| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is nuoA [H]
Identifier: 91789116
GI number: 91789116
Start: 3446758
End: 3447117
Strand: Reverse
Name: nuoA [H]
Synonym: Bpro_3256
Alternate gene names: 91789116
Gene position: 3447117-3446758 (Counterclockwise)
Preceding gene: 91789117
Following gene: 91789115
Centisome position: 66.29
GC content: 54.17
Gene sequence:
>360_bases ATGAACCTCGATCAATACCTTCCTGTTCTCCTGTTTATTCTGGTCGGTGTGGGTGTCGGTGTGGTGCCCCAAGTGCTGGG TCGTTTGCTGGGCCCGGTGCGTCCCGACAGCGAAAAAAATTCCCCCTACGAGTGCGGCTTCGAAGCTTTCGAGGATGCCC GCATGAAATTCGATGTGCGCTACTACCTGATCGCCATCCTCTTCATTCTTTTTGACCTCGAAATCGCGTTCCTCTTTCCC TGGGCGGTTGCGCTCAAGGAGGTTGGTTCGGTGGGTTTCTGGTCGGTCATGATTTTCCTGGGCATTCTGGTCGTGGGCTT TGTCTACGAGTGGAAAAAGGGTGCGCTGGACTGGGAATAA
Upstream 100 bases:
>100_bases GATTGACAAGCATCGGCAGCGGCGCTTTGGGCGAAGCTGTCGGGGCAAACGGCAGGCTGAAATAAACCGCGCAGGTGGCT TTTCAGAAGTTGAATCCACG
Downstream 100 bases:
>100_bases GAAAAGATCCCGAGGGTTCTTCGCGACGAGGTCGCCACCAAATCCACCAAATAAGGTACGGGTATGTCACTTGAAGGTGT TTTCAACGAAGGCTTCATGA
Product: NADH-ubiquinone/plastoquinone oxidoreductase subunit 3
Products: NA
Alternate protein names: NADH dehydrogenase I subunit A; NDH-1 subunit A; NUO1 [H]
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MNLDQYLPVLLFILVGVGVGVVPQVLGRLLGPVRPDSEKNSPYECGFEAFEDARMKFDVRYYLIAILFILFDLEIAFLFP WAVALKEVGSVGFWSVMIFLGILVVGFVYEWKKGALDWE
Sequences:
>Translated_119_residues MNLDQYLPVLLFILVGVGVGVVPQVLGRLLGPVRPDSEKNSPYECGFEAFEDARMKFDVRYYLIAILFILFDLEIAFLFP WAVALKEVGSVGFWSVMIFLGILVVGFVYEWKKGALDWE >Mature_119_residues MNLDQYLPVLLFILVGVGVGVVPQVLGRLLGPVRPDSEKNSPYECGFEAFEDARMKFDVRYYLIAILFILFDLEIAFLFP WAVALKEVGSVGFWSVMIFLGILVVGFVYEWKKGALDWE
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG0838
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 3 (chain A)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788625, Length=117, Percent_Identity=34.1880341880342, Blast_Score=84, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023043 - InterPro: IPR000440 [H]
Pfam domain/function: PF00507 Oxidored_q4 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 13526; Mature: 13526
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDQYLPVLLFILVGVGVGVVPQVLGRLLGPVRPDSEKNSPYECGFEAFEDARMKFDVR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YYLIAILFILFDLEIAFLFPWAVALKEVGSVGFWSVMIFLGILVVGFVYEWKKGALDWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNLDQYLPVLLFILVGVGVGVVPQVLGRLLGPVRPDSEKNSPYECGFEAFEDARMKFDVR CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH YYLIAILFILFDLEIAFLFPWAVALKEVGSVGFWSVMIFLGILVVGFVYEWKKGALDWE HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA