| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789199
Identifier: 91789199
GI number: 91789199
Start: 3540287
End: 3540814
Strand: Reverse
Name: 91789199
Synonym: Bpro_3343
Alternate gene names: NA
Gene position: 3540814-3540287 (Counterclockwise)
Preceding gene: 91789200
Following gene: 91789198
Centisome position: 68.09
GC content: 61.17
Gene sequence:
>528_bases ATGCCCATTGATACGACCGACCCGTCCCCCCTGATGCCCTATCAATTCCCGAACCCGGCGGCTGCCTTGCCGGAGATCGT GGTCCAGCACGCCATTCCGACCGATGAGCGGCTGTGGGTTCCGCAAGCTGAAAACGTGTGGTTCCGCCCGCTGTGCCTGA ATGCCAGCCAGGGCTACTGGATGAATTTGCTGCGCGTGCGCAAGTCCGGCGTGCTCAGCCGCCACCGCCATCCGCAGGCC GTGCACGGCTTTGTGCTCAAGGGCCGCTGGCGTTACCTGGAGCACGACTGGGAGGCCACCGAAGGCAGCTATGTGTTTGA GCCGCCGGGCGAGACCCACACGCTCTACGTGCCTGAAGACGTGGAAGAAATGATCACCTACTTCCAGGTCAATGGCGTCA TGTACTACACCGACCCCTGGGGCAAAGGCATGGGCTACGAAGACGTGTTCACCAAGATCGAGATGTGCAACAAGCATTTC GAGAGCGTCGGGCTGGGCGCTGACTACACCAAGCAGTTCATCCGCTGA
Upstream 100 bases:
>100_bases CAAAATTCAGAGTAAACCCTTGAATTGATGCGCCATGTCGCCGGTAAAATGACCACTATATAGTCAGTATGTCCACAATA TGGATATTTAGGAGACTTGC
Downstream 100 bases:
>100_bases GCATGGCTTACGCAACAGCGCAGTACGACTTTGCGGGCAGCGTGGCGGTGGTCACGGGCGGTGCCAGCGGCGTTGGTGCC GAGGTGGCGCGGCAGCTGCA
Product: cupin 2 barrel-domain containing protein
Products: NA
Alternate protein names: Cupin 2 Barrel; 2 4-Dihydroxyacetophenone Dioxygenase; Cupin 2 Conserved Barrel; Cupin 2 Protein; Cupin 2 Conserved Barrel Domain Protein
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPIDTTDPSPLMPYQFPNPAAALPEIVVQHAIPTDERLWVPQAENVWFRPLCLNASQGYWMNLLRVRKSGVLSRHRHPQA VHGFVLKGRWRYLEHDWEATEGSYVFEPPGETHTLYVPEDVEEMITYFQVNGVMYYTDPWGKGMGYEDVFTKIEMCNKHF ESVGLGADYTKQFIR
Sequences:
>Translated_175_residues MPIDTTDPSPLMPYQFPNPAAALPEIVVQHAIPTDERLWVPQAENVWFRPLCLNASQGYWMNLLRVRKSGVLSRHRHPQA VHGFVLKGRWRYLEHDWEATEGSYVFEPPGETHTLYVPEDVEEMITYFQVNGVMYYTDPWGKGMGYEDVFTKIEMCNKHF ESVGLGADYTKQFIR >Mature_174_residues PIDTTDPSPLMPYQFPNPAAALPEIVVQHAIPTDERLWVPQAENVWFRPLCLNASQGYWMNLLRVRKSGVLSRHRHPQAV HGFVLKGRWRYLEHDWEATEGSYVFEPPGETHTLYVPEDVEEMITYFQVNGVMYYTDPWGKGMGYEDVFTKIEMCNKHFE SVGLGADYTKQFIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20352; Mature: 20221
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIDTTDPSPLMPYQFPNPAAALPEIVVQHAIPTDERLWVPQAENVWFRPLCLNASQGYW CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCHH MNLLRVRKSGVLSRHRHPQAVHGFVLKGRWRYLEHDWEATEGSYVFEPPGETHTLYVPED HHHHHHHHHHHHHHCCCCCHHHEEEEECEEEEECCCCCCCCCCEEECCCCCEEEEECCCC VEEMITYFQVNGVMYYTDPWGKGMGYEDVFTKIEMCNKHFESVGLGADYTKQFIR HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC >Mature Secondary Structure PIDTTDPSPLMPYQFPNPAAALPEIVVQHAIPTDERLWVPQAENVWFRPLCLNASQGYW CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEEEECCCCCHH MNLLRVRKSGVLSRHRHPQAVHGFVLKGRWRYLEHDWEATEGSYVFEPPGETHTLYVPED HHHHHHHHHHHHHHCCCCCHHHEEEEECEEEEECCCCCCCCCCEEECCCCCEEEEECCCC VEEMITYFQVNGVMYYTDPWGKGMGYEDVFTKIEMCNKHFESVGLGADYTKQFIR HHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA