Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91789146

Identifier: 91789146

GI number: 91789146

Start: 3482172

End: 3483005

Strand: Reverse

Name: 91789146

Synonym: Bpro_3286

Alternate gene names: NA

Gene position: 3483005-3482172 (Counterclockwise)

Preceding gene: 91789147

Following gene: 91789135

Centisome position: 66.98

GC content: 58.51

Gene sequence:

>834_bases
ATGAATAAAAAAGTAGTAATTACCTCTGCCCTTGCGGTTTGGTTTTCATTACTTCCCTTATGCCGGGCGCAGTCTGCCTT
GGCGGTACCCAATCTGGCGCAGCCACTTGCTGCGCCCTTGCATCCCTGGCAAGCGGCGTTGCCCCGGCTGACTGCTGAGG
CCTATTTCACCAACCTGCAGGACGGCGCGAAAATCGAAACGCCGTTTCGCATGACTTTCGGGTTGGCGGGTGGCTGGGGG
CTGGCGCCCATCAGCAAGCCCATCGCAGGAAAAAGCGGCCACCACCACTTGCTGGTCAATCGCGAACTGCCGCTCGACTT
CAAGCAGGCCCTGCCTTTCAATGACCAGTACATCCACTTTGGCAAGGGGCAGATGGAGACGGTGCTGAACCTGGCGCCAG
GCGTCTATTCGCTGCGGCTGCTGCTGGCCGATAACAAGCACCTGCCGCATTTCGTCTACAGCAAGCCCTTGAATATCACG
GTGACGCGCCACAACAAGGACGTGGACCCCAAGAGCCTTGTCAAAAAAGGCATCAGCCTGCTCAACATGGCGCCGGATGC
GCGGCTGAAGTCGCCTTTCAGGGTGCAATTTCAGGCTTCCGGGCTCAACGTCGCTCATCTGAGCCAAAAAGAAAAGGACA
CCGGCCATTTTCGGCTGACGCTGACGCCTCAGGGTGGCCTCAAGCCGGCGGAAATGAATTTTGCCAATGGCCAGTCCGAG
GTATGGCTGGCGCCGCCGAGCGGTGCCTACACCCTGAAGCTGGACTTCATGGACAACGTCAACCCGGGAAAAACACTGGT
TGAGCCGGTATCGGTGCCTGTGCGGGTGGAGTAG

Upstream 100 bases:

>100_bases
GGATTGAGGCCGTGGGGGCCGATATGTATACTTATGGGTCAAAATCAGTCGGCTCAATGTTAGTAAATCGTATGAAAGTG
GCGGGTACTTGAGGGAATAA

Downstream 100 bases:

>100_bases
CGCGGGTGGAGTAGCGCAGGCTCAACCGGCCAGTGCTGCCTTGACCGCGGCAGACACCTGGCCCATGTCGGCCTTGCCCG
CCAGCCGGGTCTTCACGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MNKKVVITSALAVWFSLLPLCRAQSALAVPNLAQPLAAPLHPWQAALPRLTAEAYFTNLQDGAKIETPFRMTFGLAGGWG
LAPISKPIAGKSGHHHLLVNRELPLDFKQALPFNDQYIHFGKGQMETVLNLAPGVYSLRLLLADNKHLPHFVYSKPLNIT
VTRHNKDVDPKSLVKKGISLLNMAPDARLKSPFRVQFQASGLNVAHLSQKEKDTGHFRLTLTPQGGLKPAEMNFANGQSE
VWLAPPSGAYTLKLDFMDNVNPGKTLVEPVSVPVRVE

Sequences:

>Translated_277_residues
MNKKVVITSALAVWFSLLPLCRAQSALAVPNLAQPLAAPLHPWQAALPRLTAEAYFTNLQDGAKIETPFRMTFGLAGGWG
LAPISKPIAGKSGHHHLLVNRELPLDFKQALPFNDQYIHFGKGQMETVLNLAPGVYSLRLLLADNKHLPHFVYSKPLNIT
VTRHNKDVDPKSLVKKGISLLNMAPDARLKSPFRVQFQASGLNVAHLSQKEKDTGHFRLTLTPQGGLKPAEMNFANGQSE
VWLAPPSGAYTLKLDFMDNVNPGKTLVEPVSVPVRVE
>Mature_277_residues
MNKKVVITSALAVWFSLLPLCRAQSALAVPNLAQPLAAPLHPWQAALPRLTAEAYFTNLQDGAKIETPFRMTFGLAGGWG
LAPISKPIAGKSGHHHLLVNRELPLDFKQALPFNDQYIHFGKGQMETVLNLAPGVYSLRLLLADNKHLPHFVYSKPLNIT
VTRHNKDVDPKSLVKKGISLLNMAPDARLKSPFRVQFQASGLNVAHLSQKEKDTGHFRLTLTPQGGLKPAEMNFANGQSE
VWLAPPSGAYTLKLDFMDNVNPGKTLVEPVSVPVRVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30399; Mature: 30399

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKVVITSALAVWFSLLPLCRAQSALAVPNLAQPLAAPLHPWQAALPRLTAEAYFTNLQ
CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
DGAKIETPFRMTFGLAGGWGLAPISKPIAGKSGHHHLLVNRELPLDFKQALPFNDQYIHF
CCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEE
GKGQMETVLNLAPGVYSLRLLLADNKHLPHFVYSKPLNITVTRHNKDVDPKSLVKKGISL
CCCHHHHHHHHCCCHHEEEEEEECCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHH
LNMAPDARLKSPFRVQFQASGLNVAHLSQKEKDTGHFRLTLTPQGGLKPAEMNFANGQSE
CCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCE
VWLAPPSGAYTLKLDFMDNVNPGKTLVEPVSVPVRVE
EEEECCCCEEEEEEEECCCCCCCCEEECCCCCCEEEC
>Mature Secondary Structure
MNKKVVITSALAVWFSLLPLCRAQSALAVPNLAQPLAAPLHPWQAALPRLTAEAYFTNLQ
CCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
DGAKIETPFRMTFGLAGGWGLAPISKPIAGKSGHHHLLVNRELPLDFKQALPFNDQYIHF
CCCEECCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCEEEE
GKGQMETVLNLAPGVYSLRLLLADNKHLPHFVYSKPLNITVTRHNKDVDPKSLVKKGISL
CCCHHHHHHHHCCCHHEEEEEEECCCCCCEEEECCCEEEEEEECCCCCCHHHHHHHHHHH
LNMAPDARLKSPFRVQFQASGLNVAHLSQKEKDTGHFRLTLTPQGGLKPAEMNFANGQSE
CCCCCCCCCCCCEEEEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCE
VWLAPPSGAYTLKLDFMDNVNPGKTLVEPVSVPVRVE
EEEECCCCEEEEEEEECCCCCCCCEEECCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA