Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is nrtA [H]

Identifier: 91789127

GI number: 91789127

Start: 3457852

End: 3459096

Strand: Direct

Name: nrtA [H]

Synonym: Bpro_3267

Alternate gene names: 91789127

Gene position: 3457852-3459096 (Clockwise)

Preceding gene: 91789126

Following gene: 91789128

Centisome position: 66.49

GC content: 60.4

Gene sequence:

>1245_bases
ATGACTGAACTGCTGAAATCTTCATTGACACGCCGCACGGTTCTTCAGGCCGCCGCAGTAGGTGCCGTCGGCATCAACCC
GGCACTGCGCGCCGCCGTGTATGCCCAGGGTTCCGACGCCCCGGAAAAGAAGGAAGTGAAGATCGGCTTCATCCCGCTGA
CCGATTGCGCCTCGGTGGTCATGGCCTCGGTACTGGGCATTGACCAGAAATACGGCGTCAAGATCATTCCCACCAAGGAA
GCCAGCTGGGCCGGCGTGCGTGACAAGCTGGTCAACGGCGAGCTCGACTTCGCCCACGTGCTCTACGGCCTGATTTACGG
CGTGCACATGGGCACGGCCGGCCCCAAGAAGGACATGGCCGTTCTGATGACCCTCAACAACAACGGCCAGGCCATCACAC
TGTCCAAAAAGCTGGCAGACAAGGGTGCCGTCGACGGTGCGGGCCTGGCCAAGCTGATGGCCAGCGAAAAACGCGAGTAC
ACCTTCGCCCAGACCTTCCCCACCGGCACGCACGCCATGTGGCTGTACTACTGGCTGGCCGCCAACGGCATCAATCCGAT
GAAGGATGCCAAAGTCATCACCGTGCCGCCGCCGCAGATGGTCGCGAACATGCGCGTGGGCAATATGGACGGCTTTTGCG
TGGGCGAACCCTGGGGCCACCGCGCCATCATGGACGGCATCGGCATCACCGCCGTGACGACGCAGGACATCTGGAAAGAT
CACCCTGAAAAAGTGCTGGGCACCACGGCAGAGTTCACCAAAAAATACCCCAACACCACACGGGCTGTGACGGCCGCGAT
CATCGAAGCCGGCAAATGGATTGACGCCAGCCTGACCAACAAAAACAAGATGGCCGAGACCGTAGCCGACAAGGCCTACG
TCAACACCAGCGTGGACGCCATCAACCAGCGCATTTTGGGCCGCTACCAGAATGGCATGGGCAAGACCTGGGATGACCCG
AACTACATGAAGTTTTTCAATGACGGCGCGGTCAACTTCCCCTACCTCTCCGACGGCATGTGGTTCCTCACGCAGCACAA
GCGCTGGGGTCTGATCAAGGACCACCCCGACTACCTGGCCGTGGCCAAACAGATCAACCAGATCGACATCTACAAGCAGG
CCGCAGCGGCGGCCAAGGTCAGCGTTCCGAAAGACGTGATGCGCACCAGCAAGCTGATCGACGGCACGGTATGGGACGGC
AAGGATCCGAAAAAGTACGCCGATGGCTTCAAGGTCCGCGCCTGA

Upstream 100 bases:

>100_bases
CCCGCATTCACGTTTCCGACGTGATGCCCGGGTCGAGCGCCTTTTTTGTTTTCCGAATGTTGTTTTTGCTTTTTTATTTT
TATTTTCTGGAGACGCTGAC

Downstream 100 bases:

>100_bases
AATAGCCGCCGAGCATTCATCAATATCCCACCAAAGGACGTGACACCATGGTCAGTGCCGTATTCCACAATCCGCTGGAC
GCCGCAGCAGCGCCAGCCGC

Product: twin-arginine translocation pathway signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MTELLKSSLTRRTVLQAAAVGAVGINPALRAAVYAQGSDAPEKKEVKIGFIPLTDCASVVMASVLGIDQKYGVKIIPTKE
ASWAGVRDKLVNGELDFAHVLYGLIYGVHMGTAGPKKDMAVLMTLNNNGQAITLSKKLADKGAVDGAGLAKLMASEKREY
TFAQTFPTGTHAMWLYYWLAANGINPMKDAKVITVPPPQMVANMRVGNMDGFCVGEPWGHRAIMDGIGITAVTTQDIWKD
HPEKVLGTTAEFTKKYPNTTRAVTAAIIEAGKWIDASLTNKNKMAETVADKAYVNTSVDAINQRILGRYQNGMGKTWDDP
NYMKFFNDGAVNFPYLSDGMWFLTQHKRWGLIKDHPDYLAVAKQINQIDIYKQAAAAAKVSVPKDVMRTSKLIDGTVWDG
KDPKKYADGFKVRA

Sequences:

>Translated_414_residues
MTELLKSSLTRRTVLQAAAVGAVGINPALRAAVYAQGSDAPEKKEVKIGFIPLTDCASVVMASVLGIDQKYGVKIIPTKE
ASWAGVRDKLVNGELDFAHVLYGLIYGVHMGTAGPKKDMAVLMTLNNNGQAITLSKKLADKGAVDGAGLAKLMASEKREY
TFAQTFPTGTHAMWLYYWLAANGINPMKDAKVITVPPPQMVANMRVGNMDGFCVGEPWGHRAIMDGIGITAVTTQDIWKD
HPEKVLGTTAEFTKKYPNTTRAVTAAIIEAGKWIDASLTNKNKMAETVADKAYVNTSVDAINQRILGRYQNGMGKTWDDP
NYMKFFNDGAVNFPYLSDGMWFLTQHKRWGLIKDHPDYLAVAKQINQIDIYKQAAAAAKVSVPKDVMRTSKLIDGTVWDG
KDPKKYADGFKVRA
>Mature_413_residues
TELLKSSLTRRTVLQAAAVGAVGINPALRAAVYAQGSDAPEKKEVKIGFIPLTDCASVVMASVLGIDQKYGVKIIPTKEA
SWAGVRDKLVNGELDFAHVLYGLIYGVHMGTAGPKKDMAVLMTLNNNGQAITLSKKLADKGAVDGAGLAKLMASEKREYT
FAQTFPTGTHAMWLYYWLAANGINPMKDAKVITVPPPQMVANMRVGNMDGFCVGEPWGHRAIMDGIGITAVTTQDIWKDH
PEKVLGTTAEFTKKYPNTTRAVTAAIIEAGKWIDASLTNKNKMAETVADKAYVNTSVDAINQRILGRYQNGMGKTWDDPN
YMKFFNDGAVNFPYLSDGMWFLTQHKRWGLIKDHPDYLAVAKQINQIDIYKQAAAAAKVSVPKDVMRTSKLIDGTVWDGK
DPKKYADGFKVRA

Specific function: Essential component of the nitrate-transporting system. May be the substrate-binding protein [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CmpA/NrtA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006311 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45256; Mature: 45125

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELLKSSLTRRTVLQAAAVGAVGINPALRAAVYAQGSDAPEKKEVKIGFIPLTDCASVV
CHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHH
MASVLGIDQKYGVKIIPTKEASWAGVRDKLVNGELDFAHVLYGLIYGVHMGTAGPKKDMA
HHHHHCCCHHCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE
VLMTLNNNGQAITLSKKLADKGAVDGAGLAKLMASEKREYTFAQTFPTGTHAMWLYYWLA
EEEEECCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHH
ANGINPMKDAKVITVPPPQMVANMRVGNMDGFCVGEPWGHRAIMDGIGITAVTTQDIWKD
HCCCCCCCCCEEEEECCHHHHHCCEECCCCCEEECCCCCCHHHHCCCCEEEEEHHHHHHC
HPEKVLGTTAEFTKKYPNTTRAVTAAIIEAGKWIDASLTNKNKMAETVADKAYVNTSVDA
CCHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCHHHH
INQRILGRYQNGMGKTWDDPNYMKFFNDGAVNFPYLSDGMWFLTQHKRWGLIKDHPDYLA
HHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHH
VAKQINQIDIYKQAAAAAKVSVPKDVMRTSKLIDGTVWDGKDPKKYADGFKVRA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCEECC
>Mature Secondary Structure 
TELLKSSLTRRTVLQAAAVGAVGINPALRAAVYAQGSDAPEKKEVKIGFIPLTDCASVV
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHH
MASVLGIDQKYGVKIIPTKEASWAGVRDKLVNGELDFAHVLYGLIYGVHMGTAGPKKDMA
HHHHHCCCHHCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCEE
VLMTLNNNGQAITLSKKLADKGAVDGAGLAKLMASEKREYTFAQTFPTGTHAMWLYYWLA
EEEEECCCCCEEEEEHHHCCCCCCCCHHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHH
ANGINPMKDAKVITVPPPQMVANMRVGNMDGFCVGEPWGHRAIMDGIGITAVTTQDIWKD
HCCCCCCCCCEEEEECCHHHHHCCEECCCCCEEECCCCCCHHHHCCCCEEEEEHHHHHHC
HPEKVLGTTAEFTKKYPNTTRAVTAAIIEAGKWIDASLTNKNKMAETVADKAYVNTSVDA
CCHHHHCCCHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCCHHHH
INQRILGRYQNGMGKTWDDPNYMKFFNDGAVNFPYLSDGMWFLTQHKRWGLIKDHPDYLA
HHHHHHHHHHCCCCCCCCCCCHHEEECCCCCCCCEECCCEEEEEECCCCCCCCCCCHHHH
VAKQINQIDIYKQAAAAAKVSVPKDVMRTSKLIDGTVWDGKDPKKYADGFKVRA
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]