| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is livK [C]
Identifier: 91789123
GI number: 91789123
Start: 3453753
End: 3455018
Strand: Reverse
Name: livK [C]
Synonym: Bpro_3263
Alternate gene names: 91789123
Gene position: 3455018-3453753 (Counterclockwise)
Preceding gene: 91789125
Following gene: 91789122
Centisome position: 66.44
GC content: 63.74
Gene sequence:
>1266_bases ATGCAAAAACTCTTGAGACGCGTCGCGCTGGCCCTATGTCTGGGCACTGCATTGGCCGCCCAGGCGCAGCCGGCTGTCCA GCCGCCGGTGCGGATCGCGCTCATCGAGAGCCTCTCCGGGCCCTTCGCCAACACCGGTGAAGCGGTGTTCCGCAACCTGG TCTGGGCTACCGAGCGCGTCAATGCGCGCGGCGGCGTCAAGCTGCCCGGCGGTGCGCGCAACCTGGCGGTCGAGCGCTAC GACAACAAGGGGCAGAACGAGGAGGCCCTGGCGGCGTTGCGTTCGGCCATCGATGACGGCGTGACGGTGATCGCGCAGGG CAATTCGTCGGCCATAGCGGCAACGCTGATTGATGCCATCAACAAGCACAACGAGCGTGAGCCGGGCAAGCGCGTGCTGT TCCTGAACTATTCGGCGGTCGATCCCATCCTGACGAACGAAAAGTGCAGCTACTGGCATTTCCGTTTTGATGCCCACGCC GACATGCGCATGGCGGCCCTGATGGATGTGCTCAAGGATGACAAGGCGGTCAAAAGCGTCTACCTGATCGGCCAGGACTA CAGCTTTGGCCAGGCGGTGCTGCGTGAGGCCCGCAAGCAGCTTGGCGCGCAGCGTCCCGATGTGCAGATCGTCGGGGACG AGTTGCATGCGCTGGGGCGGGTGAAGGACTTCATTCCTTACGCCGTGAAAATCAAGGCCAGCGGCGCGCAGGCGGTGCTG ACCGGGAACTGGGGCAATGACCTGACACTGCTCATCAAGGCCGCGAAGGAAGTGGGTTATGAGGGCAAGTTCTATACCTT CTATGGCAATGCGCTGGGCGTGCCGGCGGCGCTGGGCGATGCCGGCGTGGGCAAGGTGATTGCGGTGGCGGACTGGTTTC CCAACGAACCCGGCGATGCGTCCGAGATTTTCTACCAGGCGTTTCGCCAGCGCTTTCCCAGGCCGCAGGATGACTATGTG CACATGCGCATGCAGCTGATGATGGAGGCGTTTGCCCAGGGTCTTGAAAGGGCTGGCTCGACGGAGTCGGGCGCCGTGGC TGCACAGCTTGAGCGGGCCGCCGTGGCTGTGTCAGGTCACAAGGGCGCGATGCGTGCGGCCGACCACCAGTTCCAGCAGC CGCTGTTGGTGGCGATGATGGGTAAGCAGGGCGCACCCGGTGTCAAATTTGACGTCGAGGGGTCGGGTTACGGTTTTCGT GTTATCAAGACCATCGCGCCCGAGCGGGCCGAGCAGCCGCACAGCTGCAAGATGGTGCGGCCCTGA
Upstream 100 bases:
>100_bases GTTTCCCCTTACACTGCGCGGCGTTCACCATGATTGCCGCATGCTCATCAATTAGGTGTACGGACGATTTATTCAAGCGA AAACCGGGATGTATTTATTC
Downstream 100 bases:
>100_bases TCCAGTCGCCCCCATCCCCGTTCCCCCGTCCGGTGAGCCGGCGCAACAGGTCCATCCATTGAATTAAAGGGCAAGCATGA GACAGGCAGTAGTGAATCTT
Product: putative transporter signal peptide protein
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MQKLLRRVALALCLGTALAAQAQPAVQPPVRIALIESLSGPFANTGEAVFRNLVWATERVNARGGVKLPGGARNLAVERY DNKGQNEEALAALRSAIDDGVTVIAQGNSSAIAATLIDAINKHNEREPGKRVLFLNYSAVDPILTNEKCSYWHFRFDAHA DMRMAALMDVLKDDKAVKSVYLIGQDYSFGQAVLREARKQLGAQRPDVQIVGDELHALGRVKDFIPYAVKIKASGAQAVL TGNWGNDLTLLIKAAKEVGYEGKFYTFYGNALGVPAALGDAGVGKVIAVADWFPNEPGDASEIFYQAFRQRFPRPQDDYV HMRMQLMMEAFAQGLERAGSTESGAVAAQLERAAVAVSGHKGAMRAADHQFQQPLLVAMMGKQGAPGVKFDVEGSGYGFR VIKTIAPERAEQPHSCKMVRP
Sequences:
>Translated_421_residues MQKLLRRVALALCLGTALAAQAQPAVQPPVRIALIESLSGPFANTGEAVFRNLVWATERVNARGGVKLPGGARNLAVERY DNKGQNEEALAALRSAIDDGVTVIAQGNSSAIAATLIDAINKHNEREPGKRVLFLNYSAVDPILTNEKCSYWHFRFDAHA DMRMAALMDVLKDDKAVKSVYLIGQDYSFGQAVLREARKQLGAQRPDVQIVGDELHALGRVKDFIPYAVKIKASGAQAVL TGNWGNDLTLLIKAAKEVGYEGKFYTFYGNALGVPAALGDAGVGKVIAVADWFPNEPGDASEIFYQAFRQRFPRPQDDYV HMRMQLMMEAFAQGLERAGSTESGAVAAQLERAAVAVSGHKGAMRAADHQFQQPLLVAMMGKQGAPGVKFDVEGSGYGFR VIKTIAPERAEQPHSCKMVRP >Mature_421_residues MQKLLRRVALALCLGTALAAQAQPAVQPPVRIALIESLSGPFANTGEAVFRNLVWATERVNARGGVKLPGGARNLAVERY DNKGQNEEALAALRSAIDDGVTVIAQGNSSAIAATLIDAINKHNEREPGKRVLFLNYSAVDPILTNEKCSYWHFRFDAHA DMRMAALMDVLKDDKAVKSVYLIGQDYSFGQAVLREARKQLGAQRPDVQIVGDELHALGRVKDFIPYAVKIKASGAQAVL TGNWGNDLTLLIKAAKEVGYEGKFYTFYGNALGVPAALGDAGVGKVIAVADWFPNEPGDASEIFYQAFRQRFPRPQDDYV HMRMQLMMEAFAQGLERAGSTESGAVAAQLERAAVAVSGHKGAMRAADHQFQQPLLVAMMGKQGAPGVKFDVEGSGYGFR VIKTIAPERAEQPHSCKMVRP
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=351, Percent_Identity=22.7920227920228, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000709 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45623; Mature: 45623
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKLLRRVALALCLGTALAAQAQPAVQPPVRIALIESLSGPFANTGEAVFRNLVWATERV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHHC NARGGVKLPGGARNLAVERYDNKGQNEEALAALRSAIDDGVTVIAQGNSSAIAATLIDAI CCCCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH NKHNEREPGKRVLFLNYSAVDPILTNEKCSYWHFRFDAHADMRMAALMDVLKDDKAVKSV HCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHEEE YLIGQDYSFGQAVLREARKQLGAQRPDVQIVGDELHALGRVKDFIPYAVKIKASGAQAVL EEEECCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCEEEEEEECCCEEEE TGNWGNDLTLLIKAAKEVGYEGKFYTFYGNALGVPAALGDAGVGKVIAVADWFPNEPGDA ECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHCCCCCCCCEEEEEECCCCCCCCH SEIFYQAFRQRFPRPQDDYVHMRMQLMMEAFAQGLERAGSTESGAVAAQLERAAVAVSGH HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCC KGAMRAADHQFQQPLLVAMMGKQGAPGVKFDVEGSGYGFRVIKTIAPERAEQPHSCKMVR CCCHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCCEEEEEHHCCHHCCCCCCCCCCC P C >Mature Secondary Structure MQKLLRRVALALCLGTALAAQAQPAVQPPVRIALIESLSGPFANTGEAVFRNLVWATERV CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHCCCCCCCCHHHHHHHHHHHHHHC NARGGVKLPGGARNLAVERYDNKGQNEEALAALRSAIDDGVTVIAQGNSSAIAATLIDAI CCCCCEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH NKHNEREPGKRVLFLNYSAVDPILTNEKCSYWHFRFDAHADMRMAALMDVLKDDKAVKSV HCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHEEE YLIGQDYSFGQAVLREARKQLGAQRPDVQIVGDELHALGRVKDFIPYAVKIKASGAQAVL EEEECCCCHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHCCEEEEEEECCCEEEE TGNWGNDLTLLIKAAKEVGYEGKFYTFYGNALGVPAALGDAGVGKVIAVADWFPNEPGDA ECCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHCCCCCCCCEEEEEECCCCCCCCH SEIFYQAFRQRFPRPQDDYVHMRMQLMMEAFAQGLERAGSTESGAVAAQLERAAVAVSGH HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEEECCC KGAMRAADHQFQQPLLVAMMGKQGAPGVKFDVEGSGYGFRVIKTIAPERAEQPHSCKMVR CCCHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCCEEEEEHHCCHHCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA