Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91789325

Identifier: 91789325

GI number: 91789325

Start: 3673433

End: 3674425

Strand: Direct

Name: 91789325

Synonym: Bpro_3470

Alternate gene names: NA

Gene position: 3673433-3674425 (Clockwise)

Preceding gene: 91789323

Following gene: 91789326

Centisome position: 70.64

GC content: 65.96

Gene sequence:

>993_bases
ATGAGCCACCTTTCCCTGCCCACCGTTTTGTTGAAGCTGCCCCGCACCTTGATGACGACGCTGCTGCTGCTCGCCAGCGC
CGCGGCGTTCGCCGCATTTCCCGACAAGCCGATTCGCGTGGTGATCGGATTCCCGGCAGGCGGCCCCCTTGACCAGCATG
CGCGACTGCTGACCGAGCGGCTGCAGGCGGTGCTGGGCCAGCCCATCGTGATTGACTACAAGTCGGGCGCCGGCGGTACG
GTGGGCGCCCAGGACGTGATGAAGGCAGCGCCGGACGGCTACACGCTGATGCTCGCCAACACCGGCGTGATGGTCATCAA
CCCGGCCCTGTACACCCGCCTGCCCTACAGCACCCTGAGGGACTTCACGCCGATTGCGCGTACCGCCATGCAGCCGCTGG
CGCTGCTGGTGAACCCCAAACTGCCGGTTAACACGCTGCGGGAGTTTGTGGACTACACACGCGCGCGGCCCGGCCAGGTC
AACTACGGCTCTGCCGGCAACGGCGGCATCAGCCACCTGGTGCCCGAAATGTTCAAGAACGCCACCGGGCTCTTCATGGT
TCACATTCCCTATCGCGGCAGCGCACCGGCCTTCACCGACCTGATGGCCGGGCAGGTACAGTTCATGGGCGAGTCCATCC
CCCAGGCGGCCAACTACCACAAGCAAGGCAAGGTGCGGGCGCTGGCCGTCACCAGCCGTGAGCGCAACCCCGCCCTGCCC
GAGGTGCCCACCGTCATCGAATCAGGCTTCAAGGGTTTTGAGGTGGTGGGCTTTTACGGCTTCCTGGCGCCTGCCGGCCT
GCCCAAGGACATCACGGCCAAATTGAGCGACGCGTTCAAACAGGTGATGAACAGCCCGGACATCCGCAGCCGCATGGTGA
CGCAGGGCGCCGACCCGGCCTTCATGGGCAGCGACGAATTCGCCCAGTTCCTGGCAGCCGAAATGCCGCGCTGGGCCCAG
GCGGTCAAGGCCTCGGGCGCGAAGCTCGACTGA

Upstream 100 bases:

>100_bases
CATTGACAACCATTTCATCACCCGTCCCTGTCACCTAATGGCCAATGAGCCAATGGCGCGCAACGTCCCGCATTGCCTTG
CACACAAAAACAGGAACACC

Downstream 100 bases:

>100_bases
CCCGCCGCGAGAGAAGAAGGACGAAGAGGAGCGCGATCACCGCGCGGGCGATGCCTTGGCGCGACGCTTCGCTCCACCCG
GCCAGCAAATCGGGCAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 329

Protein sequence:

>330_residues
MSHLSLPTVLLKLPRTLMTTLLLLASAAAFAAFPDKPIRVVIGFPAGGPLDQHARLLTERLQAVLGQPIVIDYKSGAGGT
VGAQDVMKAAPDGYTLMLANTGVMVINPALYTRLPYSTLRDFTPIARTAMQPLALLVNPKLPVNTLREFVDYTRARPGQV
NYGSAGNGGISHLVPEMFKNATGLFMVHIPYRGSAPAFTDLMAGQVQFMGESIPQAANYHKQGKVRALAVTSRERNPALP
EVPTVIESGFKGFEVVGFYGFLAPAGLPKDITAKLSDAFKQVMNSPDIRSRMVTQGADPAFMGSDEFAQFLAAEMPRWAQ
AVKASGAKLD

Sequences:

>Translated_330_residues
MSHLSLPTVLLKLPRTLMTTLLLLASAAAFAAFPDKPIRVVIGFPAGGPLDQHARLLTERLQAVLGQPIVIDYKSGAGGT
VGAQDVMKAAPDGYTLMLANTGVMVINPALYTRLPYSTLRDFTPIARTAMQPLALLVNPKLPVNTLREFVDYTRARPGQV
NYGSAGNGGISHLVPEMFKNATGLFMVHIPYRGSAPAFTDLMAGQVQFMGESIPQAANYHKQGKVRALAVTSRERNPALP
EVPTVIESGFKGFEVVGFYGFLAPAGLPKDITAKLSDAFKQVMNSPDIRSRMVTQGADPAFMGSDEFAQFLAAEMPRWAQ
AVKASGAKLD
>Mature_329_residues
SHLSLPTVLLKLPRTLMTTLLLLASAAAFAAFPDKPIRVVIGFPAGGPLDQHARLLTERLQAVLGQPIVIDYKSGAGGTV
GAQDVMKAAPDGYTLMLANTGVMVINPALYTRLPYSTLRDFTPIARTAMQPLALLVNPKLPVNTLREFVDYTRARPGQVN
YGSAGNGGISHLVPEMFKNATGLFMVHIPYRGSAPAFTDLMAGQVQFMGESIPQAANYHKQGKVRALAVTSRERNPALPE
VPTVIESGFKGFEVVGFYGFLAPAGLPKDITAKLSDAFKQVMNSPDIRSRMVTQGADPAFMGSDEFAQFLAAEMPRWAQA
VKASGAKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 35402; Mature: 35270

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLSLPTVLLKLPRTLMTTLLLLASAAAFAAFPDKPIRVVIGFPAGGPLDQHARLLTER
CCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHH
LQAVLGQPIVIDYKSGAGGTVGAQDVMKAAPDGYTLMLANTGVMVINPALYTRLPYSTLR
HHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEECHHHHHHCCHHHHH
DFTPIARTAMQPLALLVNPKLPVNTLREFVDYTRARPGQVNYGSAGNGGISHLVPEMFKN
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
ATGLFMVHIPYRGSAPAFTDLMAGQVQFMGESIPQAANYHKQGKVRALAVTSRERNPALP
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEECCCCCCCCC
EVPTVIESGFKGFEVVGFYGFLAPAGLPKDITAKLSDAFKQVMNSPDIRSRMVTQGADPA
CHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
FMGSDEFAQFLAAEMPRWAQAVKASGAKLD
CCCCHHHHHHHHHHCHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SHLSLPTVLLKLPRTLMTTLLLLASAAAFAAFPDKPIRVVIGFPAGGPLDQHARLLTER
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHH
LQAVLGQPIVIDYKSGAGGTVGAQDVMKAAPDGYTLMLANTGVMVINPALYTRLPYSTLR
HHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECCCEEEECHHHHHHCCHHHHH
DFTPIARTAMQPLALLVNPKLPVNTLREFVDYTRARPGQVNYGSAGNGGISHLVPEMFKN
HHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
ATGLFMVHIPYRGSAPAFTDLMAGQVQFMGESIPQAANYHKQGKVRALAVTSRERNPALP
CCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCEEEEEEECCCCCCCCC
EVPTVIESGFKGFEVVGFYGFLAPAGLPKDITAKLSDAFKQVMNSPDIRSRMVTQGADPA
CHHHHHHCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCC
FMGSDEFAQFLAAEMPRWAQAVKASGAKLD
CCCCHHHHHHHHHHCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]