| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is copA [H]
Identifier: 91789350
GI number: 91789350
Start: 3696966
End: 3697241
Strand: Reverse
Name: copA [H]
Synonym: Bpro_3496
Alternate gene names: 91789350
Gene position: 3697241-3696966 (Counterclockwise)
Preceding gene: 91789368
Following gene: 91789349
Centisome position: 71.1
GC content: 62.68
Gene sequence:
>276_bases ATGAGCAGCACCGCCACCCTCGCGCCCACCGCAATCGGTGGCTTGGCGGTCCGGTCGTTTCCGATCGAGGGCATGACCTG TGCATCTTGCGTGTTTAACGAACACTGGGCGCTCAACGATCTGTTCTGGGCGTTCTCCTATAACGTGGTGGCGACTCCCT TGGTGGCACTGGGGCTGCTGAGCCCGGTCGTTGCCGGCGCGGCCATGGCGTTCAGCAGCGTCAGCGTGGTTGCCAATGCC TTGACGCTGCGCCACTGGAAAGGAGATCGACCATGA
Upstream 100 bases:
>100_bases CGACACTGAATTGGAAGCGGCACCCTTGACTTTCCAACAGTGGCAAGGTCGAGACTGAGTCAACGGCCGCGAAAGCGGCT TTAGCCTACCCAGGAATCCC
Downstream 100 bases:
>100_bases TGTACAACACCGCACCACGGCAAGAACGGGCCGCCAGCAAGCCGGCAGGATACGGTCGTCACCGAACGCCGGCGCCGATG AACGCGCAGCGGTTCAACAT
Product: cation transport ATPase-like protein
Products: ADP; Orthophosphate. [C]
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MSSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLLSPVVAGAAMAFSSVSVVANA LTLRHWKGDRP
Sequences:
>Translated_91_residues MSSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLLSPVVAGAAMAFSSVSVVANA LTLRHWKGDRP >Mature_90_residues SSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLLSPVVAGAAMAFSSVSVVANAL TLRHWKGDRP
Specific function: Involved in copper export [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 HMA domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR006403 - InterPro: IPR001366 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 - InterPro: IPR000150 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: 3.6.3.4 [C]
Molecular weight: Translated: 9525; Mature: 9394
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLL CCCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH SPVVAGAAMAFSSVSVVANALTLRHWKGDRP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSTATLAPTAIGGLAVRSFPIEGMTCASCVFNEHWALNDLFWAFSYNVVATPLVALGLL CCCCCCCCHHHCCHHHCCCCCCCCHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH SPVVAGAAMAFSSVSVVANALTLRHWKGDRP HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Cu [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; H2O [C]
Specific reaction: ATP + H2O = ADP + Orthophosphate. [C]
General reaction: Phosphorous acid anhydride hydrolysis [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA