRDATPEELEEMQREFDLHELAVEDSRHGHQRPKIEEYGASLFS VLQLVEPVPDHPGELNIGEVDVFTGSNYVLSVRNRSQKGFLGVRARCEGEPELLRHGSGFVLYALMDAVVDRYFPIIDQL ETELETIERDIFSKGSARSNIERLYELKGRVMVLKHAVAPLLEAASKLYGGRVPHMCAGVQEYFRDVVDHLTRINAQIDN MRDTIGTAIQVNLAMVTIGESEVTKRLAAWASIFAVCTAFAGIWGMNFESMPELKWRYGYLMALGLIVVACSLLYWRFKR ARWL >Mature_324_residues MLINCVVYQNGTKLADIPVSEISEYLSHPDAFVWVALRDATPEELEEMQREFDLHELAVEDSRHGHQRPKIEEYGASLFS VLQLVEPVPDHPGELNIGEVDVFTGSNYVLSVRNRSQKGFLGVRARCEGEPELLRHGSGFVLYALMDAVVDRYFPIIDQL ETELETIERDIFSKGSARSNIERLYELKGRVMVLKHAVAPLLEAASKLYGGRVPHMCAGVQEYFRDVVDHLTRINAQIDN MRDTIGTAIQVNLAMVTIGESEVTKRLAAWASIFAVCTAFAGIWGMNFESMPELKWRYGYLMALGLIVVACSLLYWRFKR ARWL
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=251, Percent_Identity=23.5059760956175, Blast_Score=62, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 36699; Mature: 36699
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINCVVYQNGTKLADIPVSEISEYLSHPDAFVWVALRDATPEELEEMQREFDLHELAVE CEEEEEEEECCCEEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH DSRHGHQRPKIEEYGASLFSVLQLVEPVPDHPGELNIGEVDVFTGSNYVLSVRNRSQKGF HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCC LGVRARCEGEPELLRHGSGFVLYALMDAVVDRYFPIIDQLETELETIERDIFSKGSARSN EEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IERLYELKGRVMVLKHAVAPLLEAASKLYGGRVPHMCAGVQEYFRDVVDHLTRINAQIDN HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MRDTIGTAIQVNLAMVTIGESEVTKRLAAWASIFAVCTAFAGIWGMNFESMPELKWRYGY HHHHHCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LMALGLIVVACSLLYWRFKRARWL HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLINCVVYQNGTKLADIPVSEISEYLSHPDAFVWVALRDATPEELEEMQREFDLHELAVE CEEEEEEEECCCEEECCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHH DSRHGHQRPKIEEYGASLFSVLQLVEPVPDHPGELNIGEVDVFTGSNYVLSVRNRSQKGF HCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCC LGVRARCEGEPELLRHGSGFVLYALMDAVVDRYFPIIDQLETELETIERDIFSKGSARSN EEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH IERLYELKGRVMVLKHAVAPLLEAASKLYGGRVPHMCAGVQEYFRDVVDHLTRINAQIDN HHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH MRDTIGTAIQVNLAMVTIGESEVTKRLAAWASIFAVCTAFAGIWGMNFESMPELKWRYGY HHHHHCCEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LMALGLIVVACSLLYWRFKRARWL HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]