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The map label for this gene is gbpR [H]

Identifier: 91789294

GI number: 91789294

Start: 3639615

End: 3640550

Strand: Reverse

Name: gbpR [H]

Synonym: Bpro_3439

Alternate gene names: 91789294

Gene position: 3640550-3639615 (Counterclockwise)

Preceding gene: 91789297

Following gene: 91789290

Centisome position: 70.01

GC content: 64.21

Gene sequence:

>936_bases
ATGAGCGAGCATGTGAAACCTCAGGGGCTGAGCCAAGAGTGGTACTTGCGCGGTCGCCTGCGGCTGCGGCACCTGAAGCT
GGTGAAGGTGCTGGACGAGACCCGCAATATCGGTGAAGCGGCCCAGCGCATGGCGACCACGCAGCCGGCCATTTCAAAAA
TGCTGGGCGAGCTTGAGAGCATTGTTCAGGTGCAGCTCTTCACCCGGACCTCCAAAGGCACCTTTCCCACCCCGCATGGC
GAGTCACTGATACGCCACGCGCGCTGGATCCTGGGCGACCTCGACCGGGCCGGCCTGGAATGGTTTGCCCCGCCGGAAAA
GCAGAAGGCGCGCGTGGTGCTGGGGGTGAATTCCTCATCCGCTGCCTTCCTGGTGCCCCGCGCCTTGTTGAAGCTGCAGG
CGCGCGGCGATGCGGTGTCTGTGGTGGTGCGGGAGGGCTCGATGGAGGCCCTGATGCCGCAGTTGCTGACCCGGCAGATT
GACCTGATCGTGGCGCGCCTCGGCGAAGCCACGCAGCAGCGCGGCCTGTTGAGCGAGGTGCTCAGTCAGGAGTCCATGTG
CGTGGTGTGCTCCAACGCGCACCCGCTGGCCTCGATGAAGCGCTGCAACTGGGCGGCCCTGTCGCGCTACCCCTGGATAC
TGCCGCCGCACGGCAGCCCGGTGCGCGCTGCGCTGGACATCATCCTGCTGCGCGAAGGCGTGACGCTGCAGAGTCATGTC
GAATCCGCTTCAGTGATAACGAACATGGTGCTCATGGATAACAGCCAGGCGCTGGCCCTGCTTCCGCAGAACGTCGCCGA
CTACCACCGTGATCGCCGCGCGCTCACCATACTGAATATCAGCTTGCCTGATGTCTTCGGCCCGCTGGGCATAGTCCGCC
ACAGTCACCTGGAGATTTCGGAGGGCATACAGGCCGTCATCGACTGTCTGCGTTGA

Upstream 100 bases:

>100_bases
TGTAGCGTATGGGCCGGTCTTTTGGGTGAAAACCCCATGGTAGGGAACGCCTGCATGCCTGTCTAATGATGAATTTGAGC
GGCTATATTGCAAAGTTGAT

Downstream 100 bases:

>100_bases
AGTGTGTGTGCGGCCGCTAAGCCAGCCAGTCTTTCAACTGCCCGAAAAGCCATGCGCTGTCGTCATGCGGCAGGTCATGC
CCGGCCCATGGGTGCTGCAC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Galactose-binding protein regulator; GBP regulator [H]

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSEHVKPQGLSQEWYLRGRLRLRHLKLVKVLDETRNIGEAAQRMATTQPAISKMLGELESIVQVQLFTRTSKGTFPTPHG
ESLIRHARWILGDLDRAGLEWFAPPEKQKARVVLGVNSSSAAFLVPRALLKLQARGDAVSVVVREGSMEALMPQLLTRQI
DLIVARLGEATQQRGLLSEVLSQESMCVVCSNAHPLASMKRCNWAALSRYPWILPPHGSPVRAALDIILLREGVTLQSHV
ESASVITNMVLMDNSQALALLPQNVADYHRDRRALTILNISLPDVFGPLGIVRHSHLEISEGIQAVIDCLR

Sequences:

>Translated_311_residues
MSEHVKPQGLSQEWYLRGRLRLRHLKLVKVLDETRNIGEAAQRMATTQPAISKMLGELESIVQVQLFTRTSKGTFPTPHG
ESLIRHARWILGDLDRAGLEWFAPPEKQKARVVLGVNSSSAAFLVPRALLKLQARGDAVSVVVREGSMEALMPQLLTRQI
DLIVARLGEATQQRGLLSEVLSQESMCVVCSNAHPLASMKRCNWAALSRYPWILPPHGSPVRAALDIILLREGVTLQSHV
ESASVITNMVLMDNSQALALLPQNVADYHRDRRALTILNISLPDVFGPLGIVRHSHLEISEGIQAVIDCLR
>Mature_310_residues
SEHVKPQGLSQEWYLRGRLRLRHLKLVKVLDETRNIGEAAQRMATTQPAISKMLGELESIVQVQLFTRTSKGTFPTPHGE
SLIRHARWILGDLDRAGLEWFAPPEKQKARVVLGVNSSSAAFLVPRALLKLQARGDAVSVVVREGSMEALMPQLLTRQID
LIVARLGEATQQRGLLSEVLSQESMCVVCSNAHPLASMKRCNWAALSRYPWILPPHGSPVRAALDIILLREGVTLQSHVE
SASVITNMVLMDNSQALALLPQNVADYHRDRRALTILNISLPDVFGPLGIVRHSHLEISEGIQAVIDCLR

Specific function: Does not seem to be required for sbpA expression [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081904, Length=296, Percent_Identity=25, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1787601, Length=233, Percent_Identity=27.4678111587983, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1789506, Length=257, Percent_Identity=21.4007782101167, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787530, Length=222, Percent_Identity=25.6756756756757, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1788297, Length=249, Percent_Identity=26.5060240963855, Blast_Score=68, Evalue=9e-13,
Organism=Escherichia coli, GI145693105, Length=272, Percent_Identity=22.4264705882353, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 34477; Mature: 34345

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHVKPQGLSQEWYLRGRLRLRHLKLVKVLDETRNIGEAAQRMATTQPAISKMLGELES
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHH
IVQVQLFTRTSKGTFPTPHGESLIRHARWILGDLDRAGLEWFAPPEKQKARVVLGVNSSS
HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
AAFLVPRALLKLQARGDAVSVVVREGSMEALMPQLLTRQIDLIVARLGEATQQRGLLSEV
CHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQESMCVVCSNAHPLASMKRCNWAALSRYPWILPPHGSPVRAALDIILLREGVTLQSHV
HCCCCEEEEECCCCCHHHHHHCCHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHH
ESASVITNMVLMDNSQALALLPQNVADYHRDRRALTILNISLPDVFGPLGIVRHSHLEIS
HHHHHHHHHHEECCCCEEEECCHHHHHHHCCCCEEEEEEECCCHHHCCHHHHHCCCCCHH
EGIQAVIDCLR
HHHHHHHHHHC
>Mature Secondary Structure 
SEHVKPQGLSQEWYLRGRLRLRHLKLVKVLDETRNIGEAAQRMATTQPAISKMLGELES
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCHHHHHHHHHHHH
IVQVQLFTRTSKGTFPTPHGESLIRHARWILGDLDRAGLEWFAPPEKQKARVVLGVNSSS
HHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCC
AAFLVPRALLKLQARGDAVSVVVREGSMEALMPQLLTRQIDLIVARLGEATQQRGLLSEV
CHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSQESMCVVCSNAHPLASMKRCNWAALSRYPWILPPHGSPVRAALDIILLREGVTLQSHV
HCCCCEEEEECCCCCHHHHHHCCHHHHCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHH
ESASVITNMVLMDNSQALALLPQNVADYHRDRRALTILNISLPDVFGPLGIVRHSHLEIS
HHHHHHHHHHEECCCCEEEECCHHHHHHHCCCCEEEEEEECCCHHHCCHHHHHCCCCCHH
EGIQAVIDCLR
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10361275 [H]