Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is ylcC [C]

Identifier: 91789344

GI number: 91789344

Start: 3689355

End: 3689693

Strand: Reverse

Name: ylcC [C]

Synonym: Bpro_3490

Alternate gene names: 91789344

Gene position: 3689693-3689355 (Counterclockwise)

Preceding gene: 91789345

Following gene: 91789334

Centisome position: 70.95

GC content: 49.85

Gene sequence:

>339_bases
ATGAAGAAAATCGCAATCGCTTCCCTGGTTTTTGTCGCAGCATCCATCGCGTTTGCCCAGTCAAAAATGGGCGATATGAA
GGGCATGGACACGGTCATGAAATCTGTATCCACCGCTCAGACTACACATGAAGCGAACGGCACCATCAAGAAGATCGATG
CTCAAAAAGGCTGGGCAACGATTACGCATGGGCCGGTTAACAGTCTGAGCTGGCCACCCATGACCATGAGTTTCAAGGTC
AAAAATAAGAGCCTGCTCGACAAGCTGACGGTCGGCAAAAAAGTGGACTTCGGGTTTGTGAAGGAAGGTGAGGACTATGT
CATGACGACAGTCCGGTAA

Upstream 100 bases:

>100_bases
AGCGCCAAGCCACAGGCAGGCCTTTCCGGGAGCAACGCATTCCCGCCAGTTGAACTTAATTCTCGACCGTTTTATTAGCC
ACTCTCAACAGGAGTTTTTC

Downstream 100 bases:

>100_bases
GGTCCGTCGCCGTACCCTTACTGCATCAAGGCCGTAAGAAACTACCCCGGACGAAGTCCCCGGTAGTTCCTTGAACGACT
TACCTGGCCGGCTGAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Secretion Protein HlyD; Heavy Metal Efflux System Protein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWATITHGPVNSLSWPPMTMSFKV
KNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR

Sequences:

>Translated_112_residues
MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWATITHGPVNSLSWPPMTMSFKV
KNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR
>Mature_112_residues
MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWATITHGPVNSLSWPPMTMSFKV
KNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR

Specific function: Unknown

COG id: COG5569

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12186; Mature: 12186

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWAT
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE
ITHGPVNSLSWPPMTMSFKVKNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR
EECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEECCCCEEEEECC
>Mature Secondary Structure
MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWAT
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE
ITHGPVNSLSWPPMTMSFKVKNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR
EECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA