| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livH [C]
Identifier: 91789177
GI number: 91789177
Start: 3515838
End: 3516719
Strand: Reverse
Name: livH [C]
Synonym: Bpro_3321
Alternate gene names: 91789177
Gene position: 3516719-3515838 (Counterclockwise)
Preceding gene: 91789178
Following gene: 91789176
Centisome position: 67.63
GC content: 61.22
Gene sequence:
>882_bases ATGAGTGGCTACGCCAATATTCTGTTGGCCGGCGTGTTTCATGCCGCCGTGCTTTTTCTGGTTGCCTCCGGTCTGCAGCT CATCTTTGGCGTGCAGCGCATCGTCAACCTGGCCTGCGGCTCGATCTACGCCCTCGGCGCCTACGCTGGAATAGCGGCTA CGCACTGGGCTCTTTCCATCGGCTTGCCGCCGCCCTGGTTCCCGCTCGCGCTGCTGGGGGCGGGCCTTGCCGTCGGTCTG GTAGGCATCCCGTTGGAAAGGCTGCTGCGCACCATTTATGGTCGGCAGGAGTCGTTCCAGCTGCTTCTTACTTTCGCCTT GGTCCTGATGATCCAGGACACCCTCCGGTTTTTCTGGGGGGCGAACCCGCAGCAGCTGGGAAACCTTTCCATGTTGTACG GCACCCTCGCCATCGGGGAGGTTTCCATGCCGCTGTACAACGCCTGCGTTATAGGCGCTGCAATTGGCCTGGCAGCAGCG ATGGCATTTTTCCTCGGGCACACCCGGTGGGGCAAGATTGTTCGGGCAACTGCGGAAAACCGTGACGCCAGTGCCGCGAT GGGCGTCAACGTGCAATTGGTCTACCTGGTTGTCTTCACGCTGGGCACCATGCTCGGTACTGTCGGCGGCGCCCTTGTGG CACCGACAGCAGCGGCGTCACTGGAAATGGGTGTCGAACTCGTGGTAGAGGCTTTTGCCGTCGTCGTAATCGGTGGTCTC GGAAGCATGAAAGGTGCGGCGGTGGGTGCGCTAATCGCAGGTCTCGTGCGGGCGGCAGCGGTGACGGTGTATCCAGAGGC GGAAATACTTGCCATCTACGCAATCGTACTTGTCGTGCTGGTCTGGAAGCCCGCAGGCCTCTTCGGAAAGGTAGCCACCT GA
Upstream 100 bases:
>100_bases GGGTGGACAGCATGTACTCCGACCAGATCCAGAAGCCCGCAGGCGCGGACTTCTGGGAGTGGCTGAAGACTTCGAGCTTC AAGGTTTAGGCGGATATTCG
Downstream 100 bases:
>100_bases TGCTTCAATCTCTCACTGCCTCCATTTGGGGCGCGCCAACCGCGTCTCCACGGCGCTGGACGAAGGTCATTTTTGCCGTG CTCGTGGCTGCTCTCTTCCT
Product: inner-membrane translocator
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: Branched-Chain Amino Acid ABC Transporter Permease Protein; ABC Transporter Permease Protein; ABC-Transporter; Branched-Chain Amino Acid ABC Transporter Permease; ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter; Branched Chain Amino Acid ABC Transporter Permease; Branched Chain Amino Acid ABC Transporter; ABC-Type Transport System Permease Protein; Permease Component Of ABC Transporter Protein; Branched-Chain Amino Acid Transport System Permease; Amino Acid ABC Transporter Permease; Amino Acid/Amide ABC Transporter Membrane HAAT Family; Permease Component Of ABC Transporter
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MSGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWFPLALLGAGLAVGL VGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAA MAFFLGHTRWGKIVRATAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT
Sequences:
>Translated_293_residues MSGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWFPLALLGAGLAVGL VGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAA MAFFLGHTRWGKIVRATAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT >Mature_292_residues SGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSIGLPPPWFPLALLGAGLAVGLV GIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWGANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAM AFFLGHTRWGKIVRATAENRDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGLG SMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT
Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]
COG id: COG0559
COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789866, Length=281, Percent_Identity=23.4875444839858, Blast_Score=65, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30301; Mature: 30169
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC GLPPPWFPLALLGAGLAVGLVGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWG CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC ANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAMAFFLGHTRWGKIVRATAEN CCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC RDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT CCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SGYANILLAGVFHAAVLFLVASGLQLIFGVQRIVNLACGSIYALGAYAGIAATHWALSI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC GLPPPWFPLALLGAGLAVGLVGIPLERLLRTIYGRQESFQLLLTFALVLMIQDTLRFFWG CCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC ANPQQLGNLSMLYGTLAIGEVSMPLYNACVIGAAIGLAAAMAFFLGHTRWGKIVRATAEN CCHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCC RDASAAMGVNVQLVYLVVFTLGTMLGTVGGALVAPTAAASLEMGVELVVEAFAVVVIGGL CCCCHHCCCCHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC GSMKGAAVGALIAGLVRAAAVTVYPEAEILAIYAIVLVVLVWKPAGLFGKVAT CCCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA