| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is ylcC [C]
Identifier: 91789344
GI number: 91789344
Start: 3689355
End: 3689693
Strand: Reverse
Name: ylcC [C]
Synonym: Bpro_3490
Alternate gene names: 91789344
Gene position: 3689693-3689355 (Counterclockwise)
Preceding gene: 91789345
Following gene: 91789334
Centisome position: 70.95
GC content: 49.85
Gene sequence:
>339_bases ATGAAGAAAATCGCAATCGCTTCCCTGGTTTTTGTCGCAGCATCCATCGCGTTTGCCCAGTCAAAAATGGGCGATATGAA GGGCATGGACACGGTCATGAAATCTGTATCCACCGCTCAGACTACACATGAAGCGAACGGCACCATCAAGAAGATCGATG CTCAAAAAGGCTGGGCAACGATTACGCATGGGCCGGTTAACAGTCTGAGCTGGCCACCCATGACCATGAGTTTCAAGGTC AAAAATAAGAGCCTGCTCGACAAGCTGACGGTCGGCAAAAAAGTGGACTTCGGGTTTGTGAAGGAAGGTGAGGACTATGT CATGACGACAGTCCGGTAA
Upstream 100 bases:
>100_bases AGCGCCAAGCCACAGGCAGGCCTTTCCGGGAGCAACGCATTCCCGCCAGTTGAACTTAATTCTCGACCGTTTTATTAGCC ACTCTCAACAGGAGTTTTTC
Downstream 100 bases:
>100_bases GGTCCGTCGCCGTACCCTTACTGCATCAAGGCCGTAAGAAACTACCCCGGACGAAGTCCCCGGTAGTTCCTTGAACGACT TACCTGGCCGGCTGAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Secretion Protein HlyD; Heavy Metal Efflux System Protein
Number of amino acids: Translated: 112; Mature: 112
Protein sequence:
>112_residues MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWATITHGPVNSLSWPPMTMSFKV KNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR
Sequences:
>Translated_112_residues MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWATITHGPVNSLSWPPMTMSFKV KNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR >Mature_112_residues MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWATITHGPVNSLSWPPMTMSFKV KNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR
Specific function: Unknown
COG id: COG5569
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12186; Mature: 12186
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWAT CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE ITHGPVNSLSWPPMTMSFKVKNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR EECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEECCCCEEEEECC >Mature Secondary Structure MKKIAIASLVFVAASIAFAQSKMGDMKGMDTVMKSVSTAQTTHEANGTIKKIDAQKGWAT CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEE ITHGPVNSLSWPPMTMSFKVKNKSLLDKLTVGKKVDFGFVKEGEDYVMTTVR EECCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCCEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA