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The map label for this gene is ydfH [C]

Identifier: 91789326

GI number: 91789326

Start: 3674801

End: 3675580

Strand: Direct

Name: ydfH [C]

Synonym: Bpro_3471

Alternate gene names: 91789326

Gene position: 3674801-3675580 (Clockwise)

Preceding gene: 91789325

Following gene: 91789327

Centisome position: 70.67

GC content: 63.72

Gene sequence:

>780_bases
ATGACCACGGCCTCCCACATCAGCAACCGCATCATTGAAGCCGTGATGGCGCAAAAGCTGGCGCCTGGCGCTCGCCTGGG
TGAGCAGCAGCTGGCCATACTGTTTGACTGCAGCCGCACCATCGTGCGGGAAGCCCTGACCCACCTGGCCGCGCGCGGCA
TCGTCACGGTCAGCGCGCGGCGGGGCTGGTATCTCATTGAGCCCTCCAGGGAGGAAGCGCGTGAAGCCTTCGAGGCGCGG
CGCGTGATCGAGATGGGACTGATTCGCTGCACACGCGACGTCAGCAAGTCCGCCATCAAGCAGCTCAAAAGCCACCTGAC
CCGCGAAAAAGCGGCGGTCAAGGGAGAAGACATCGGCTTGCGCAGTTTTCTGTTGGGCGACTTCCATGTGTGCCTGGCCG
AATGCCTGGGCAACAACCTGCTGGCTGACACCCTGCGCGACTTCACCGCACGCACCACCCTGATCGCCATGCTGTACCAG
TCCTCGCACGATGCGGCCCAGTCCTGCGAGGAGCATGTGCGCATTGTGCAGGCCCTTGAAAAAGGCGACCTCGTGCTGGC
CGAACAACTCATGCAGGCGCATATCGGCAGCGTGCAGGCGGGCCTGCAGCTACAGGCTGCGGGCGGCGATCCGCTGGCGC
ACCTGCGCAGCGCGCTGAGCCCGCTTTCGCCCGCAAAGGCCAGATCGGCACAAGAGTTGCATACAAGTGTTCGCAAAACC
GGCCGGCGCCCGGCCAAACCCCCTGAAGAATCCTCAACCTATCTAGGAGCCCTGCTATGA

Upstream 100 bases:

>100_bases
CAGTTTGATGCACCAGCACACCACACAGGTGCACATATCTTGTATACCAGCCAGTTAAACCAGTCCAGAACCCTGGCACG
GGATATGCACTGCTTCCTGC

Downstream 100 bases:

>100_bases
AGTTACCCCAACTCTCCAAACGCCTGTTTTCCCTGAGCATGATGTCGGCCGCCTTGCTGGTGGCAGCGGGCGTGCAGGCA
CAAACGGCGCTGGACGACGT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Transcriptional Regulator Protein GntR Family; GntR Family Regulatory Protein; Transcriptional Regulator Gntr Family; Transcriptional Regulator Protein; GntR Family Transcription Regulator Protein; GntR-Family Transcriptional Regulator; GntR Domain-Containing Protein; Bacterial Regulatory Protein; Transcription Regulator Protein; FCD Domain Protein; Transcriptional Regulator GntR Family Protein; TRANSCRIPTIONal REGULATOR GntR Family

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MTTASHISNRIIEAVMAQKLAPGARLGEQQLAILFDCSRTIVREALTHLAARGIVTVSARRGWYLIEPSREEAREAFEAR
RVIEMGLIRCTRDVSKSAIKQLKSHLTREKAAVKGEDIGLRSFLLGDFHVCLAECLGNNLLADTLRDFTARTTLIAMLYQ
SSHDAAQSCEEHVRIVQALEKGDLVLAEQLMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARSAQELHTSVRKT
GRRPAKPPEESSTYLGALL

Sequences:

>Translated_259_residues
MTTASHISNRIIEAVMAQKLAPGARLGEQQLAILFDCSRTIVREALTHLAARGIVTVSARRGWYLIEPSREEAREAFEAR
RVIEMGLIRCTRDVSKSAIKQLKSHLTREKAAVKGEDIGLRSFLLGDFHVCLAECLGNNLLADTLRDFTARTTLIAMLYQ
SSHDAAQSCEEHVRIVQALEKGDLVLAEQLMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARSAQELHTSVRKT
GRRPAKPPEESSTYLGALL
>Mature_258_residues
TTASHISNRIIEAVMAQKLAPGARLGEQQLAILFDCSRTIVREALTHLAARGIVTVSARRGWYLIEPSREEAREAFEARR
VIEMGLIRCTRDVSKSAIKQLKSHLTREKAAVKGEDIGLRSFLLGDFHVCLAECLGNNLLADTLRDFTARTTLIAMLYQS
SHDAAQSCEEHVRIVQALEKGDLVLAEQLMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARSAQELHTSVRKTG
RRPAKPPEESSTYLGALL

Specific function: Unknown

COG id: COG1802

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787821, Length=197, Percent_Identity=25.8883248730964, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28262; Mature: 28131

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTASHISNRIIEAVMAQKLAPGARLGEQQLAILFDCSRTIVREALTHLAARGIVTVSAR
CCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
RGWYLIEPSREEAREAFEARRVIEMGLIRCTRDVSKSAIKQLKSHLTREKAAVKGEDIGL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RSFLLGDFHVCLAECLGNNLLADTLRDFTARTTLIAMLYQSSHDAAQSCEEHVRIVQALE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KGDLVLAEQLMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARSAQELHTSVRKT
HCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GRRPAKPPEESSTYLGALL
CCCCCCCCCCCCCHHHHCC
>Mature Secondary Structure 
TTASHISNRIIEAVMAQKLAPGARLGEQQLAILFDCSRTIVREALTHLAARGIVTVSAR
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
RGWYLIEPSREEAREAFEARRVIEMGLIRCTRDVSKSAIKQLKSHLTREKAAVKGEDIGL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
RSFLLGDFHVCLAECLGNNLLADTLRDFTARTTLIAMLYQSSHDAAQSCEEHVRIVQALE
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KGDLVLAEQLMQAHIGSVQAGLQLQAAGGDPLAHLRSALSPLSPAKARSAQELHTSVRKT
HCCHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
GRRPAKPPEESSTYLGALL
CCCCCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA