Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is silB [H]

Identifier: 91789346

GI number: 91789346

Start: 3692908

End: 3694545

Strand: Reverse

Name: silB [H]

Synonym: Bpro_3492

Alternate gene names: 91789346

Gene position: 3694545-3692908 (Counterclockwise)

Preceding gene: 91789347

Following gene: 91789345

Centisome position: 71.05

GC content: 64.41

Gene sequence:

>1638_bases
ATGAACAAGAAATATCTCATTGCCGCGCTGCTTGCTGCGGGCGTGCTTGGCGCCGCCGGTTACGGTCTGTACACCCTGGG
GGTGAAAAAGGGCGGCACCATGCCTGCCGCCAGTGCACCTGCCAACGCTGGCAGCCAAAGTGCTGCGCCCGCGGCCGCTC
CCCAGAGCGTCGCCGATGGTGAAGAGGCGACCCGCCGCCATATCAGCGCAGGCCTCAAAGCGGGGGATACCGATCCGATT
ACCGGCAGCAAGATTCTTTACTACCACGACCCCATGGTGCCAAGCAGCAAGTTCGACAAGCCGGCCAAGTCGCCTTTTAT
GGACATGATGCTGGTGCCGGTCTATGCGAGTGGCGACGCCGATCAAGGCAAGGTCACCGTCAGCCCGCGCATCCAGCAGA
ACCTGGGGGTGCGTACCGCGACGGTTACCGAGGGCACGCTGTCGCCCCAGGTTTCCGCTGTAGGCAGCATTGCCTACAAC
GAGCGTGATCAGGCCACCGTCCAGGCCCGCGCCACCGGCTATGTGGAGCGGCTTCATGTGCGGGCCACGTTGGACCGGGT
GGCGAAGGGTCAGCCGCTGGTAGATCTCTATGTGCCGGACTGGGTGGCTGCCCAGGAAGAGTTTTTGGCCATCAAACGCA
TGCAAGGGAATGACCTGGCGTCACTGGTGGACGGCGCCCGCCAGCGTATGCGACAAGCTGGCATGAGCGATGAGCAAATT
CGCCAGGTTGAAGCCAGCGGAAGGACGCAGGCTCGTATTACCGTGACGGCGCCGCTAGGCGGCGTGGTGGTGGAACTAAT
GGCGCGCGAAGGCATGACGGTAATGGCCGGCACCACTCTGTTTCGCATCAATGGCCTGTCCACCGTCTGGGCTAACGCCG
AGGTGCCTGAGAGCCAGTCGGCCCTGCTGCGCCCGGGCGCCAAGGTGCAGGCGCGCAGCCCGGCGGCGCCGGGCACCACC
TTCAACGGCAAGGTGCAGGCGATCCTGCCCGAGGTCAACCCGGCCACACGCACGCTCAGGGCCAGGATGGAACTGGCCAA
CCCGGGCGCACGTCTGGTGCCTGGCATGTTCGTATCCATGCAGTTCATGGACATGCGCGCCGAGAAGGCATTGCTGGTGC
CCACCGAAGCCGTCATCCAGACGGGCAAGCGTACGGTCGTCATGCTGGCCGAGGAAAACGGACGCTTTCGGCCGGTTGAC
GTGGAAGCCGGGATCGAGGCCGGCGGTCAAACTGAAATCAAGCGCGGGCTGCAGGCTGGCCAGCGCGTCGTGGTGTCTTC
ACAGTTCCTGATCGATTCCGAAGCCAGCCTCAAAGGGGTCGAAGCCCGGCTCAACGAGGCGCCCAAGCCGGTCGCGGGCA
ATACCGCGCCGCGGCACGAAGGAGAGGCGAAGATCGAGGCAGTTGGCAAGGACGCGATCACTCTGTCGCATGGGCCAATC
CCCTCACTGAAGTGGGGGGCTATGACCATGGACTTCAAGTCACCGCCCCCACAAGCGCTACCGCGCAACCTGGAGGCCGG
CGACCGGGTGAGCTTTGAGTTCTACATGGATGCGGACGGACTGCCCCAGTTGACCCGTGTCTCGCCTCTGGCTTCCGCGC
CAGGCTCCACGCCAGCTTCCGCAGGGGGCAAGAAGTGA

Upstream 100 bases:

>100_bases
TGCAGGCCCTGACCCTGGAGATGGAAACGGCGCGTTCCTGGGCGCAGCTCAACTTTCTGATCCCCGACCTCCACATTTCC
GCACCCGCCAAGGACCAACC

Downstream 100 bases:

>100_bases
TCGCCCGTCTGATTCGCTGGTCTATCGCCAACCGCTTCCTGGTGCTGCTGGCTACGCTCATGGTGAGTGCCTGGGGCGTG
TACTCGGTGCTCAGGACGCC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MNKKYLIAALLAAGVLGAAGYGLYTLGVKKGGTMPAASAPANAGSQSAAPAAAPQSVADGEEATRRHISAGLKAGDTDPI
TGSKILYYHDPMVPSSKFDKPAKSPFMDMMLVPVYASGDADQGKVTVSPRIQQNLGVRTATVTEGTLSPQVSAVGSIAYN
ERDQATVQARATGYVERLHVRATLDRVAKGQPLVDLYVPDWVAAQEEFLAIKRMQGNDLASLVDGARQRMRQAGMSDEQI
RQVEASGRTQARITVTAPLGGVVVELMAREGMTVMAGTTLFRINGLSTVWANAEVPESQSALLRPGAKVQARSPAAPGTT
FNGKVQAILPEVNPATRTLRARMELANPGARLVPGMFVSMQFMDMRAEKALLVPTEAVIQTGKRTVVMLAEENGRFRPVD
VEAGIEAGGQTEIKRGLQAGQRVVVSSQFLIDSEASLKGVEARLNEAPKPVAGNTAPRHEGEAKIEAVGKDAITLSHGPI
PSLKWGAMTMDFKSPPPQALPRNLEAGDRVSFEFYMDADGLPQLTRVSPLASAPGSTPASAGGKK

Sequences:

>Translated_545_residues
MNKKYLIAALLAAGVLGAAGYGLYTLGVKKGGTMPAASAPANAGSQSAAPAAAPQSVADGEEATRRHISAGLKAGDTDPI
TGSKILYYHDPMVPSSKFDKPAKSPFMDMMLVPVYASGDADQGKVTVSPRIQQNLGVRTATVTEGTLSPQVSAVGSIAYN
ERDQATVQARATGYVERLHVRATLDRVAKGQPLVDLYVPDWVAAQEEFLAIKRMQGNDLASLVDGARQRMRQAGMSDEQI
RQVEASGRTQARITVTAPLGGVVVELMAREGMTVMAGTTLFRINGLSTVWANAEVPESQSALLRPGAKVQARSPAAPGTT
FNGKVQAILPEVNPATRTLRARMELANPGARLVPGMFVSMQFMDMRAEKALLVPTEAVIQTGKRTVVMLAEENGRFRPVD
VEAGIEAGGQTEIKRGLQAGQRVVVSSQFLIDSEASLKGVEARLNEAPKPVAGNTAPRHEGEAKIEAVGKDAITLSHGPI
PSLKWGAMTMDFKSPPPQALPRNLEAGDRVSFEFYMDADGLPQLTRVSPLASAPGSTPASAGGKK
>Mature_545_residues
MNKKYLIAALLAAGVLGAAGYGLYTLGVKKGGTMPAASAPANAGSQSAAPAAAPQSVADGEEATRRHISAGLKAGDTDPI
TGSKILYYHDPMVPSSKFDKPAKSPFMDMMLVPVYASGDADQGKVTVSPRIQQNLGVRTATVTEGTLSPQVSAVGSIAYN
ERDQATVQARATGYVERLHVRATLDRVAKGQPLVDLYVPDWVAAQEEFLAIKRMQGNDLASLVDGARQRMRQAGMSDEQI
RQVEASGRTQARITVTAPLGGVVVELMAREGMTVMAGTTLFRINGLSTVWANAEVPESQSALLRPGAKVQARSPAAPGTT
FNGKVQAILPEVNPATRTLRARMELANPGARLVPGMFVSMQFMDMRAEKALLVPTEAVIQTGKRTVVMLAEENGRFRPVD
VEAGIEAGGQTEIKRGLQAGQRVVVSSQFLIDSEASLKGVEARLNEAPKPVAGNTAPRHEGEAKIEAVGKDAITLSHGPI
PSLKWGAMTMDFKSPPPQALPRNLEAGDRVSFEFYMDADGLPQLTRVSPLASAPGSTPASAGGKK

Specific function: Component of the sil cation efflux system that confers resistance to silver. May be part of a three-component cation/proton antiporter [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1786787, Length=361, Percent_Identity=40.1662049861496, Blast_Score=276, Evalue=3e-75,
Organism=Escherichia coli, GI87081796, Length=209, Percent_Identity=29.1866028708134, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57483; Mature: 57483

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKYLIAALLAAGVLGAAGYGLYTLGVKKGGTMPAASAPANAGSQSAAPAAAPQSVADG
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
EEATRRHISAGLKAGDTDPITGSKILYYHDPMVPSSKFDKPAKSPFMDMMLVPVYASGDA
HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHEEEEEEEECCCC
DQGKVTVSPRIQQNLGVRTATVTEGTLSPQVSAVGSIAYNERDQATVQARATGYVERLHV
CCCEEEECCCHHHCCCCEEEEEECCCCCCCHHHHHHEEECCCCCCEEEHHHHHHHHHHHH
RATLDRVAKGQPLVDLYVPDWVAAQEEFLAIKRMQGNDLASLVDGARQRMRQAGMSDEQI
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
RQVEASGRTQARITVTAPLGGVVVELMAREGMTVMAGTTLFRINGLSTVWANAEVPESQS
HHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCEEEEECCCEEEECCCCCCCCCH
ALLRPGAKVQARSPAAPGTTFNGKVQAILPEVNPATRTLRARMELANPGARLVPGMFVSM
HHHCCCCCEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHCCCHHEEH
QFMDMRAEKALLVPTEAVIQTGKRTVVMLAEENGRFRPVDVEAGIEAGGQTEIKRGLQAG
HHHHHCCCCEEECCCHHHHHCCCEEEEEEECCCCCEEEEEHHCCCCCCCHHHHHHHHHHC
QRVVVSSQFLIDSEASLKGVEARLNEAPKPVAGNTAPRHEGEAKIEAVGKDAITLSHGPI
CEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCC
PSLKWGAMTMDFKSPPPQALPRNLEAGDRVSFEFYMDADGLPQLTRVSPLASAPGSTPAS
CCCCCCEEEECCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCHHHCCCHHCCCCCCCCC
AGGKK
CCCCC
>Mature Secondary Structure
MNKKYLIAALLAAGVLGAAGYGLYTLGVKKGGTMPAASAPANAGSQSAAPAAAPQSVADG
CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
EEATRRHISAGLKAGDTDPITGSKILYYHDPMVPSSKFDKPAKSPFMDMMLVPVYASGDA
HHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHEEEEEEEECCCC
DQGKVTVSPRIQQNLGVRTATVTEGTLSPQVSAVGSIAYNERDQATVQARATGYVERLHV
CCCEEEECCCHHHCCCCEEEEEECCCCCCCHHHHHHEEECCCCCCEEEHHHHHHHHHHHH
RATLDRVAKGQPLVDLYVPDWVAAQEEFLAIKRMQGNDLASLVDGARQRMRQAGMSDEQI
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHH
RQVEASGRTQARITVTAPLGGVVVELMAREGMTVMAGTTLFRINGLSTVWANAEVPESQS
HHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEECCEEEEECCCEEEECCCCCCCCCH
ALLRPGAKVQARSPAAPGTTFNGKVQAILPEVNPATRTLRARMELANPGARLVPGMFVSM
HHHCCCCCEEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHCCCHHEEH
QFMDMRAEKALLVPTEAVIQTGKRTVVMLAEENGRFRPVDVEAGIEAGGQTEIKRGLQAG
HHHHHCCCCEEECCCHHHHHCCCEEEEEEECCCCCEEEEEHHCCCCCCCHHHHHHHHHHC
QRVVVSSQFLIDSEASLKGVEARLNEAPKPVAGNTAPRHEGEAKIEAVGKDAITLSHGPI
CEEEEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCCC
PSLKWGAMTMDFKSPPPQALPRNLEAGDRVSFEFYMDADGLPQLTRVSPLASAPGSTPAS
CCCCCCEEEECCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCHHHCCCHHCCCCCCCCC
AGGKK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9930866 [H]