| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cutL [H]
Identifier: 91789249
GI number: 91789249
Start: 3589334
End: 3591682
Strand: Reverse
Name: cutL [H]
Synonym: Bpro_3394
Alternate gene names: 91789249
Gene position: 3591682-3589334 (Counterclockwise)
Preceding gene: 91789250
Following gene: 91789247
Centisome position: 69.07
GC content: 66.96
Gene sequence:
>2349_bases ATGACTGAAACCCAACCCGCTCAGATCAACCCGTCACGCTTCGGCAGCGGACAATCCGTTCGCCGCCTGGAAGACGATGC GCTGCTGGCCGGGGCCGGCCAGTACACGGACGACTTGACCCTGCCGGGCCAGACCCAGCTCTTTTTTGTGCGCTCACCCT ATCCCCACGCCCGCATCGTGTCGCTGGACACCGCGGCAGCGCTGGCCATGCCAGGCGTGCTGCAGGTGGTCACTGGGGCC GATCTGGTGGCGGCCGGGGTCAAGCCGATTCCCGGTGCCAGCGGCTTTACGCGCGCCGACGGCTCGCCCTGCGCCGCGCC ACCACGGCGCGCGCTGGCCCACGAGCGCGTGCGTTTTGTCGGCGAGGCGGTGGCCGCCGTGGTGGCGCAGACACTGCAGC AAGCCCGCGACGCGGCGGAAGCCATTGCCGTCGACTATGAAGAGCTGCCCATGGTCGTGGACATGAACGACGCGATGGCT CCCGGCGCCCCGGTGCTCTGCCCCGAAGCACCGGATAACATTGCCGCCGAAACGCGCTACGGCAATGCCGAAGCCACCGC CGCAGCCTTTGCCAGCGCCCACCACGTGGTGGCGCTGGACCTGGTCAATCAGCGGCTGGCTCCGCTGAGCCTGGAGCCGC GCTCGGTGCTGGCCGCTTTTGACACCACTTCGCAGCGACTGACCATCCGCATGAGCACCCAAATGCCTTCCGGCGTGCGC GACTCGGTGTGCGACGCGCTGGGCATGGCGAAGGAGCAGCTGCGCGTGGTGGTGGGCGATGTGGGTGGCGGTTTCGGCAT GAAAACCGGGGTCTACCCGGAAGATGTCGCCGTTGCCTTTTGCGCCCGCGCGCTGCAGCGCCCGGTGAAATGGGTGGCCG ACCGCAGTGAAGAATTTGTATCGAGCACACACGGCCGTGACCTGCAAAGCCACGCCGAACTGGCGCTCGACGAACACGGC AAGATACTGGGCCTGCGCCTGGCCTCGCTGGCCAATGTGGGCGCGTATGCCACCGGCGCGGGCGTGGTCATCCAGTTGAT GATCGGCCCCTGGGTGCAGACCAGTGTGTATGACATCCAGACCATCGACTTTCATTTCAGGGCCGTGCTGACGAACACCG CGCCCACCAGCGCCTACCGGGGTGCGGGCCGCCCTGAAGCCATCTTCACGATCGAGCGGCTGATGGACGAAGCCGCCCGC CAGACCGGCATCGACCGGATCGAGCTGCGCCGCCGCAACTTTATCCAGCCCACGCAAATGCCCTACAAAAACCCCATGGG CCAGACCTACGACACGGGCCGCTTCGAGTCGGTGATGGACCAGGCGCTGGTGCTGGCCGACTGGCAGGGTTTTGATGCAC GTGCCGCCGAGTCGGCACGCCGCGGTCTGCTGCGCGGCCTGGGCATCGCGACCTTCCTGGAATGGACCGGCGGCAATGCG CTGGAAGAAAGCGTCACTGTGGAGATCAAGGCCCCCACATCAGGCACCGACGGCATCATTGAAGTTTTCTCGGCCGTCAA CGCCATGGGGCAGGGCATTGCCACCTCGCTGGCGCAACTGGTGGTCGATGCGTTTGGCGTGCCGATGGACAAGGTCCGCA TCGTGCTGGGCGATACCGACCGCGGCAATGGTTTTGGCAGCGCTGGTTCGCGCTCGCTGTTCACCGGTGGCTCGGCTGTA CGCATAGGCGCCGAGCGCACCATCGACAAAGCCCGGCAACTGGCGGCCAAGGAGTTTGAGGCGGCCGAGCAGGACATCAC GTACGCCGACGGCAGCTTCAAGGTGGCGGGTACCGACCTGAGCATCGATTTGTTTGCGCTCGCGGCGCGTCAGAGCGACC AGCGCATCTTCATGGACTCGACCACCGCCGTGGCCGGGCCGTCCTGGCCCAATGGCTGCCACATCTGCGAGGTCGAGGTC GACCCGCAGACTGGCCACGTGGCGGTGGTGGCCTATGCGTCCGTCAACGACGTGGGCCGCGTCGTCAACCCGATGATCGT GCGCGGCCAGCTCGACGGCGGAGCCGTGCAGGGCATAGGCCAGGCGCTGTGCGAGCACCTGGTGTATGACCGTGAAACCG GCCAGCCCCTGACGGGCAGCCTGATGGACTACGCCGCCCCGCGCGCTGACAATGCGCCCGACTTCAAAACCGAACTGGAC CCCTCCACTCCCTGCCTGAACAACCCGCTGGGCGTCAAAGGCGTGGGCGAACTGGGCACCATAGGCGCCGGGCCCACGGT GGTCAATGCCGTGGCCGACGCGCTGGCACGCCGCGGCATGGCGGCGCAGGCCCGTCAGTTGCAGATGCCGCTGTCACCCT CCCGGCTCTGGCATTTGATGCAGGGCTGA
Upstream 100 bases:
>100_bases TTGCTGAGCCGCACTGATGCCCTTATAGTGGCTTCTCACCGTTTTCGCGCCCGCATACCGCCCTGGCAGATGCGAGGCCG CCATTCAGGGGCATTCTTTG
Downstream 100 bases:
>100_bases GGTTCATCAATTTCTCCGGCTTTACGAAGGCAGGCGGCTTTCATCGCCGGCATCCGGCTCGGCGCAGCGCTTCAGGATTT CCGCGCGCGCGGCGTCGCGC
Product: xanthine dehydrogenase, molybdenum-binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 782; Mature: 781
Protein sequence:
>782_residues MTETQPAQINPSRFGSGQSVRRLEDDALLAGAGQYTDDLTLPGQTQLFFVRSPYPHARIVSLDTAAALAMPGVLQVVTGA DLVAAGVKPIPGASGFTRADGSPCAAPPRRALAHERVRFVGEAVAAVVAQTLQQARDAAEAIAVDYEELPMVVDMNDAMA PGAPVLCPEAPDNIAAETRYGNAEATAAAFASAHHVVALDLVNQRLAPLSLEPRSVLAAFDTTSQRLTIRMSTQMPSGVR DSVCDALGMAKEQLRVVVGDVGGGFGMKTGVYPEDVAVAFCARALQRPVKWVADRSEEFVSSTHGRDLQSHAELALDEHG KILGLRLASLANVGAYATGAGVVIQLMIGPWVQTSVYDIQTIDFHFRAVLTNTAPTSAYRGAGRPEAIFTIERLMDEAAR QTGIDRIELRRRNFIQPTQMPYKNPMGQTYDTGRFESVMDQALVLADWQGFDARAAESARRGLLRGLGIATFLEWTGGNA LEESVTVEIKAPTSGTDGIIEVFSAVNAMGQGIATSLAQLVVDAFGVPMDKVRIVLGDTDRGNGFGSAGSRSLFTGGSAV RIGAERTIDKARQLAAKEFEAAEQDITYADGSFKVAGTDLSIDLFALAARQSDQRIFMDSTTAVAGPSWPNGCHICEVEV DPQTGHVAVVAYASVNDVGRVVNPMIVRGQLDGGAVQGIGQALCEHLVYDRETGQPLTGSLMDYAAPRADNAPDFKTELD PSTPCLNNPLGVKGVGELGTIGAGPTVVNAVADALARRGMAAQARQLQMPLSPSRLWHLMQG
Sequences:
>Translated_782_residues MTETQPAQINPSRFGSGQSVRRLEDDALLAGAGQYTDDLTLPGQTQLFFVRSPYPHARIVSLDTAAALAMPGVLQVVTGA DLVAAGVKPIPGASGFTRADGSPCAAPPRRALAHERVRFVGEAVAAVVAQTLQQARDAAEAIAVDYEELPMVVDMNDAMA PGAPVLCPEAPDNIAAETRYGNAEATAAAFASAHHVVALDLVNQRLAPLSLEPRSVLAAFDTTSQRLTIRMSTQMPSGVR DSVCDALGMAKEQLRVVVGDVGGGFGMKTGVYPEDVAVAFCARALQRPVKWVADRSEEFVSSTHGRDLQSHAELALDEHG KILGLRLASLANVGAYATGAGVVIQLMIGPWVQTSVYDIQTIDFHFRAVLTNTAPTSAYRGAGRPEAIFTIERLMDEAAR QTGIDRIELRRRNFIQPTQMPYKNPMGQTYDTGRFESVMDQALVLADWQGFDARAAESARRGLLRGLGIATFLEWTGGNA LEESVTVEIKAPTSGTDGIIEVFSAVNAMGQGIATSLAQLVVDAFGVPMDKVRIVLGDTDRGNGFGSAGSRSLFTGGSAV RIGAERTIDKARQLAAKEFEAAEQDITYADGSFKVAGTDLSIDLFALAARQSDQRIFMDSTTAVAGPSWPNGCHICEVEV DPQTGHVAVVAYASVNDVGRVVNPMIVRGQLDGGAVQGIGQALCEHLVYDRETGQPLTGSLMDYAAPRADNAPDFKTELD PSTPCLNNPLGVKGVGELGTIGAGPTVVNAVADALARRGMAAQARQLQMPLSPSRLWHLMQG >Mature_781_residues TETQPAQINPSRFGSGQSVRRLEDDALLAGAGQYTDDLTLPGQTQLFFVRSPYPHARIVSLDTAAALAMPGVLQVVTGAD LVAAGVKPIPGASGFTRADGSPCAAPPRRALAHERVRFVGEAVAAVVAQTLQQARDAAEAIAVDYEELPMVVDMNDAMAP GAPVLCPEAPDNIAAETRYGNAEATAAAFASAHHVVALDLVNQRLAPLSLEPRSVLAAFDTTSQRLTIRMSTQMPSGVRD SVCDALGMAKEQLRVVVGDVGGGFGMKTGVYPEDVAVAFCARALQRPVKWVADRSEEFVSSTHGRDLQSHAELALDEHGK ILGLRLASLANVGAYATGAGVVIQLMIGPWVQTSVYDIQTIDFHFRAVLTNTAPTSAYRGAGRPEAIFTIERLMDEAARQ TGIDRIELRRRNFIQPTQMPYKNPMGQTYDTGRFESVMDQALVLADWQGFDARAAESARRGLLRGLGIATFLEWTGGNAL EESVTVEIKAPTSGTDGIIEVFSAVNAMGQGIATSLAQLVVDAFGVPMDKVRIVLGDTDRGNGFGSAGSRSLFTGGSAVR IGAERTIDKARQLAAKEFEAAEQDITYADGSFKVAGTDLSIDLFALAARQSDQRIFMDSTTAVAGPSWPNGCHICEVEVD PQTGHVAVVAYASVNDVGRVVNPMIVRGQLDGGAVQGIGQALCEHLVYDRETGQPLTGSLMDYAAPRADNAPDFKTELDP STPCLNNPLGVKGVGELGTIGAGPTVVNAVADALARRGMAAQARQLQMPLSPSRLWHLMQG
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI71773480, Length=783, Percent_Identity=25.0319284802043, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI91823271, Length=759, Percent_Identity=24.5059288537549, Blast_Score=147, Evalue=4e-35, Organism=Escherichia coli, GI1789246, Length=772, Percent_Identity=27.0725388601036, Blast_Score=227, Evalue=3e-60, Organism=Escherichia coli, GI1789230, Length=777, Percent_Identity=27.6705276705277, Blast_Score=221, Evalue=1e-58, Organism=Escherichia coli, GI1786478, Length=720, Percent_Identity=25.8333333333333, Blast_Score=140, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17540638, Length=788, Percent_Identity=24.8730964467005, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17539860, Length=803, Percent_Identity=24.159402241594, Blast_Score=155, Evalue=7e-38, Organism=Caenorhabditis elegans, GI32566215, Length=596, Percent_Identity=24.6644295302013, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI24647193, Length=786, Percent_Identity=23.9185750636132, Blast_Score=127, Evalue=4e-29, Organism=Drosophila melanogaster, GI24647195, Length=781, Percent_Identity=24.7119078104994, Blast_Score=119, Evalue=1e-26, Organism=Drosophila melanogaster, GI17737937, Length=739, Percent_Identity=24.4925575101488, Blast_Score=116, Evalue=6e-26, Organism=Drosophila melanogaster, GI24647197, Length=803, Percent_Identity=24.4084682440847, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI24647199, Length=730, Percent_Identity=23.1506849315068, Blast_Score=113, Evalue=5e-25, Organism=Drosophila melanogaster, GI24647201, Length=794, Percent_Identity=22.7959697732997, Blast_Score=104, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 82806; Mature: 82674
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETQPAQINPSRFGSGQSVRRLEDDALLAGAGQYTDDLTLPGQTQLFFVRSPYPHARIV CCCCCCCCCCHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEE SLDTAAALAMPGVLQVVTGADLVAAGVKPIPGASGFTRADGSPCAAPPRRALAHERVRFV EECHHHHHHCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GEAVAAVVAQTLQQARDAAEAIAVDYEELPMVVDMNDAMAPGAPVLCPEAPDNIAAETRY HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCCEECCCCCCCCCCCCCC GNAEATAAAFASAHHVVALDLVNQRLAPLSLEPRSVLAAFDTTSQRLTIRMSTQMPSGVR CCCHHHHHHHHHCCCEEEEEHHHCCCCCCCCCHHHHHEEECCCCCEEEEEEECCCCCCHH DSVCDALGMAKEQLRVVVGDVGGGFGMKTGVYPEDVAVAFCARALQRPVKWVADRSEEFV HHHHHHHHHCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH SSTHGRDLQSHAELALDEHGKILGLRLASLANVGAYATGAGVVIQLMIGPWVQTSVYDIQ HHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEE TIDFHFRAVLTNTAPTSAYRGAGRPEAIFTIERLMDEAARQTGIDRIELRRRNFIQPTQM EECEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC PYKNPMGQTYDTGRFESVMDQALVLADWQGFDARAAESARRGLLRGLGIATFLEWTGGNA CCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCHHHHEEECCCCC LEESVTVEIKAPTSGTDGIIEVFSAVNAMGQGIATSLAQLVVDAFGVPMDKVRIVLGDTD CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHEEEEECCCC RGNGFGSAGSRSLFTGGSAVRIGAERTIDKARQLAAKEFEAAEQDITYADGSFKVAGTDL CCCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCC SIDLFALAARQSDQRIFMDSTTAVAGPSWPNGCHICEVEVDPQTGHVAVVAYASVNDVGR CEEHHHHHHCCCCCEEEEECCCEECCCCCCCCCEEEEEEECCCCCCEEEEEEECHHHHHH VVNPMIVRGQLDGGAVQGIGQALCEHLVYDRETGQPLTGSLMDYAAPRADNAPDFKTELD HHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC PSTPCLNNPLGVKGVGELGTIGAGPTVVNAVADALARRGMAAQARQLQMPLSPSRLWHLM CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH QG CC >Mature Secondary Structure TETQPAQINPSRFGSGQSVRRLEDDALLAGAGQYTDDLTLPGQTQLFFVRSPYPHARIV CCCCCCCCCHHHCCCCCHHHHHCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCEEE SLDTAAALAMPGVLQVVTGADLVAAGVKPIPGASGFTRADGSPCAAPPRRALAHERVRFV EECHHHHHHCCCHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH GEAVAAVVAQTLQQARDAAEAIAVDYEELPMVVDMNDAMAPGAPVLCPEAPDNIAAETRY HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEECCCCCCCCCCEECCCCCCCCCCCCCC GNAEATAAAFASAHHVVALDLVNQRLAPLSLEPRSVLAAFDTTSQRLTIRMSTQMPSGVR CCCHHHHHHHHHCCCEEEEEHHHCCCCCCCCCHHHHHEEECCCCCEEEEEEECCCCCCHH DSVCDALGMAKEQLRVVVGDVGGGFGMKTGVYPEDVAVAFCARALQRPVKWVADRSEEFV HHHHHHHHHCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH SSTHGRDLQSHAELALDEHGKILGLRLASLANVGAYATGAGVVIQLMIGPWVQTSVYDIQ HHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEEE TIDFHFRAVLTNTAPTSAYRGAGRPEAIFTIERLMDEAARQTGIDRIELRRRNFIQPTQM EECEEEEEEEECCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCC PYKNPMGQTYDTGRFESVMDQALVLADWQGFDARAAESARRGLLRGLGIATFLEWTGGNA CCCCCCCCCCCCCHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHCCHHHHEEECCCCC LEESVTVEIKAPTSGTDGIIEVFSAVNAMGQGIATSLAQLVVDAFGVPMDKVRIVLGDTD CCCCEEEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHEEEEECCCC RGNGFGSAGSRSLFTGGSAVRIGAERTIDKARQLAAKEFEAAEQDITYADGSFKVAGTDL CCCCCCCCCCCCEECCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEECCCC SIDLFALAARQSDQRIFMDSTTAVAGPSWPNGCHICEVEVDPQTGHVAVVAYASVNDVGR CEEHHHHHHCCCCCEEEEECCCEECCCCCCCCCEEEEEEECCCCCCEEEEEEECHHHHHH VVNPMIVRGQLDGGAVQGIGQALCEHLVYDRETGQPLTGSLMDYAAPRADNAPDFKTELD HHCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC PSTPCLNNPLGVKGVGELGTIGAGPTVVNAVADALARRGMAAQARQLQMPLSPSRLWHLM CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHH QG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]