Click here to switch to the map view.

The map label for this gene is pdtaR [H]

Identifier: 91789135

GI number: 91789135

Start: 3467784

End: 3469076

Strand: Reverse

Name: pdtaR [H]

Synonym: Bpro_3275

Alternate gene names: 91789135

Gene position: 3469076-3467784 (Counterclockwise)

Preceding gene: 91789146

Following gene: 91789134

Centisome position: 66.71

GC content: 64.58

Gene sequence:

>1293_bases
ATGACTTCCGCATTGGTACATTTGAACGGCCCGCCGGGTGCGCATCCGCTGGCTTCTGACCTTGAGGCCGCCGGAATACA
GGTCCTTGGCTGCGTTGGGGAGTGCAGCAAACTGGTGCAGGAGGCACTGCGGCACGCACCAGATGTGGTGATTTGCTATG
ACCCTCTGCCGGATGAGGAATTGTTCAGGGCCCTGCAGGTCATTGGCGAGACCTCGTCGCGCCCGGTGATCGTGTTTACC
AGCGATGGGGACGCCGAGAAGATCACCCGGGCCGTGGCTGCGGGCGTTCATGCCTACGTCATCAATGGCTATGGCCCGCA
GCGCCTGCGCTCGCTCATTCATCTGGCGCAGGCCCGCTTCAGCCGCGAGCAGGCTCTGCGGGCGGAAATGTTTGAAGTGT
CGCGCCGCCTGGAAGAGCGCAAGGTGGTGGACCGAGCCAAGGGCATCCTGATGCGCGCGCGCCAGGTCTCGGACGATGAT
GCGTTCCAGATGCTGCGCACCGCTTCCATGCACACCAACCAGCGCCTGGGCCAGGTGTCGCAGCACATCATCCATTCGGC
CCGCTTCGCGGAAGACGTCAACCGTTCGGGGCAGTTACGCATGCTGTCGCAGCGGCTGGTGAAGCTGGCCCTGCAGCAAT
TGGCGGGGGTGCAGGTCGCGCAGGCCAAACAGCACCTGAAGGAGTCCGTCCTGCGCATTGACGCAAATATTGTGGCTCTC
GGCAAAAGCCTGTCCCAGCCTACCTTTGGGGACCTGCTGGAGCAGGTAGGCCGGACCTGGGCGCAGCTGAAGCAGGCCTT
GCAGGACGAGCCCCAGGCGCGTCACATGGGCCCGCTCGACGAACTGGCCGAGCAGTTGCTGCACGAAGCCGAGCGGCTGA
CCAGCAGCCTGGAGAACGCGGGTGCCATGCCTCCGTTGCAGGTCCTCAACCTGGCGGGCCGCCAGCGCATGTTGAGCCAG
CGTTTCGCAAAATACGCCTTGCTGGAGGCGATGGGTGGCAAGGCTGCCACGCCACGCTACACCGAGGGCATGGCCGAATC
CCGGGCGGCCTTCGAGCAGGCACTCAAATACCTGAACGAAATCCCCCTCACCAGCGGGGACATCCGCACCTCGTTGGACG
CTGCCGCCGCGTGCTGGGAGCACATGCTGGCCGGTGCCGCACCCGTTGGGCAGGGTGCCCCGGAACTGCTCGAGCGCCTG
GAGCGCCTGGCGGTGGCCAGCGAGGAATTGCTGGGTATCTTCGAGAGGCTGTCGGTGCATTACGAGCGCAGCATGCAGAT
GTTGGTGGGGTAA

Upstream 100 bases:

>100_bases
GGAAGGTGCATGTCGTCGGCGGGGCGACTTTCAGGAGGCGCGACGTGGGCGTCGCACAGGCTGTGTTTTCTTCATATTCC
CTCTTAACCCATTGATTTTT

Downstream 100 bases:

>100_bases
CGGGCATGTTTTATATTGCAGTGCACCAAATTCGGGCATGGGACTTGCTTATGTTGGTGCATGGCATTTGACCTGGACAT
TGGCTTCGCAACGCTTGCGG

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTSALVHLNGPPGAHPLASDLEAAGIQVLGCVGECSKLVQEALRHAPDVVICYDPLPDEELFRALQVIGETSSRPVIVFT
SDGDAEKITRAVAAGVHAYVINGYGPQRLRSLIHLAQARFSREQALRAEMFEVSRRLEERKVVDRAKGILMRARQVSDDD
AFQMLRTASMHTNQRLGQVSQHIIHSARFAEDVNRSGQLRMLSQRLVKLALQQLAGVQVAQAKQHLKESVLRIDANIVAL
GKSLSQPTFGDLLEQVGRTWAQLKQALQDEPQARHMGPLDELAEQLLHEAERLTSSLENAGAMPPLQVLNLAGRQRMLSQ
RFAKYALLEAMGGKAATPRYTEGMAESRAAFEQALKYLNEIPLTSGDIRTSLDAAAACWEHMLAGAAPVGQGAPELLERL
ERLAVASEELLGIFERLSVHYERSMQMLVG

Sequences:

>Translated_430_residues
MTSALVHLNGPPGAHPLASDLEAAGIQVLGCVGECSKLVQEALRHAPDVVICYDPLPDEELFRALQVIGETSSRPVIVFT
SDGDAEKITRAVAAGVHAYVINGYGPQRLRSLIHLAQARFSREQALRAEMFEVSRRLEERKVVDRAKGILMRARQVSDDD
AFQMLRTASMHTNQRLGQVSQHIIHSARFAEDVNRSGQLRMLSQRLVKLALQQLAGVQVAQAKQHLKESVLRIDANIVAL
GKSLSQPTFGDLLEQVGRTWAQLKQALQDEPQARHMGPLDELAEQLLHEAERLTSSLENAGAMPPLQVLNLAGRQRMLSQ
RFAKYALLEAMGGKAATPRYTEGMAESRAAFEQALKYLNEIPLTSGDIRTSLDAAAACWEHMLAGAAPVGQGAPELLERL
ERLAVASEELLGIFERLSVHYERSMQMLVG
>Mature_429_residues
TSALVHLNGPPGAHPLASDLEAAGIQVLGCVGECSKLVQEALRHAPDVVICYDPLPDEELFRALQVIGETSSRPVIVFTS
DGDAEKITRAVAAGVHAYVINGYGPQRLRSLIHLAQARFSREQALRAEMFEVSRRLEERKVVDRAKGILMRARQVSDDDA
FQMLRTASMHTNQRLGQVSQHIIHSARFAEDVNRSGQLRMLSQRLVKLALQQLAGVQVAQAKQHLKESVLRIDANIVALG
KSLSQPTFGDLLEQVGRTWAQLKQALQDEPQARHMGPLDELAEQLLHEAERLTSSLENAGAMPPLQVLNLAGRQRMLSQR
FAKYALLEAMGGKAATPRYTEGMAESRAAFEQALKYLNEIPLTSGDIRTSLDAAAACWEHMLAGAAPVGQGAPELLERLE
RLAVASEELLGIFERLSVHYERSMQMLVG

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47247; Mature: 47116

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSALVHLNGPPGAHPLASDLEAAGIQVLGCVGECSKLVQEALRHAPDVVICYDPLPDEE
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
LFRALQVIGETSSRPVIVFTSDGDAEKITRAVAAGVHAYVINGYGPQRLRSLIHLAQARF
HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH
SREQALRAEMFEVSRRLEERKVVDRAKGILMRARQVSDDDAFQMLRTASMHTNQRLGQVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QHIIHSARFAEDVNRSGQLRMLSQRLVKLALQQLAGVQVAQAKQHLKESVLRIDANIVAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHH
GKSLSQPTFGDLLEQVGRTWAQLKQALQDEPQARHMGPLDELAEQLLHEAERLTSSLENA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC
GAMPPLQVLNLAGRQRMLSQRFAKYALLEAMGGKAATPRYTEGMAESRAAFEQALKYLNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IPLTSGDIRTSLDAAAACWEHMLAGAAPVGQGAPELLERLERLAVASEELLGIFERLSVH
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YERSMQMLVG
HHHHHHHHCC
>Mature Secondary Structure 
TSALVHLNGPPGAHPLASDLEAAGIQVLGCVGECSKLVQEALRHAPDVVICYDPLPDEE
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHH
LFRALQVIGETSSRPVIVFTSDGDAEKITRAVAAGVHAYVINGYGPQRLRSLIHLAQARF
HHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH
SREQALRAEMFEVSRRLEERKVVDRAKGILMRARQVSDDDAFQMLRTASMHTNQRLGQVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
QHIIHSARFAEDVNRSGQLRMLSQRLVKLALQQLAGVQVAQAKQHLKESVLRIDANIVAL
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHH
GKSLSQPTFGDLLEQVGRTWAQLKQALQDEPQARHMGPLDELAEQLLHEAERLTSSLENA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHC
GAMPPLQVLNLAGRQRMLSQRFAKYALLEAMGGKAATPRYTEGMAESRAAFEQALKYLNE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IPLTSGDIRTSLDAAAACWEHMLAGAAPVGQGAPELLERLERLAVASEELLGIFERLSVH
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YERSMQMLVG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]