| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789178
Identifier: 91789178
GI number: 91789178
Start: 3516731
End: 3518002
Strand: Reverse
Name: 91789178
Synonym: Bpro_3322
Alternate gene names: NA
Gene position: 3518002-3516731 (Counterclockwise)
Preceding gene: 91789180
Following gene: 91789177
Centisome position: 67.65
GC content: 59.04
Gene sequence:
>1272_bases ATGCACACTCATACCCGCAGACATACCTTGAAAGCTATCGGCGCAGGTGCGCTTGCCGGATTCGGCATTGCACCAGCCTT TGCCCAGAACCGCCCCCTGAAGATCGGCGTGATTGCGCCGCGGGGCGGCGTTGCGGGCACGGTTGGTGAATGCGGGCTCC GAGGACTGCAATGGACTGCCGAGAAGCTCAACGCCGGCAACGGAATCGGCGGGCGCAAGATCGAGTTGGTCATTGAAGAG GAGACGAGCCCTAAAGACTCGATCGAACGCTTCCGCAAACTGGTGCTGCAGGACAAGGTGGATTGTGTTCAGGGCGTCGT ATCCACCGGTGTCAGCCTGGCCCTGGCCCCGGCAGCTGAAGACAGCCGCATGATCACTATCTTCTGGGACGGAACTACCC AGGACGGTGTCAAGGAAACCATGCCCAATCCGCGCTACGTGTTCCGCAGCAACGACAACGAGTGCGAGGCTGTGATGGCA TCGCTTCTGGCCATCAAATATTTCAAGGGGCAGTTCAAGACGATCGCGGGTATCAACCCCGATTACTCGTACGGCCGTAA CAACTGGGCCGCATTTCAGGCGCTCCTCAAGAAGTTCGGCATTGAACACACCGTCGTGTCCGAGCAATGGTCCAAGGTTG GAAATCTTGATCTGACCTCCAACGTTGCGGTCCTGAAAGCGGCCAAGCCGGACCTGATTTTCTCATCCTTGCTGTTTGCT GATCTGCCCGTCTTCATGAAGCAGGCACATGCCGCCGGGCTGACGTCGAACACCAAATTCGTCCTGCCCGCCGCCGGATG GCAGCACACCGGTCTCAAAAAGGACTCCATGCCCGAGGGTGTGATTTTCGGGCACAACACGCTCTATTTCGATCACCCGC AGGCGAGCCCCGTTCAGCGCGAATTCGTTGACTGGTACGTGAACAGATTCAAGGACTATCCTCACTGGGAGGCCGACCGC GCGTATTTCTCGCTCATGGTCTACAAAGCGGGCGTCGAGAAGGCACTCGCCGCCAAGTCGGGGAGCTGGCCCTCAATGAC GGATATTGCCGCGTCCATGGCTGGCGTCGAAGTGCAATCGCTAGGCGGACGCGGGGGCATGCGAAGCGACCACATCGCCA ACCAGACATACCACCAGGGCCTGTCCACCAACAACAACCGCTATGACTTCACCACGCTCGCCCGGGTGGACAGCATGTAC TCCGACCAGATCCAGAAGCCCGCAGGCGCGGACTTCTGGGAGTGGCTGAAGACTTCGAGCTTCAAGGTTTAG
Upstream 100 bases:
>100_bases CTGGCTTGATGAACCTCAATATAGGGTATGCACTAATGCGTTATGATATATCAGGCGGATATTATAAGTCGATCAACAGG AGATTAACGTGGAGATCGAC
Downstream 100 bases:
>100_bases GCGGATATTCGATGAGTGGCTACGCCAATATTCTGTTGGCCGGCGTGTTTCATGCCGCCGTGCTTTTTCTGGTTGCCTCC GGTCTGCAGCTCATCTTTGG
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MHTHTRRHTLKAIGAGALAGFGIAPAFAQNRPLKIGVIAPRGGVAGTVGECGLRGLQWTAEKLNAGNGIGGRKIELVIEE ETSPKDSIERFRKLVLQDKVDCVQGVVSTGVSLALAPAAEDSRMITIFWDGTTQDGVKETMPNPRYVFRSNDNECEAVMA SLLAIKYFKGQFKTIAGINPDYSYGRNNWAAFQALLKKFGIEHTVVSEQWSKVGNLDLTSNVAVLKAAKPDLIFSSLLFA DLPVFMKQAHAAGLTSNTKFVLPAAGWQHTGLKKDSMPEGVIFGHNTLYFDHPQASPVQREFVDWYVNRFKDYPHWEADR AYFSLMVYKAGVEKALAAKSGSWPSMTDIAASMAGVEVQSLGGRGGMRSDHIANQTYHQGLSTNNNRYDFTTLARVDSMY SDQIQKPAGADFWEWLKTSSFKV
Sequences:
>Translated_423_residues MHTHTRRHTLKAIGAGALAGFGIAPAFAQNRPLKIGVIAPRGGVAGTVGECGLRGLQWTAEKLNAGNGIGGRKIELVIEE ETSPKDSIERFRKLVLQDKVDCVQGVVSTGVSLALAPAAEDSRMITIFWDGTTQDGVKETMPNPRYVFRSNDNECEAVMA SLLAIKYFKGQFKTIAGINPDYSYGRNNWAAFQALLKKFGIEHTVVSEQWSKVGNLDLTSNVAVLKAAKPDLIFSSLLFA DLPVFMKQAHAAGLTSNTKFVLPAAGWQHTGLKKDSMPEGVIFGHNTLYFDHPQASPVQREFVDWYVNRFKDYPHWEADR AYFSLMVYKAGVEKALAAKSGSWPSMTDIAASMAGVEVQSLGGRGGMRSDHIANQTYHQGLSTNNNRYDFTTLARVDSMY SDQIQKPAGADFWEWLKTSSFKV >Mature_423_residues MHTHTRRHTLKAIGAGALAGFGIAPAFAQNRPLKIGVIAPRGGVAGTVGECGLRGLQWTAEKLNAGNGIGGRKIELVIEE ETSPKDSIERFRKLVLQDKVDCVQGVVSTGVSLALAPAAEDSRMITIFWDGTTQDGVKETMPNPRYVFRSNDNECEAVMA SLLAIKYFKGQFKTIAGINPDYSYGRNNWAAFQALLKKFGIEHTVVSEQWSKVGNLDLTSNVAVLKAAKPDLIFSSLLFA DLPVFMKQAHAAGLTSNTKFVLPAAGWQHTGLKKDSMPEGVIFGHNTLYFDHPQASPVQREFVDWYVNRFKDYPHWEADR AYFSLMVYKAGVEKALAAKSGSWPSMTDIAASMAGVEVQSLGGRGGMRSDHIANQTYHQGLSTNNNRYDFTTLARVDSMY SDQIQKPAGADFWEWLKTSSFKV
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 46463; Mature: 46463
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTHTRRHTLKAIGAGALAGFGIAPAFAQNRPLKIGVIAPRGGVAGTVGECGLRGLQWTA CCCCHHHHHHHHHCCHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCHHHH EKLNAGNGIGGRKIELVIEEETSPKDSIERFRKLVLQDKVDCVQGVVSTGVSLALAPAAE HHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC DSRMITIFWDGTTQDGVKETMPNPRYVFRSNDNECEAVMASLLAIKYFKGQFKTIAGINP CCEEEEEEECCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHEEECCCC DYSYGRNNWAAFQALLKKFGIEHTVVSEQWSKVGNLDLTSNVAVLKAAKPDLIFSSLLFA CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH DLPVFMKQAHAAGLTSNTKFVLPAAGWQHTGLKKDSMPEGVIFGHNTLYFDHPQASPVQR HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHH EFVDWYVNRFKDYPHWEADRAYFSLMVYKAGVEKALAAKSGSWPSMTDIAASMAGVEVQS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH LGGRGGMRSDHIANQTYHQGLSTNNNRYDFTTLARVDSMYSDQIQKPAGADFWEWLKTSS CCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC FKV CCC >Mature Secondary Structure MHTHTRRHTLKAIGAGALAGFGIAPAFAQNRPLKIGVIAPRGGVAGTVGECGLRGLQWTA CCCCHHHHHHHHHCCHHHHHCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHCCCCCHHHH EKLNAGNGIGGRKIELVIEEETSPKDSIERFRKLVLQDKVDCVQGVVSTGVSLALAPAAE HHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC DSRMITIFWDGTTQDGVKETMPNPRYVFRSNDNECEAVMASLLAIKYFKGQFKTIAGINP CCEEEEEEECCCCCCCHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCHHEEECCCC DYSYGRNNWAAFQALLKKFGIEHTVVSEQWSKVGNLDLTSNVAVLKAAKPDLIFSSLLFA CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHH DLPVFMKQAHAAGLTSNTKFVLPAAGWQHTGLKKDSMPEGVIFGHNTLYFDHPQASPVQR HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCEEEEECCCCCHHHH EFVDWYVNRFKDYPHWEADRAYFSLMVYKAGVEKALAAKSGSWPSMTDIAASMAGVEVQS HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHH LGGRGGMRSDHIANQTYHQGLSTNNNRYDFTTLARVDSMYSDQIQKPAGADFWEWLKTSS CCCCCCCCCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC FKV CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]