Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789334

Identifier: 91789334

GI number: 91789334

Start: 3681118

End: 3682191

Strand: Reverse

Name: 91789334

Synonym: Bpro_3480

Alternate gene names: NA

Gene position: 3682191-3681118 (Counterclockwise)

Preceding gene: 91789344

Following gene: 91789333

Centisome position: 70.81

GC content: 66.57

Gene sequence:

>1074_bases
ATGCAAATTGCGCGCTGGCAACCGGGGGTCGTTGCGGCCCTGGCGTCGGCCTTCCTGTTTGGTGCCGGCACACCGTTGGC
CAAATGGCTGCTGGACCAGGTCAGCCCGTGGATGCTGGCCGGGCTGCTTTACCTGGGGTCGGGCCTGGGCCTGGCTCTGT
ATCGCCGACTGCGGGGTGCCACCACACCCCGCCTTAATCCGGGTGAAGCAGGGTGGCTGGTCGCGGCGGTGGTGTGTGGC
GGTGGCATCGCCCCGGTGCTGCTGATGTGGGGCCTGTCGGCGATGCCGGCCAGCCATGCGGCCTTGCTGCTCAATGCTGA
AGCCGTGCTGACGGCGCTTCTGGCCTGGGTTGTGTTTCGCGAGAACTTCGACAAGCGCATTGCCACCGGCATGGCCGTCA
TTGTGGCGGGCGCCGTGTTGCTGAGCTGGCCTCAGCAGGGCGCACCTGGTGCACAGGTGCCAACCTCGCTGACAGCGTTG
TGGCCCGCGCTGGCGGTGACGCTGGCCTGCCTCTTCTGGGCGCTGGACAACAATTTCACGCGCAAGGTGGCGCTGGCCGA
TGCGTCGTGGATTGCCTGCGTGAAGGGCCTGGCGGCCGGCAGCACGAATTTGCTGCTGGCCTTTGTGGCGGGCGCGGCGC
TGCCCGGGCTGGCCAAGGTGTCGGTTGCCATGCTGGTCGGTTTGCTGGCCTATGGCGTCAGCCTGGCCCTCTTTGTAGTG
GGCCTGCGGCACCTGGGTGCCTCGCGCGCCGGCGCTTATTTCTCGACCGCGCCATTTGTCGGCGCGCTGTGCGCGGTGAT
TTTTCTGGGTGAGCCCGTCACCTGGCAGTTGCTCGCTGCCGCAGCCCTGATGGGCCTCGGGATCTGGCTGCACCTGACCG
AACACCATGCACATACGCACCGGCACGAGGCGCTGGAACACGAGCACCTGCATGCGCATGATGAGCACCATGCGCATGAG
CATGTGCCCGCGGTCGAAGGGCAGCATTCGCATCGTCACCGCCACGAGCCCATGACCCACAGCCATGCGCATTACCCCGA
TGCCCACCACCGTCATGACCACCGAAAGGAGTAG

Upstream 100 bases:

>100_bases
GGTTTCACTGGCCGGCGCTCTGGCACTCCGGCAAGCGGTGTCCAATGAACAAGTGTTTGAGTGTTTTTTGTTGAAGGCAC
AAGGAGTCAAGAACTTGAAA

Downstream 100 bases:

>100_bases
CGACATGCGCACTGACAGTGCGATCCCGGCACCGTACCGCATCAGCGAGGCGGCCGCCCTGAGCGGCGTGTCCGCTGCCA
ACATCCGGTTTTATGAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MQIARWQPGVVAALASAFLFGAGTPLAKWLLDQVSPWMLAGLLYLGSGLGLALYRRLRGATTPRLNPGEAGWLVAAVVCG
GGIAPVLLMWGLSAMPASHAALLLNAEAVLTALLAWVVFRENFDKRIATGMAVIVAGAVLLSWPQQGAPGAQVPTSLTAL
WPALAVTLACLFWALDNNFTRKVALADASWIACVKGLAAGSTNLLLAFVAGAALPGLAKVSVAMLVGLLAYGVSLALFVV
GLRHLGASRAGAYFSTAPFVGALCAVIFLGEPVTWQLLAAAALMGLGIWLHLTEHHAHTHRHEALEHEHLHAHDEHHAHE
HVPAVEGQHSHRHRHEPMTHSHAHYPDAHHRHDHRKE

Sequences:

>Translated_357_residues
MQIARWQPGVVAALASAFLFGAGTPLAKWLLDQVSPWMLAGLLYLGSGLGLALYRRLRGATTPRLNPGEAGWLVAAVVCG
GGIAPVLLMWGLSAMPASHAALLLNAEAVLTALLAWVVFRENFDKRIATGMAVIVAGAVLLSWPQQGAPGAQVPTSLTAL
WPALAVTLACLFWALDNNFTRKVALADASWIACVKGLAAGSTNLLLAFVAGAALPGLAKVSVAMLVGLLAYGVSLALFVV
GLRHLGASRAGAYFSTAPFVGALCAVIFLGEPVTWQLLAAAALMGLGIWLHLTEHHAHTHRHEALEHEHLHAHDEHHAHE
HVPAVEGQHSHRHRHEPMTHSHAHYPDAHHRHDHRKE
>Mature_357_residues
MQIARWQPGVVAALASAFLFGAGTPLAKWLLDQVSPWMLAGLLYLGSGLGLALYRRLRGATTPRLNPGEAGWLVAAVVCG
GGIAPVLLMWGLSAMPASHAALLLNAEAVLTALLAWVVFRENFDKRIATGMAVIVAGAVLLSWPQQGAPGAQVPTSLTAL
WPALAVTLACLFWALDNNFTRKVALADASWIACVKGLAAGSTNLLLAFVAGAALPGLAKVSVAMLVGLLAYGVSLALFVV
GLRHLGASRAGAYFSTAPFVGALCAVIFLGEPVTWQLLAAAALMGLGIWLHLTEHHAHTHRHEALEHEHLHAHDEHHAHE
HVPAVEGQHSHRHRHEPMTHSHAHYPDAHHRHDHRKE

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 38011; Mature: 38011

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIARWQPGVVAALASAFLFGAGTPLAKWLLDQVSPWMLAGLLYLGSGLGLALYRRLRGA
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCC
TTPRLNPGEAGWLVAAVVCGGGIAPVLLMWGLSAMPASHAALLLNAEAVLTALLAWVVFR
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ENFDKRIATGMAVIVAGAVLLSWPQQGAPGAQVPTSLTALWPALAVTLACLFWALDNNFT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
RKVALADASWIACVKGLAAGSTNLLLAFVAGAALPGLAKVSVAMLVGLLAYGVSLALFVV
EEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLRHLGASRAGAYFSTAPFVGALCAVIFLGEPVTWQLLAAAALMGLGIWLHLTEHHAHTH
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHH
RHEALEHEHLHAHDEHHAHEHVPAVEGQHSHRHRHEPMTHSHAHYPDAHHRHDHRKE
HHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCC
>Mature Secondary Structure
MQIARWQPGVVAALASAFLFGAGTPLAKWLLDQVSPWMLAGLLYLGSGLGLALYRRLRGA
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHCC
TTPRLNPGEAGWLVAAVVCGGGIAPVLLMWGLSAMPASHAALLLNAEAVLTALLAWVVFR
CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ENFDKRIATGMAVIVAGAVLLSWPQQGAPGAQVPTSLTALWPALAVTLACLFWALDNNFT
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCE
RKVALADASWIACVKGLAAGSTNLLLAFVAGAALPGLAKVSVAMLVGLLAYGVSLALFVV
EEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLRHLGASRAGAYFSTAPFVGALCAVIFLGEPVTWQLLAAAALMGLGIWLHLTEHHAHTH
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHHHHHH
RHEALEHEHLHAHDEHHAHEHVPAVEGQHSHRHRHEPMTHSHAHYPDAHHRHDHRKE
HHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]