| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91789132
Identifier: 91789132
GI number: 91789132
Start: 3463733
End: 3464212
Strand: Direct
Name: 91789132
Synonym: Bpro_3272
Alternate gene names: NA
Gene position: 3463733-3464212 (Clockwise)
Preceding gene: 91789131
Following gene: 91789133
Centisome position: 66.61
GC content: 58.13
Gene sequence:
>480_bases ATGCCCGCTAAGGAGAGCTTTGTGGCCACGCTCAACGAAACCGACCTCAAACTGTTCATTGACTCCATCAGGCATTACCT GAAAGTCACCACCCGGCAAGAACCCCAGATCACCTCGGCCTTTCTCGGGACGGGGGATGTTGAAGGCTTTGAATTCAACG GCCTCGTCACTTTTTCAGGCAGCCACAATGGCCATGTCATCGTGTCGATGCCGGCCAAACTGGTGCGCGAAATTTTGCTG CTGCAGCACGAGACCGACCTGAGCGACAGCAACCTGCTGGACGCTGTCGGCGAAATCGCCAACACACTGGCCGGCAATGC CCGCAAGGCCCTGGGACCGGAACTCCAGATATCGGTTCCGATCAAGCTGCACGGCGTGCAAGGCATCAAAGCCAGGGTGC GCAAGCATCCGTACGTGATCACCCTGAGCTGGAACCACTACGAGGCCCTGGTGTCCGTGGACATGGAACGCAGGCACTGA
Upstream 100 bases:
>100_bases AAATCAACCGCGATCCAGGCGCTCAAGCTGGGTGCGCGCGGCTTTGTTGCCAAACCTTTTACCGACGAAGAGCTGCAAAT TGCATTGCTTGACGTTGCCG
Downstream 100 bases:
>100_bases AAAACACTAAACACCCCCACGCTTGCCGCTTGTGAGCTGCGCTGGCCTCGCTGGCCGCGCCCACATGCACGCAATATGTG CAACGCACCAAAAGAAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPAKESFVATLNETDLKLFIDSIRHYLKVTTRQEPQITSAFLGTGDVEGFEFNGLVTFSGSHNGHVIVSMPAKLVREILL LQHETDLSDSNLLDAVGEIANTLAGNARKALGPELQISVPIKLHGVQGIKARVRKHPYVITLSWNHYEALVSVDMERRH
Sequences:
>Translated_159_residues MPAKESFVATLNETDLKLFIDSIRHYLKVTTRQEPQITSAFLGTGDVEGFEFNGLVTFSGSHNGHVIVSMPAKLVREILL LQHETDLSDSNLLDAVGEIANTLAGNARKALGPELQISVPIKLHGVQGIKARVRKHPYVITLSWNHYEALVSVDMERRH >Mature_158_residues PAKESFVATLNETDLKLFIDSIRHYLKVTTRQEPQITSAFLGTGDVEGFEFNGLVTFSGSHNGHVIVSMPAKLVREILLL QHETDLSDSNLLDAVGEIANTLAGNARKALGPELQISVPIKLHGVQGIKARVRKHPYVITLSWNHYEALVSVDMERRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17638; Mature: 17507
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKESFVATLNETDLKLFIDSIRHYLKVTTRQEPQITSAFLGTGDVEGFEFNGLVTFSG CCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEECCEEEECC SHNGHVIVSMPAKLVREILLLQHETDLSDSNLLDAVGEIANTLAGNARKALGPELQISVP CCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEEEEEE IKLHGVQGIKARVRKHPYVITLSWNHYEALVSVDMERRH EEEECCCCHHHHHHCCCEEEEEECCCEEEEEEEECCCCC >Mature Secondary Structure PAKESFVATLNETDLKLFIDSIRHYLKVTTRQEPQITSAFLGTGDVEGFEFNGLVTFSG CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEECCEEEECC SHNGHVIVSMPAKLVREILLLQHETDLSDSNLLDAVGEIANTLAGNARKALGPELQISVP CCCCEEEEECCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEEEEEE IKLHGVQGIKARVRKHPYVITLSWNHYEALVSVDMERRH EEEECCCCHHHHHHCCCEEEEEECCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA