| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789347
Identifier: 91789347
GI number: 91789347
Start: 3694542
End: 3695828
Strand: Reverse
Name: 91789347
Synonym: Bpro_3493
Alternate gene names: NA
Gene position: 3695828-3694542 (Counterclockwise)
Preceding gene: 91789348
Following gene: 91789346
Centisome position: 71.07
GC content: 61.85
Gene sequence:
>1287_bases ATGTCTATTTCGTTTCCGATTTGCCGGGCTGCCGTTGCCGCTCTGTTCGTTGCCATGGGGTCGCCATCATGGGCAACTGA CCCGTTGACCCTGGCGGAGGCGCAGCGCATTGCGGTGGGCCGTTCCCAGCAATTGGTCGCTCAAAACGCGCTTACTGCCG CCGCCCGCGAGCAGGCCGTGGCTGCCGGCCAGTTGCCCGACCCGGTGCTCAAGCTGGGCATTGACAACCTGCCGGCCAAT GGCCCAGACCGTCTCAGCCTGACGCGTGACTTCATGACCATGCGCCGCATTGGCGTCATGCAGGAGATTCCGCGCGCCGA AAAACGCCAGCTCAGGGCGGAAAAGTTTGAACGCGACGCTGAGCGAGTGAGGGCGCAGCGGCAACTGACGCTGGCCAACG TGCAGCGCGACACGGCGCTGGCCTGGCTGGATCGTTATTACGCTCAAGCCCAGCGTGAATTGTTGCAGCAACAAATTGAG GAAACCCGACTGCAGGTTCAAGCCGCAGACAGCGCCTTTCGCACCGGCCGGGGCAGCCAGGCTGACGTGTTCGCAGCCCG CGCCGCAGTGATCATGCTGCAAGACCGCCTCAGCCAAATTGATCGCCAGTCGCGCAGCGCTGCTCTGATGCTGGCCCGGT GGGTGGGTGCTTCTGCCGTTGAACGACCAAGCTCTGGCTCGCCACCCTGGCAAAGCACGCCGCTACAGGGTGATATTTCG AGCGAACCCCTCAAGCGGCATCCTGATCTGCTGATAATAAGTGCCGAGATTGATGCCGCTGAAACTGAAGTCCGGCTTGC TCAGGCTAATAAGAAGGCCGACATCAGCGTGGAGGCGAGCTACGCTCAGCGCGGCCCAGCCTTCTCCAACATGCTCTCCA TCGGGGTATCCATCCCCTTGCAGTGGGACCCCAAAAATCGCCAGAACCGTGAGTTAGGCGCCAAGCTGGCCATGGTCGAT GAGGCTAAGGCCAGATACGAGGACTTGCTGCGCAAGAACGAAGCTGAAGTCCGCAGCCTGCTCAACGAATGGCAGACGGG TAAGGACCGGCTGGTCCGATACCGTGATGAGCTGATTCCCACCGCCCGACAGCGCTCCGAGGCGACGCTCACGGCCTATC GCATTGGCAAAAGCGACCTGGCTGCTGGGCTGTCAGCACGCCGCGACGAAATTGATGTCCGCATGCAGGCCCTGACCCTG GAGATGGAAACGGCGCGTTCCTGGGCGCAGCTCAACTTTCTGATCCCCGACCTCCACATTTCCGCACCCGCCAAGGACCA ACCATGA
Upstream 100 bases:
>100_bases CGGAACTGTTGCTTCCGCATTTGACCTCTCAGACCACTTAGCTCCTGTCTGATGCATTCCTGGTGCATCGACAGGTCGTT ATTCGTGCTCTGGAGGTTTT
Downstream 100 bases:
>100_bases ACAAGAAATATCTCATTGCCGCGCTGCTTGCTGCGGGCGTGCTTGGCGCCGCCGGTTACGGTCTGTACACCCTGGGGGTG AAAAAGGGCGGCACCATGCC
Product: outer membrane efflux protein
Products: NA
Alternate protein names: CzcC Family Heavy Metal RND Efflux Outer Membrane Protein; Outer Membrane Protein; Outer Membrane Cation Efflux Protein; Cation Efflux Protein; Heavy Metal RND Efflux Outer Membrane Protein CzcC Family; Cobalt-Zinc-Cadmium Resistance Outer Membrane Porin; Copper/Silver Resistance Outer Membrane Protein; Heavy Metal RND Efflux CzcC Family; Cation Resistance Protein CzcC; Efflux System Outer Membrane Protein; Outer Membrane Silver Efflux Protein; Outer Membrane Protein lC; Outer Membrane Heavy Metal Efflux Protein; Outer Membrane Cation Efflux System Protein CzcC; Metal Ion Efflux Outer Membrane Protein Family Protein; RND Family Metal Ion Efflux Pump Outer Membrane Protein
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MSISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAVAAGQLPDPVLKLGIDNLPAN GPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDAERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIE ETRLQVQAADSAFRTGRGSQADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPLQWDPKNRQNRELGAKLAMVD EAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIPTARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTL EMETARSWAQLNFLIPDLHISAPAKDQP
Sequences:
>Translated_428_residues MSISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAVAAGQLPDPVLKLGIDNLPAN GPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDAERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIE ETRLQVQAADSAFRTGRGSQADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPLQWDPKNRQNRELGAKLAMVD EAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIPTARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTL EMETARSWAQLNFLIPDLHISAPAKDQP >Mature_427_residues SISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAVAAGQLPDPVLKLGIDNLPANG PDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDAERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIEE TRLQVQAADSAFRTGRGSQADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDISS EPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPLQWDPKNRQNRELGAKLAMVDE AKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIPTARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTLE METARSWAQLNFLIPDLHISAPAKDQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47580; Mature: 47448
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAV CCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AAGQLPDPVLKLGIDNLPANGPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDA HCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIEETRLQVQAADSAFRTGRGSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCC SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPL CCCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHHCEEEEE QWDPKNRQNRELGAKLAMVDEAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIP EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC TARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTLEMETARSWAQLNFLIPDLHI HHHHCCCCEEHHEECCHHHHHHHHHHCHHHHHHHHHHHEEEHHHHHHHHHHEEEECCCEE SAPAKDQP CCCCCCCC >Mature Secondary Structure SISFPICRAAVAALFVAMGSPSWATDPLTLAEAQRIAVGRSQQLVAQNALTAAAREQAV CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AAGQLPDPVLKLGIDNLPANGPDRLSLTRDFMTMRRIGVMQEIPRAEKRQLRAEKFERDA HCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ERVRAQRQLTLANVQRDTALAWLDRYYAQAQRELLQQQIEETRLQVQAADSAFRTGRGSQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ADVFAARAAVIMLQDRLSQIDRQSRSAALMLARWVGASAVERPSSGSPPWQSTPLQGDIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCC SEPLKRHPDLLIISAEIDAAETEVRLAQANKKADISVEASYAQRGPAFSNMLSIGVSIPL CCCHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEEEEHHHHCCCHHHHHHHHCEEEEE QWDPKNRQNRELGAKLAMVDEAKARYEDLLRKNEAEVRSLLNEWQTGKDRLVRYRDELIP EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCC TARQRSEATLTAYRIGKSDLAAGLSARRDEIDVRMQALTLEMETARSWAQLNFLIPDLHI HHHHCCCCEEHHEECCHHHHHHHHHHCHHHHHHHHHHHEEEHHHHHHHHHHEEEECCCEE SAPAKDQP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA