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The map label for this gene is pdtaR [H]

Identifier: 91789126

GI number: 91789126

Start: 3456838

End: 3457470

Strand: Direct

Name: pdtaR [H]

Synonym: Bpro_3266

Alternate gene names: 91789126

Gene position: 3456838-3457470 (Clockwise)

Preceding gene: 91789124

Following gene: 91789127

Centisome position: 66.47

GC content: 60.98

Gene sequence:

>633_bases
ATGTCATCGCCCCAATCCCTGCGTCTTGTTGTGATCGCGCCGGATTTGTCCACATCCGACGCAGCAGATGAGGTCGCCCT
GGCGCTGATCGAACGCTCACGCCAGTTGCGTATTGGCTTGCTCGAAAACGGTTACAACATCGTGGCTGTGTTGCCGGCTG
ACGCCTTTCTCCACGAGCGGTTGGCCCAGCTGCAGCCTGACATGATCATTGTGGACGCCGAGAGCGAGGCCCGCGACTCA
CTGGAACATGTGGTCATGGCCACCCGCGACGAGCGGCGCCCCATTGTGCTGTTCACCAACGACAACGACACCACACATGT
GAAAGACGCCGTGGCTGCGGGCGTGTCCGCCTATATCGTGGCGGGCCTCTCACCCGACCGGATACGCCCCATTCTGGACG
TCGCCATGGCGCGTTTTGAATACGAACAGAACCTCAGGCGCGAGTTGGCACATGCCAAAACCGAGCTGCAGGACCGCAAG
GTCATCGACCGGGCGAAAGGAATATTGATGCAGCGCCAGGGTCTTTCCGAGCAGGCAGCCTATGAAAAGCTGCGTAAAGC
CGCGATGGATAAGGGCCTGCGCCTTGGCGAAGTGGCGCAGCGCATGCTGGACCTGGCCGAGCTGCTGGGCTGA

Upstream 100 bases:

>100_bases
TAAGGTTGAGCGCTTTCCCGGGCCTGGAGAAGGACCTTCCTGTCGCGAAAACGGGAACAGCCGGCCCGCAATCTGGCGCG
AATCTTGCACGTCACAGGAC

Downstream 100 bases:

>100_bases
CGCGCAGCCAACCCCAAATGGTGCAGCGCACAAATTAGGTGCGGACCCGTAAAAATGCACCACACACCCTTTCAGCACCC
TCCTGCGCTACCAATAACGT

Product: response regulator receiver/ANTAR domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 209

Protein sequence:

>210_residues
MSSPQSLRLVVIAPDLSTSDAADEVALALIERSRQLRIGLLENGYNIVAVLPADAFLHERLAQLQPDMIIVDAESEARDS
LEHVVMATRDERRPIVLFTNDNDTTHVKDAVAAGVSAYIVAGLSPDRIRPILDVAMARFEYEQNLRRELAHAKTELQDRK
VIDRAKGILMQRQGLSEQAAYEKLRKAAMDKGLRLGEVAQRMLDLAELLG

Sequences:

>Translated_210_residues
MSSPQSLRLVVIAPDLSTSDAADEVALALIERSRQLRIGLLENGYNIVAVLPADAFLHERLAQLQPDMIIVDAESEARDS
LEHVVMATRDERRPIVLFTNDNDTTHVKDAVAAGVSAYIVAGLSPDRIRPILDVAMARFEYEQNLRRELAHAKTELQDRK
VIDRAKGILMQRQGLSEQAAYEKLRKAAMDKGLRLGEVAQRMLDLAELLG
>Mature_209_residues
SSPQSLRLVVIAPDLSTSDAADEVALALIERSRQLRIGLLENGYNIVAVLPADAFLHERLAQLQPDMIIVDAESEARDSL
EHVVMATRDERRPIVLFTNDNDTTHVKDAVAAGVSAYIVAGLSPDRIRPILDVAMARFEYEQNLRRELAHAKTELQDRKV
IDRAKGILMQRQGLSEQAAYEKLRKAAMDKGLRLGEVAQRMLDLAELLG

Specific function: Member of the two-component regulatory system pdtaR/pdtaS [H]

COG id: COG3707

COG function: function code T; Response regulator with putative antiterminator output domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005561
- InterPro:   IPR011006
- InterPro:   IPR008327
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03861 ANTAR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23335; Mature: 23204

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50921 ANTAR ; PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPQSLRLVVIAPDLSTSDAADEVALALIERSRQLRIGLLENGYNIVAVLPADAFLHER
CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHH
LAQLQPDMIIVDAESEARDSLEHVVMATRDERRPIVLFTNDNDTTHVKDAVAAGVSAYIV
HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCHHHHEE
AGLSPDRIRPILDVAMARFEYEQNLRRELAHAKTELQDRKVIDRAKGILMQRQGLSEQAA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YEKLRKAAMDKGLRLGEVAQRMLDLAELLG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SSPQSLRLVVIAPDLSTSDAADEVALALIERSRQLRIGLLENGYNIVAVLPADAFLHER
CCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEEECCCHHHHHHH
LAQLQPDMIIVDAESEARDSLEHVVMATRDERRPIVLFTNDNDTTHVKDAVAAGVSAYIV
HHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCHHHHEE
AGLSPDRIRPILDVAMARFEYEQNLRRELAHAKTELQDRKVIDRAKGILMQRQGLSEQAA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
YEKLRKAAMDKGLRLGEVAQRMLDLAELLG
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]