| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yhjX [C]
Identifier: 91789250
GI number: 91789250
Start: 3591896
End: 3593104
Strand: Reverse
Name: yhjX [C]
Synonym: Bpro_3395
Alternate gene names: 91789250
Gene position: 3593104-3591896 (Counterclockwise)
Preceding gene: 91789251
Following gene: 91789249
Centisome position: 69.09
GC content: 64.43
Gene sequence:
>1209_bases ATGCAGTTTCTTGTTTTCCTGCGCGACAACGCCCGCTGGCTGGGCGGCGGGTTCCTGCTTTTTTTCTTCTCCTCGTTTGG GCAGACATTCCTGATTTCGCTGTCGGCCGGTGACATCCGCCTTGAGTACGGACTCTCCCACGGCGGGTTTGGCTCGCTCT ACATGGCAGCCACCCTGGCCAGTGCCTTCACGCTGCCGCGACTGGGCCACCTGGCAGACCACCACAGCGCGAAAAAGCTG GCGCTGGTCATGCTGCCCATGCTGGCGCTGGCGGCCGCCGGCATGGCGCTGTCGCACCACGTTGTCACGCTCTTTGTGAC CATTTACCTGCTGCGCCTGTTGGGCCAGGGCATGATGTCCCACCTCGCGTTCACCACCATGGCGCGCTGGTTTTCCGCGC AGCGGGGCCGGGCGATCTCGCTCGCCACGCTGGGCCTGAACACCGGCGAGGCAGTGTTGCCGCTGGCGTTTGTGGCGCTG GCCGCGTCGCTGGGCTGGCGCAACACCTGGTGGCTGGCCGCCGGTGCCTTGGTGCTGGTGGCGTTGCCCCTCATCGCTAC TCTGGTTTCAGTCGAGCGCGCCCCGAAGGCCTCTGACCCCGTGGCCCGCGTGACAACGGCGCGTGACTGGAGCCGGTCCG AAGTGCTGCGCGACCCGCTGTTTTATGCGGTGATGCTGGCCATGGTGCCGCCGGCCTTTATCGGTAACACCATTTTTTTT CACCAGGTCTACCTGGTCGAGTTGCGCGGCTGGTCGCTCACAGCGTTTGCTTCTTCCTTCACGCTGTATGCGCTGATGAC GATTGCCTTCACGCTGATCTCGGGCCAGCTGATAGACCGTGTGGGGGGCCTGAGGCTGTTGCCTTTTTACCTGCTGCCGC TGGGGCTGGCGCTGCTGCTGCTGGGGTCTGTGCAAGCCGCCTGGAGCATGTTCGCCTTCATGGCGCTGTACGGTGTGTCC AACGGCTTTTCCCTTTCGCTCTACGGCTCGCTGTGGCCCGAGCTTTATGGCCTGCGGAATCTGGGCGCCATCCGTGCCGT GATCCTTTCCATGCTGGTGTTTGCCTCGGCCGCAGGTCCGGGGCTGGGCGGGCTGCTGATTGACGCGGGCGTCAGCTATC CGGCGCTGATTGTCGGGCTGGGCGTTTATTGCGTGGTCATTTCCATGGTGATGCTGCGGGTGACACGCCGGCTGAGGGCG CGGGCCTGA
Upstream 100 bases:
>100_bases CGCTTCAAGAAGATTCCACGGCCGCAGAAACCCCGCACGCCGCGGCTACCGGATCCCGACGAGCCGGCAACGCCGTAAGC GGCAGCCAGCAACGCGGCCG
Downstream 100 bases:
>100_bases AGTTCGGCAAGGTCCGGAAAGCGCAGGTCATGGCGAACGGGTTTTTGCAGATTGAAGCCGGTCAGGCAGTCATGGAACAA ACCCGACGCATCGCGCAAGC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; Facilitator Superfamily Permease; Facilitator Superfamily Permease Protein; Facilitator Family Transporter
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MQFLVFLRDNARWLGGGFLLFFFSSFGQTFLISLSAGDIRLEYGLSHGGFGSLYMAATLASAFTLPRLGHLADHHSAKKL ALVMLPMLALAAAGMALSHHVVTLFVTIYLLRLLGQGMMSHLAFTTMARWFSAQRGRAISLATLGLNTGEAVLPLAFVAL AASLGWRNTWWLAAGALVLVALPLIATLVSVERAPKASDPVARVTTARDWSRSEVLRDPLFYAVMLAMVPPAFIGNTIFF HQVYLVELRGWSLTAFASSFTLYALMTIAFTLISGQLIDRVGGLRLLPFYLLPLGLALLLLGSVQAAWSMFAFMALYGVS NGFSLSLYGSLWPELYGLRNLGAIRAVILSMLVFASAAGPGLGGLLIDAGVSYPALIVGLGVYCVVISMVMLRVTRRLRA RA
Sequences:
>Translated_402_residues MQFLVFLRDNARWLGGGFLLFFFSSFGQTFLISLSAGDIRLEYGLSHGGFGSLYMAATLASAFTLPRLGHLADHHSAKKL ALVMLPMLALAAAGMALSHHVVTLFVTIYLLRLLGQGMMSHLAFTTMARWFSAQRGRAISLATLGLNTGEAVLPLAFVAL AASLGWRNTWWLAAGALVLVALPLIATLVSVERAPKASDPVARVTTARDWSRSEVLRDPLFYAVMLAMVPPAFIGNTIFF HQVYLVELRGWSLTAFASSFTLYALMTIAFTLISGQLIDRVGGLRLLPFYLLPLGLALLLLGSVQAAWSMFAFMALYGVS NGFSLSLYGSLWPELYGLRNLGAIRAVILSMLVFASAAGPGLGGLLIDAGVSYPALIVGLGVYCVVISMVMLRVTRRLRA RA >Mature_402_residues MQFLVFLRDNARWLGGGFLLFFFSSFGQTFLISLSAGDIRLEYGLSHGGFGSLYMAATLASAFTLPRLGHLADHHSAKKL ALVMLPMLALAAAGMALSHHVVTLFVTIYLLRLLGQGMMSHLAFTTMARWFSAQRGRAISLATLGLNTGEAVLPLAFVAL AASLGWRNTWWLAAGALVLVALPLIATLVSVERAPKASDPVARVTTARDWSRSEVLRDPLFYAVMLAMVPPAFIGNTIFF HQVYLVELRGWSLTAFASSFTLYALMTIAFTLISGQLIDRVGGLRLLPFYLLPLGLALLLLGSVQAAWSMFAFMALYGVS NGFSLSLYGSLWPELYGLRNLGAIRAVILSMLVFASAAGPGLGGLLIDAGVSYPALIVGLGVYCVVISMVMLRVTRRLRA RA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43389; Mature: 43389
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFLVFLRDNARWLGGGFLLFFFSSFGQTFLISLSAGDIRLEYGLSHGGFGSLYMAATLA CCEEEEEECCCEEHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH SAFTLPRLGHLADHHSAKKLALVMLPMLALAAAGMALSHHVVTLFVTIYLLRLLGQGMMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAFTTMARWFSAQRGRAISLATLGLNTGEAVLPLAFVALAASLGWRNTWWLAAGALVLV HHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALPLIATLVSVERAPKASDPVARVTTARDWSRSEVLRDPLFYAVMLAMVPPAFIGNTIFF HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH HQVYLVELRGWSLTAFASSFTLYALMTIAFTLISGQLIDRVGGLRLLPFYLLPLGLALLL HHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LGSVQAAWSMFAFMALYGVSNGFSLSLYGSLWPELYGLRNLGAIRAVILSMLVFASAAGP HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLGGLLIDAGVSYPALIVGLGVYCVVISMVMLRVTRRLRARA CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQFLVFLRDNARWLGGGFLLFFFSSFGQTFLISLSAGDIRLEYGLSHGGFGSLYMAATLA CCEEEEEECCCEEHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHHH SAFTLPRLGHLADHHSAKKLALVMLPMLALAAAGMALSHHVVTLFVTIYLLRLLGQGMMS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HLAFTTMARWFSAQRGRAISLATLGLNTGEAVLPLAFVALAASLGWRNTWWLAAGALVLV HHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH ALPLIATLVSVERAPKASDPVARVTTARDWSRSEVLRDPLFYAVMLAMVPPAFIGNTIFF HHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCHHHH HQVYLVELRGWSLTAFASSFTLYALMTIAFTLISGQLIDRVGGLRLLPFYLLPLGLALLL HHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LGSVQAAWSMFAFMALYGVSNGFSLSLYGSLWPELYGLRNLGAIRAVILSMLVFASAAGP HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLGGLLIDAGVSYPALIVGLGVYCVVISMVMLRVTRRLRARA CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA