| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is cheY [H]
Identifier: 91789131
GI number: 91789131
Start: 3463372
End: 3463743
Strand: Direct
Name: cheY [H]
Synonym: Bpro_3271
Alternate gene names: 91789131
Gene position: 3463372-3463743 (Clockwise)
Preceding gene: 91789130
Following gene: 91789132
Centisome position: 66.6
GC content: 58.06
Gene sequence:
>372_bases ATGCGACTGTTAATCGTTGACGACTCCAACATGATCCGGACCCGCATCTCGCGGGTGGTCCAGAACGGCGGCCTCAAGGG CGTTGTGCTCGCAGGCCTTGCCAAGAATGGCGTGGAGGCTGTGCGCATTGCCAAGGCCACGCATCCCGAGGTGGTCACCA TGGACCTGACCATGCCCGAAATGGACGGCATCGAATGCATTCAGGCCCTGCTGAAGTTCGATCCGAAGATCAACATTCTG GTGGTCAGCGCACTGAGCGACAAATCAACCGCGATCCAGGCGCTCAAGCTGGGTGCGCGCGGCTTTGTTGCCAAACCTTT TACCGACGAAGAGCTGCAAATTGCATTGCTTGACGTTGCCGATGCCCGCTAA
Upstream 100 bases:
>100_bases TTGATCTGGATTGAAGTCCCTAAGGGGCTGTGCTTGCTCGGGGCGGCCCGGCGCGGCGCACTGTGGCCCCCACAGAAAAA CCACAAAGAGGAGTAGCACC
Downstream 100 bases:
>100_bases GGAGAGCTTTGTGGCCACGCTCAACGAAACCGACCTCAAACTGTTCATTGACTCCATCAGGCATTACCTGAAAGTCACCA CCCGGCAAGAACCCCAGATC
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MRLLIVDDSNMIRTRISRVVQNGGLKGVVLAGLAKNGVEAVRIAKATHPEVVTMDLTMPEMDGIECIQALLKFDPKINIL VVSALSDKSTAIQALKLGARGFVAKPFTDEELQIALLDVADAR
Sequences:
>Translated_123_residues MRLLIVDDSNMIRTRISRVVQNGGLKGVVLAGLAKNGVEAVRIAKATHPEVVTMDLTMPEMDGIECIQALLKFDPKINIL VVSALSDKSTAIQALKLGARGFVAKPFTDEELQIALLDVADAR >Mature_123_residues MRLLIVDDSNMIRTRISRVVQNGGLKGVVLAGLAKNGVEAVRIAKATHPEVVTMDLTMPEMDGIECIQALLKFDPKINIL VVSALSDKSTAIQALKLGARGFVAKPFTDEELQIALLDVADAR
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheY seems to regulate the clockwise (CW) rotation [H]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1788550, Length=113, Percent_Identity=34.5132743362832, Blast_Score=76, Evalue=7e-16, Organism=Escherichia coli, GI1790299, Length=118, Percent_Identity=28.8135593220339, Blast_Score=59, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 13254; Mature: 13254
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLIVDDSNMIRTRISRVVQNGGLKGVVLAGLAKNGVEAVRIAKATHPEVVTMDLTMPE CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCEEEEEECCCC MDGIECIQALLKFDPKINILVVSALSDKSTAIQALKLGARGFVAKPFTDEELQIALLDVA CCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCEEEEEEEEC DAR CCC >Mature Secondary Structure MRLLIVDDSNMIRTRISRVVQNGGLKGVVLAGLAKNGVEAVRIAKATHPEVVTMDLTMPE CEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHEEEEECCCCCCEEEEEECCCC MDGIECIQALLKFDPKINILVVSALSDKSTAIQALKLGARGFVAKPFTDEELQIALLDVA CCCHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEECCCCCCCEEEEEEEEC DAR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550470; 10360571; 9521117 [H]